Josh L. Espinoza jolespin
jolespin
/ plot_eteTree.py
Created
March 28, 2020 19:29
— forked from fransua/plot_eteTree.py
use matplotlib to draw phylogenetic trees from ETE3
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| from itertools import chain | |
| from matplotlib.collections import LineCollection | |
| from matplotlib import markers | |
| from matplotlib.path import Path | |
| import numpy as np | |
| from ete3 import Tree, NodeStyle |
jolespin
/ lda_gibbs.py
Created
October 5, 2016 23:57
— forked from mblondel/lda_gibbs.py
Latent Dirichlet Allocation with Gibbs sampler
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| """ | |
| (C) Mathieu Blondel - 2010 | |
| License: BSD 3 clause | |
| Implementation of the collapsed Gibbs sampler for | |
| Latent Dirichlet Allocation, as described in | |
| Finding scientifc topics (Griffiths and Steyvers) | |
| """ |