Created
August 5, 2014 08:43
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(partial) EasyBuild log for failed build of /tmp/easybuild-mfkmm8/files_pr956/R-3.1.1-intel-2014b.eb (PR #956)
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| == 2014-08-05 10:43:01,127 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,127 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,128 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,128 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,128 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,128 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,128 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,129 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,129 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,129 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,129 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,129 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,130 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,130 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,130 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,130 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,130 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,130 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,131 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,131 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,131 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,131 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,133 main.EB_R INFO Found file neuRosim_0.2-10.tar.gz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/neuRosim_0.2-10.tar.gz | |
| == 2014-08-05 10:43:01,133 main.EB_R INFO Fetched extension patches: [] | |
| == 2014-08-05 10:43:01,134 main.EB_R DEBUG No patches found for extension neuRosim. | |
| == 2014-08-05 10:43:01,134 main.run DEBUG run_cmd: running cmd which eb (in /tmp/vsc40023/easybuild_build/R/3.1.1/intel-2014b/R-3.1.1) | |
| == 2014-08-05 10:43:01,140 main.run DEBUG cmd "which eb" exited with exitcode 0 and output: | |
| /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2014-08-05 10:43:01,141 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2014-08-05 10:43:01,141 main.easyconfig.tools DEBUG Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2014-08-05 10:43:01,141 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,141 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,141 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,142 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,142 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,142 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,142 main.easyconfig.tools DEBUG Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,142 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,143 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,143 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,143 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,143 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,143 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,144 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,144 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,144 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,144 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,144 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,145 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,145 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,145 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,145 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,145 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,146 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,146 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,146 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,146 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,146 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,146 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,147 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,147 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,147 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,147 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,147 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,149 main.EB_R INFO Found file fastICA_1.2-0.tar.gz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/fastICA_1.2-0.tar.gz | |
| == 2014-08-05 10:43:01,150 main.EB_R INFO Fetched extension patches: [] | |
| == 2014-08-05 10:43:01,150 main.EB_R DEBUG No patches found for extension fastICA. | |
| == 2014-08-05 10:43:01,150 main.run DEBUG run_cmd: running cmd which eb (in /tmp/vsc40023/easybuild_build/R/3.1.1/intel-2014b/R-3.1.1) | |
| == 2014-08-05 10:43:01,156 main.run DEBUG cmd "which eb" exited with exitcode 0 and output: | |
| /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2014-08-05 10:43:01,157 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2014-08-05 10:43:01,157 main.easyconfig.tools DEBUG Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2014-08-05 10:43:01,157 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,157 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,158 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,158 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,158 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,158 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,158 main.easyconfig.tools DEBUG Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,159 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,159 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,159 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,159 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,159 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,159 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,160 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,160 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,160 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,160 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,160 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,161 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,161 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,161 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,161 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,161 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,162 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,162 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,162 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,162 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,162 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,163 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,163 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,163 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,163 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,163 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,163 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,165 main.EB_R INFO Found file R.methodsS3_1.6.1.tar.gz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/R.methodsS3_1.6.1.tar.gz | |
