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cmzmasek/gist:1170405

Created August 25, 2011 10:33
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gistfile1.xml
<?xml version="1.0"?>
<rdf:RDF
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:hmmer_hit="http://www.open-bio.org/core/hmmer_hit/"
>
<rdf:Description rdf:about="http://pfam.sanger.ac.uk/family?acc=PF00400.26">
<hmmer_hit:target_name>WD40</hmmer_hit:target_name>
<hmmer_hit:query_name>sp|O14727|APAF_HUMAN</hmmer_hit:query_name>
<hmmer_hit:full_sequence_e_value>2.0e-82</hmmer_hit:full_sequence_e_value>
<hmmer_hit:full_sequence_score>268.1</hmmer_hit:full_sequence_score>
<hmmer_hit:full_sequence_bias>47.4</hmmer_hit:full_sequence_bias>
<hmmer_hit:best_1_domain_e_value>1.1e-12</hmmer_hit:best_1_domain_e_value>
<hmmer_hit:best_1_domain_score>47.0</hmmer_hit:best_1_domain_score>
<hmmer_hit:best_1_domain_bias>0.1</hmmer_hit:best_1_domain_bias>
<hmmer_hit:domain_number_est_exp>13</hmmer_hit:domain_number_est_exp>
<hmmer_hit:domain_number_est_reg>13</hmmer_hit:domain_number_est_reg>
<hmmer_hit:domain_number_est_clu>0</hmmer_hit:domain_number_est_clu>
<hmmer_hit:domain_number_est_ov>0</hmmer_hit:domain_number_est_ov>
<hmmer_hit:domain_number_est_env>13</hmmer_hit:domain_number_est_env>
<hmmer_hit:domain_number_est_dom>13</hmmer_hit:domain_number_est_dom>
<hmmer_hit:domain_number_est_rep>13</hmmer_hit:domain_number_est_rep>
<hmmer_hit:domain_number_est_inc>13</hmmer_hit:domain_number_est_inc>
<hmmer_hit:target_description>WD domain, G-beta repeat</hmmer_hit:target_description>
</rdf:Description>
<rdf:Description rdf:about="http://pfam.sanger.ac.uk/family?acc=PF00931.16">
<hmmer_hit:target_name>NB-ARC</hmmer_hit:target_name>
<hmmer_hit:query_name>sp|O14727|APAF_HUMAN</hmmer_hit:query_name>
<hmmer_hit:full_sequence_e_value>5.5e-75</hmmer_hit:full_sequence_e_value>
<hmmer_hit:full_sequence_score>251.5</hmmer_hit:full_sequence_score>
<hmmer_hit:full_sequence_bias>0.7</hmmer_hit:full_sequence_bias>
<hmmer_hit:best_1_domain_e_value>9.1e-75</hmmer_hit:best_1_domain_e_value>
<hmmer_hit:best_1_domain_score>250.8</hmmer_hit:best_1_domain_score>
<hmmer_hit:best_1_domain_bias>0.5</hmmer_hit:best_1_domain_bias>
<hmmer_hit:domain_number_est_exp>1</hmmer_hit:domain_number_est_exp>
<hmmer_hit:domain_number_est_reg>1</hmmer_hit:domain_number_est_reg>
<hmmer_hit:domain_number_est_clu>0</hmmer_hit:domain_number_est_clu>
<hmmer_hit:domain_number_est_ov>0</hmmer_hit:domain_number_est_ov>
<hmmer_hit:domain_number_est_env>1</hmmer_hit:domain_number_est_env>
<hmmer_hit:domain_number_est_dom>1</hmmer_hit:domain_number_est_dom>
<hmmer_hit:domain_number_est_rep>1</hmmer_hit:domain_number_est_rep>
<hmmer_hit:domain_number_est_inc>1</hmmer_hit:domain_number_est_inc>
<hmmer_hit:target_description>NB-ARC domain</hmmer_hit:target_description>
</rdf:Description>
<rdf:Description rdf:about="http://pfam.sanger.ac.uk/family?acc=PF00619.15">
<hmmer_hit:target_name>CARD</hmmer_hit:target_name>
<hmmer_hit:query_name>sp|O14727|APAF_HUMAN</hmmer_hit:query_name>
<hmmer_hit:full_sequence_e_value>8.8e-19</hmmer_hit:full_sequence_e_value>
<hmmer_hit:full_sequence_score>66.8</hmmer_hit:full_sequence_score>
<hmmer_hit:full_sequence_bias>0.2</hmmer_hit:full_sequence_bias>
<hmmer_hit:best_1_domain_e_value>2.6e-18</hmmer_hit:best_1_domain_e_value>
<hmmer_hit:best_1_domain_score>65.3</hmmer_hit:best_1_domain_score>
<hmmer_hit:best_1_domain_bias>0.1</hmmer_hit:best_1_domain_bias>
<hmmer_hit:domain_number_est_exp>1</hmmer_hit:domain_number_est_exp>
<hmmer_hit:domain_number_est_reg>1</hmmer_hit:domain_number_est_reg>
<hmmer_hit:domain_number_est_clu>0</hmmer_hit:domain_number_est_clu>
<hmmer_hit:domain_number_est_ov>0</hmmer_hit:domain_number_est_ov>
<hmmer_hit:domain_number_est_env>1</hmmer_hit:domain_number_est_env>
<hmmer_hit:domain_number_est_dom>1</hmmer_hit:domain_number_est_dom>
<hmmer_hit:domain_number_est_rep>1</hmmer_hit:domain_number_est_rep>
<hmmer_hit:domain_number_est_inc>1</hmmer_hit:domain_number_est_inc>
<hmmer_hit:target_description>Caspase recruitment domain</hmmer_hit:target_description>
</rdf:Description>
<rdf:Description rdf:about="http://pfam.sanger.ac.uk/family?acc=PF05729.6">
<hmmer_hit:target_name>NACHT</hmmer_hit:target_name>
<hmmer_hit:query_name>sp|O14727|APAF_HUMAN</hmmer_hit:query_name>
<hmmer_hit:full_sequence_e_value>0.011</hmmer_hit:full_sequence_e_value>
<hmmer_hit:full_sequence_score>15.0</hmmer_hit:full_sequence_score>
<hmmer_hit:full_sequence_bias>0.1</hmmer_hit:full_sequence_bias>
<hmmer_hit:best_1_domain_e_value>0.041</hmmer_hit:best_1_domain_e_value>
<hmmer_hit:best_1_domain_score>13.2</hmmer_hit:best_1_domain_score>
<hmmer_hit:best_1_domain_bias>0.1</hmmer_hit:best_1_domain_bias>
<hmmer_hit:domain_number_est_exp>2</hmmer_hit:domain_number_est_exp>
<hmmer_hit:domain_number_est_reg>1</hmmer_hit:domain_number_est_reg>
<hmmer_hit:domain_number_est_clu>0</hmmer_hit:domain_number_est_clu>
<hmmer_hit:domain_number_est_ov>0</hmmer_hit:domain_number_est_ov>
<hmmer_hit:domain_number_est_env>1</hmmer_hit:domain_number_est_env>
<hmmer_hit:domain_number_est_dom>1</hmmer_hit:domain_number_est_dom>
<hmmer_hit:domain_number_est_rep>1</hmmer_hit:domain_number_est_rep>
<hmmer_hit:domain_number_est_inc>0</hmmer_hit:domain_number_est_inc>
<hmmer_hit:target_description>NACHT domain</hmmer_hit:target_description>
</rdf:Description>
</rdf:RDF>
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