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@nathandunn
Last active October 29, 2018 19:19
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Example of a proposed bioschemas example
{
"@context": [
"http://schema.org",
"http://bioschemas.org/context.jsonld"
],
"@id": "http://www.alliancegenome.org/gene/ZFIN:ZDB-GENE-001103-2",
"@type": ["BioChemEntity", "Gene"],
"identifier": "ZFIN:ZDB-GENE-001103-2",
"version": "1.8",
"license": "CC BY 4.0",
"typeUrl": "http://www.sequenceontology.org/browser/current_svn/term/SO:0000704",
"name": "sox9b",
"url": "https://www.alliancegenome.org/gene/ZFIN:ZDB-GENE-001103-2",
"alternateName": [
"fb18d01",
"Wu:fb18d01",
"SRY (sex determining region Y)-box 9b"
],
"isContainedIn": {
"@type": "Organism",
"identifier": "NCBI:txid7955",
"name": "Danio rerio",
"alternateNames": ["Zebrafish"],
"url": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=7955"
},
"description": "SRY (sex determining region Y)-box 9b: Predicted to have DNA-binding activity transcription activator activity, RNA polymerase II-specific; involved in several processes, including animal organ development, embryonic morphogenesis, and hepaticobiliary system development; predicted to localize to the nucleus.",
"keywords": "gene ZFIN sox9b fb18d01 wu:fb18d01 Danio rerio ZFIN:ZDB-GENE-001103-2",
"includedInDataCatalog": ["http://www.alliancegenome.org"],
"distribution":[
{
"@type":"DataDownload",
"encodingFormat":"CSV",
"contentUrl":"https://www.alliancegenome.org/downloads"
}
],
"subFeature": {
"@type": "mRNA",
"typeURL": "http://www.sequenceontology.org/browser/current_svn/term/SO:0000234",
"name": "subs-4",
"hasPart": {
"@type": "PropertyValue",
"propertyID": "Sequence",
"value": "Y47D3B.1"
}
},
"creator":{
"@type":"Organization",
"url": "https://www.alliancegenome.org",
"name":"Alliance of Genome Resources",
"contactPoint":{
"@type":"ContactPoint",
"contactType": "customer service",
"email":"alliance-helpdesk@lists.stanford.edu"
}
},
"seeAlso": [
"https://www.ncbi.nlm.nih.gov/gene/60642",
"https://zfin.org/action/marker/citation-list/ZDB-GENE-001103-2"
],
"sameAs": [
"http://www.identifiers.org/ZFIN:ZDB-GENE-001103-2",
"https://zfin.org/ZDB-GENE-001103-2"
],
"additionalProperty":{
"@type":"http://semanticscience.org/resource/SIO/_000983",
"name":"disease association",
"value":{
"@type": ["StructuredValue","MedicalCondition"],
"name":"Leukemia, chronic myeloid (CML)",
"code":{
"@type":"MedicalCode",
"code":"608232",
"codingSystemn":"OMIM"
},
"sameAs":"http://uniprot.org/diseases/DI=03735"
}
}
}
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