| == 2014-08-05 10:43:01,166 main.EB_R INFO Fetched extension patches: [] | |
| == 2014-08-05 10:43:01,166 main.EB_R DEBUG No patches found for extension R.methodsS3. | |
| == 2014-08-05 10:43:01,166 main.run DEBUG run_cmd: running cmd which eb (in /tmp/vsc40023/easybuild_build/R/3.1.1/intel-2014b/R-3.1.1) | |
| == 2014-08-05 10:43:01,173 main.run DEBUG cmd "which eb" exited with exitcode 0 and output: | |
| /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2014-08-05 10:43:01,173 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2014-08-05 10:43:01,173 main.easyconfig.tools DEBUG Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2014-08-05 10:43:01,173 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,174 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,174 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,174 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,174 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,174 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,175 main.easyconfig.tools DEBUG Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,175 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,175 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,175 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,175 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,176 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,176 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,176 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,176 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,176 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,177 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,177 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,177 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,177 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,177 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,177 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,178 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,178 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,178 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,178 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,178 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,179 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,179 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,179 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,179 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,179 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,179 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,180 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,182 main.EB_R INFO Found file R.oo_1.18.0.tar.gz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/R.oo_1.18.0.tar.gz | |
| == 2014-08-05 10:43:01,182 main.EB_R INFO Fetched extension patches: [] | |
| == 2014-08-05 10:43:01,183 main.EB_R DEBUG No patches found for extension R.oo. | |
| == 2014-08-05 10:43:01,183 main.run DEBUG run_cmd: running cmd which eb (in /tmp/vsc40023/easybuild_build/R/3.1.1/intel-2014b/R-3.1.1) | |
| == 2014-08-05 10:43:01,189 main.run DEBUG cmd "which eb" exited with exitcode 0 and output: | |
| /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2014-08-05 10:43:01,190 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2014-08-05 10:43:01,190 main.easyconfig.tools DEBUG Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2014-08-05 10:43:01,190 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,190 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,190 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,191 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,191 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,191 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,191 main.easyconfig.tools DEBUG Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,191 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,192 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,192 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,192 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,192 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,192 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,193 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,193 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,193 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,193 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,193 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,194 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,194 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,194 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,194 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,194 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,194 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,195 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,195 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,195 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,195 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,195 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,196 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,196 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,196 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,196 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,196 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,203 main.filetools DEBUG Not creating existing path /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R | |
| == 2014-08-05 10:43:01,203 main.EB_R DEBUG Trying to download file cgdsr_1.1.30.tar.gz from http://cran.r-project.org/src/contrib/Archive/cgdsr/cgdsr_1.1.30.tar.gz to /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/cgdsr_1.1.30.tar.gz ... | |
| == 2014-08-05 10:43:01,203 main.filetools DEBUG Downloading cgdsr_1.1.30.tar.gz from http://cran.r-project.org/src/contrib/Archive/cgdsr/cgdsr_1.1.30.tar.gz to /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/cgdsr_1.1.30.tar.gz | |
| == 2014-08-05 10:43:01,204 main.filetools DEBUG Not creating existing path /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions | |
| == 2014-08-05 10:43:01,299 main.filetools WARNING HTML file downloaded but not expecting it, so assuming invalid download. | |
| == 2014-08-05 10:43:01,299 main.filetools DEBUG removing downloaded file cgdsr_1.1.30.tar.gz from /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/cgdsr_1.1.30.tar.gz | |
| == 2014-08-05 10:43:01,302 main.filetools WARNING Downloading failed at attempt 1, retrying... | |
| == 2014-08-05 10:43:01,379 main.filetools WARNING HTML file downloaded but not expecting it, so assuming invalid download. | |
| == 2014-08-05 10:43:01,379 main.filetools DEBUG removing downloaded file cgdsr_1.1.30.tar.gz from /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/cgdsr_1.1.30.tar.gz | |
| == 2014-08-05 10:43:01,381 main.filetools WARNING Downloading failed at attempt 2, retrying... | |
| == 2014-08-05 10:43:01,463 main.filetools WARNING HTML file downloaded but not expecting it, so assuming invalid download. | |
| == 2014-08-05 10:43:01,463 main.filetools DEBUG removing downloaded file cgdsr_1.1.30.tar.gz from /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/cgdsr_1.1.30.tar.gz | |
| == 2014-08-05 10:43:01,465 main.filetools WARNING Downloading failed at attempt 3, retrying... | |
| == 2014-08-05 10:43:01,465 main.EB_R DEBUG Trying to download file cgdsr_1.1.30.tar.gz from http://cran.freestatistics.org/src/contrib/cgdsr_1.1.30.tar.gz to /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/cgdsr_1.1.30.tar.gz ... | |
| == 2014-08-05 10:43:01,465 main.filetools DEBUG Downloading cgdsr_1.1.30.tar.gz from http://cran.freestatistics.org/src/contrib/cgdsr_1.1.30.tar.gz to /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/cgdsr_1.1.30.tar.gz | |
| == 2014-08-05 10:43:01,466 main.filetools DEBUG Not creating existing path /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions | |
| == 2014-08-05 10:43:01,527 main.filetools INFO Downloading file cgdsr_1.1.30.tar.gz from url http://cran.freestatistics.org/src/contrib/cgdsr_1.1.30.tar.gz: done | |
| == 2014-08-05 10:43:01,527 main.EB_R INFO Successfully downloaded source file cgdsr_1.1.30.tar.gz from http://cran.freestatistics.org/src/contrib/cgdsr_1.1.30.tar.gz | |
| == 2014-08-05 10:43:01,527 main.EB_R INFO Fetched extension patches: [] | |
| == 2014-08-05 10:43:01,528 main.EB_R DEBUG No patches found for extension cgdsr. | |
| == 2014-08-05 10:43:01,528 main.run DEBUG run_cmd: running cmd which eb (in /tmp/vsc40023/easybuild_build/R/3.1.1/intel-2014b/R-3.1.1) | |
| == 2014-08-05 10:43:01,534 main.run DEBUG cmd "which eb" exited with exitcode 0 and output: | |
| /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2014-08-05 10:43:01,535 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2014-08-05 10:43:01,535 main.easyconfig.tools DEBUG Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2014-08-05 10:43:01,535 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,535 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,535 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,536 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,536 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,536 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,536 main.easyconfig.tools DEBUG Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,536 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,537 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,537 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,537 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,537 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,537 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,538 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,538 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,538 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,538 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,538 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,539 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,539 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,539 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,539 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,539 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,540 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,540 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,540 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,540 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,540 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,540 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,541 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,541 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,541 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,541 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,541 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,543 main.EB_R INFO Found file R.utils_1.32.4.tar.gz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/R.utils_1.32.4.tar.gz | |
| == 2014-08-05 10:43:01,544 main.EB_R INFO Fetched extension patches: [] | |
| == 2014-08-05 10:43:01,544 main.EB_R DEBUG No patches found for extension R.utils. | |
| == 2014-08-05 10:43:01,544 main.run DEBUG run_cmd: running cmd which eb (in /tmp/vsc40023/easybuild_build/R/3.1.1/intel-2014b/R-3.1.1) | |
| == 2014-08-05 10:43:01,550 main.run DEBUG cmd "which eb" exited with exitcode 0 and output: | |
| /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2014-08-05 10:43:01,551 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2014-08-05 10:43:01,551 main.easyconfig.tools DEBUG Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2014-08-05 10:43:01,551 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,551 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,552 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,552 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,552 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,552 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,552 main.easyconfig.tools DEBUG Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,553 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,553 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,553 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,553 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,553 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,554 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,554 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,554 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,554 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,554 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,555 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,555 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,555 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,555 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,555 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,555 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,556 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,556 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,556 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,556 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,556 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,557 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,557 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,557 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,557 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,557 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,558 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,559 main.EB_R INFO Found file R.matlab_3.0.1.tar.gz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/R.matlab_3.0.1.tar.gz | |
| == 2014-08-05 10:43:01,560 main.EB_R INFO Fetched extension patches: [] | |
| == 2014-08-05 10:43:01,560 main.EB_R DEBUG No patches found for extension R.matlab. | |
| == 2014-08-05 10:43:01,560 main.run DEBUG run_cmd: running cmd which eb (in /tmp/vsc40023/easybuild_build/R/3.1.1/intel-2014b/R-3.1.1) | |
| == 2014-08-05 10:43:01,567 main.run DEBUG cmd "which eb" exited with exitcode 0 and output: | |
| /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2014-08-05 10:43:01,567 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2014-08-05 10:43:01,567 main.easyconfig.tools DEBUG Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2014-08-05 10:43:01,567 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,568 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,568 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,568 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,568 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,568 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,569 main.easyconfig.tools DEBUG Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,569 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,569 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,569 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,569 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,570 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,570 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,570 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,570 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,570 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,571 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,571 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,571 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,571 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,571 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,572 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,572 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,572 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,572 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,572 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,572 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,573 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,573 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,573 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,573 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,573 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,574 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,574 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,576 main.EB_R INFO Found file Rniftilib_0.0-32.tar.gz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/Rniftilib_0.0-32.tar.gz | |
| == 2014-08-05 10:43:01,576 main.EB_R INFO Fetched extension patches: [] | |
| == 2014-08-05 10:43:01,576 main.EB_R DEBUG No patches found for extension Rniftilib. | |
| == 2014-08-05 10:43:01,577 main.run DEBUG run_cmd: running cmd which eb (in /tmp/vsc40023/easybuild_build/R/3.1.1/intel-2014b/R-3.1.1) | |
| == 2014-08-05 10:43:01,583 main.run DEBUG cmd "which eb" exited with exitcode 0 and output: | |
| /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2014-08-05 10:43:01,584 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2014-08-05 10:43:01,584 main.easyconfig.tools DEBUG Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2014-08-05 10:43:01,584 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,584 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,584 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,585 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,585 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,585 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,585 main.easyconfig.tools DEBUG Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,585 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,586 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,586 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,586 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,586 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,586 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,587 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,587 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,587 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,587 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,587 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,588 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,588 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,588 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,588 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,588 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,588 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,589 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,589 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,589 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,589 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,589 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,590 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,590 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,590 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,590 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,590 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,592 main.EB_R INFO Found file BiocGenerics_0.10.0.tar.gz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/BiocGenerics_0.10.0.tar.gz | |
| == 2014-08-05 10:43:01,593 main.EB_R INFO Fetched extension patches: [] | |
| == 2014-08-05 10:43:01,593 main.EB_R DEBUG No patches found for extension BiocGenerics. | |
| == 2014-08-05 10:43:01,593 main.run DEBUG run_cmd: running cmd which eb (in /tmp/vsc40023/easybuild_build/R/3.1.1/intel-2014b/R-3.1.1) | |
| == 2014-08-05 10:43:01,599 main.run DEBUG cmd "which eb" exited with exitcode 0 and output: | |
| /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2014-08-05 10:43:01,600 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2014-08-05 10:43:01,600 main.easyconfig.tools DEBUG Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2014-08-05 10:43:01,600 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,600 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,601 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,601 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,601 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,601 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,601 main.easyconfig.tools DEBUG Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,602 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,602 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,602 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,602 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,602 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,603 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,603 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,603 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,603 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,603 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,604 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,604 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,604 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,604 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,604 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,604 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,605 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,605 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,605 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,605 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,605 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,606 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,606 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,606 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,606 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,606 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,607 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,608 main.EB_R INFO Found file Biobase_2.24.0.tar.gz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/Biobase_2.24.0.tar.gz | |
| == 2014-08-05 10:43:01,609 main.EB_R INFO Fetched extension patches: [] | |
| == 2014-08-05 10:43:01,609 main.EB_R DEBUG No patches found for extension Biobase. | |
| == 2014-08-05 10:43:01,609 main.run DEBUG run_cmd: running cmd which eb (in /tmp/vsc40023/easybuild_build/R/3.1.1/intel-2014b/R-3.1.1) | |
| == 2014-08-05 10:43:01,616 main.run DEBUG cmd "which eb" exited with exitcode 0 and output: | |
| /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2014-08-05 10:43:01,616 main.run DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2014-08-05 10:43:01,616 main.easyconfig.tools DEBUG Also considering installation prefix /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2014-08-05 10:43:01,616 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,617 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,617 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,617 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyblocks-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,617 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.15.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,617 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,618 main.easyconfig.tools DEBUG Added /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,618 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/keyring-3.7-py2.6.egg/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,618 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,618 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,618 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,619 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,619 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,619 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,619 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/myeasyblocks/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,619 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python26.zip/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,620 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,620 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/plat-linux2/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,620 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-tk/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,620 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-old/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,620 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/lib-dynload/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,620 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,621 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/pbs/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,621 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,621 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/setuptools-0.6c11-py2.6.egg-info/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,621 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,621 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,622 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/python2.6/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,622 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/async/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,622 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/python2.6/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,622 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path ../easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,622 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,622 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /usr/lib64/graphviz/python/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,623 main.easyconfig.tools DEBUG Looking for easybuild/easyconfigs in path /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2014-08-05 10:43:01,629 main.filetools DEBUG Not creating existing path /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R | |
| == 2014-08-05 10:43:01,630 main.EB_R DEBUG Trying to download file IRanges_1.22.9.tar.gz from http://www.bioconductor.org/packages/2.14/bioc/src/contrib/IRanges_1.22.9.tar.gz to /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz ... | |
| == 2014-08-05 10:43:01,630 main.filetools DEBUG Downloading IRanges_1.22.9.tar.gz from http://www.bioconductor.org/packages/2.14/bioc/src/contrib/IRanges_1.22.9.tar.gz to /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz | |
| == 2014-08-05 10:43:01,630 main.filetools DEBUG Not creating existing path /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions | |
| == 2014-08-05 10:43:02,173 main.filetools WARNING HTML file downloaded but not expecting it, so assuming invalid download. | |
| == 2014-08-05 10:43:02,173 main.filetools DEBUG removing downloaded file IRanges_1.22.9.tar.gz from /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz | |
| == 2014-08-05 10:43:02,176 main.filetools WARNING Downloading failed at attempt 1, retrying... | |
| == 2014-08-05 10:43:02,213 main.filetools WARNING HTML file downloaded but not expecting it, so assuming invalid download. | |
| == 2014-08-05 10:43:02,213 main.filetools DEBUG removing downloaded file IRanges_1.22.9.tar.gz from /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz | |
| == 2014-08-05 10:43:02,215 main.filetools WARNING Downloading failed at attempt 2, retrying... | |
| == 2014-08-05 10:43:02,249 main.filetools WARNING HTML file downloaded but not expecting it, so assuming invalid download. | |
| == 2014-08-05 10:43:02,250 main.filetools DEBUG removing downloaded file IRanges_1.22.9.tar.gz from /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz | |
| == 2014-08-05 10:43:02,252 main.filetools WARNING Downloading failed at attempt 3, retrying... | |
| == 2014-08-05 10:43:02,252 main.EB_R DEBUG Trying to download file IRanges_1.22.9.tar.gz from http://cran.us.r-project.org/src/base/R-3/IRanges_1.22.9.tar.gz to /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz ... | |
| == 2014-08-05 10:43:02,252 main.filetools DEBUG Downloading IRanges_1.22.9.tar.gz from http://cran.us.r-project.org/src/base/R-3/IRanges_1.22.9.tar.gz to /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz | |
| == 2014-08-05 10:43:02,253 main.filetools DEBUG Not creating existing path /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions | |
| == 2014-08-05 10:43:02,757 main.filetools WARNING HTML file downloaded but not expecting it, so assuming invalid download. | |
| == 2014-08-05 10:43:02,757 main.filetools DEBUG removing downloaded file IRanges_1.22.9.tar.gz from /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz | |
| == 2014-08-05 10:43:02,759 main.filetools WARNING Downloading failed at attempt 1, retrying... | |
| == 2014-08-05 10:43:03,083 main.filetools WARNING HTML file downloaded but not expecting it, so assuming invalid download. | |
| == 2014-08-05 10:43:03,084 main.filetools DEBUG removing downloaded file IRanges_1.22.9.tar.gz from /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz | |
| == 2014-08-05 10:43:03,086 main.filetools WARNING Downloading failed at attempt 2, retrying... | |
| == 2014-08-05 10:43:03,411 main.filetools WARNING HTML file downloaded but not expecting it, so assuming invalid download. | |
| == 2014-08-05 10:43:03,412 main.filetools DEBUG removing downloaded file IRanges_1.22.9.tar.gz from /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz | |
| == 2014-08-05 10:43:03,413 main.filetools WARNING Downloading failed at attempt 3, retrying... | |
| == 2014-08-05 10:43:03,414 main.EB_R ERROR EasyBuild crashed with an error (at easybuild/framework/easyblock.py:562 in obtain_file): Couldn't find file IRanges_1.22.9.tar.gz anywhere, and downloading it didn't work either... | |
| Paths attempted (in order): /tmp/easybuild-mfkmm8/files_pr956/r/R/extensions/IRanges_1.22.9.tar.gz, /tmp/easybuild-mfkmm8/files_pr956/r/R/packages/IRanges_1.22.9.tar.gz, /tmp/easybuild-mfkmm8/files_pr956/r/R/IRanges_1.22.9.tar.gz, /tmp/easybuild-mfkmm8/files_pr956/R/extensions/IRanges_1.22.9.tar.gz, /tmp/easybuild-mfkmm8/files_pr956/R/packages/IRanges_1.22.9.tar.gz, /tmp/easybuild-mfkmm8/files_pr956/R/IRanges_1.22.9.tar.gz, /tmp/easybuild-mfkmm8/files_pr956/extensions/IRanges_1.22.9.tar.gz, /tmp/easybuild-mfkmm8/files_pr956/packages/IRanges_1.22.9.tar.gz, /tmp/easybuild-mfkmm8/files_pr956/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/r/R/extensions/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/r/R/packages/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/r/R/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/R/extensions/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/R/packages/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/R/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/extensions/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/packages/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/r/R/extensions/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/r/R/packages/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/r/R/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/R/extensions/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/R/packages/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/R/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/extensions/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/packages/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/r/R/extensions/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/r/R/packages/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/r/R/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/R/extensions/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/R/packages/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/R/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/extensions/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/packages/IRanges_1.22.9.tar.gz, /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.15.0.0dev-py2.6.egg/easybuild/easyconfigs/IRanges_1.22.9.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/extensions/IRanges_1.22.9.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/packages/IRanges_1.22.9.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/IRanges_1.22.9.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/R/extensions/IRanges_1.22.9.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/R/packages/IRanges_1.22.9.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/R/IRanges_1.22.9.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/extensions/IRanges_1.22.9.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/packages/IRanges_1.22.9.tar.gz, /user/data/gent/vsc400/vsc40023/EasyBuild/sources/IRanges_1.22.9.tar.gz, /apps/gent/source/r/R/extensions/IRanges_1.22.9.tar.gz, /apps/gent/source/r/R/packages/IRanges_1.22.9.tar.gz, /apps/gent/source/r/R/IRanges_1.22.9.tar.gz, /apps/gent/source/R/extensions/IRanges_1.22.9.tar.gz, /apps/gent/source/R/packages/IRanges_1.22.9.tar.gz, /apps/gent/source/R/IRanges_1.22.9.tar.gz, /apps/gent/source/extensions/IRanges_1.22.9.tar.gz, /apps/gent/source/packages/IRanges_1.22.9.tar.gz, /apps/gent/source/IRanges_1.22.9.tar.gz, /nfsmuk/apps/gent/source/r/R/extensions/IRanges_1.22.9.tar.gz, /nfsmuk/apps/gent/source/r/R/packages/IRanges_1.22.9.tar.gz, /nfsmuk/apps/gent/source/r/R/IRanges_1.22.9.tar.gz, /nfsmuk/apps/gent/source/R/extensions/IRanges_1.22.9.tar.gz, /nfsmuk/apps/gent/source/R/packages/IRanges_1.22.9.tar.gz, /nfsmuk/apps/gent/source/R/IRanges_1.22.9.tar.gz, /nfsmuk/apps/gent/source/extensions/IRanges_1.22.9.tar.gz, /nfsmuk/apps/gent/source/packages/IRanges_1.22.9.tar.gz, /nfsmuk/apps/gent/source/IRanges_1.22.9.tar.gz, http://www.bioconductor.org/packages/2.14/bioc/src/contrib/IRanges_1.22.9.tar.gz, http://cran.us.r-project.org/src/base/R-3/IRanges_1.22.9.tar.gz | |
| == 2014-08-05 10:43:03,414 main.easyblock.<module> WARNING build failed (first 300 chars): EasyBuild crashed with an error (at easybuild/framework/easyblock.py:562 in obtain_file): Couldn't find file IRanges_1.22.9.tar.gz anywhere, and downloading it didn't work either... | |
| Paths attempted (in order): /tmp/easybuild-mfkmm8/files_pr956/r/R/extensions/IRanges_1.22.9.tar.gz, /tmp/easybuild-mfk | |
| == 2014-08-05 10:43:03,415 main.EB_R INFO Closing log for application name R version 3.1.1 |
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