Created
October 27, 2011 06:49
-
-
Save oyvholm/1318935 to your computer and use it in GitHub Desktop.
Copy of email
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Something really weird is happening to a repository I'm working on, and | |
| it's only a problem in recent Gits. A bisect shows that from | |
| v1.7.6-1-g2548183 ("fix phantom untracked files when core.ignorecase is | |
| set") and newer, this happens: | |
| $ git clone git://gitorious.org/tz/tzfiles.git | |
| Cloning into tzfiles... | |
| remote: Counting objects: 358, done. | |
| remote: Compressing objects: 100% (352/352), done. | |
| remote: Total 358 (delta 8), reused 343 (delta 3) | |
| Receiving objects: 100% (358/358), 44.15 MiB | 3.76 MiB/s, done. | |
| Resolving deltas: 100% (8/8), done. | |
| $ cd tzfiles/ | |
| $ git status | |
| git: malloc.c:3096: sYSMALLOc: Assertion `(old_top == (((mbinptr) (((char *) &((av)->bins[((1) - 1) * 2])) - __builtin_offsetof (struct malloc_chunk, fd)))) && old_size == 0) || ((unsigned long) (old_size) >= (unsigned long)((((__builtin_offsetof (struct malloc_chunk, fd_nextsize))+((2 * (sizeof(size_t))) - 1)) & ~((2 * (sizeof(size_t))) - 1))) && ((old_top)->size & 0x1) && ((unsigned long)old_end & pagemask) == 0)' failed. | |
| Aborted | |
| $ git status | |
| *** glibc detected *** git: free(): invalid next size (normal): 0x089f5588 *** | |
| ======= Backtrace: ========= | |
| /lib/tls/i686/cmov/libc.so.6(+0x6b591)[0xb74d3591] | |
| /lib/tls/i686/cmov/libc.so.6(+0x6cde8)[0xb74d4de8] | |
| /lib/tls/i686/cmov/libc.so.6(cfree+0x6d)[0xb74d7ecd] | |
| /lib/tls/i686/cmov/libc.so.6(+0x5c410)[0xb74c4410] | |
| /lib/tls/i686/cmov/libc.so.6(fopen64+0x2c)[0xb74c69ec] | |
| git[0x80c1fdd] | |
| git[0x811b82b] | |
| git[0x80637ea] | |
| git[0x804bc87] | |
| git[0x804be93] | |
| /lib/tls/i686/cmov/libc.so.6(__libc_start_main+0xe6)[0xb747ebd6] | |
| git[0x804b521] | |
| ======= Memory map: ======== | |
| 08048000-08160000 r-xp 00000000 ca:00 2474445 /usr/local/varprg/git.master.v1.7.7-419-g87009ed/bin/git | |
| 08160000-08161000 r--p 00117000 ca:00 2474445 /usr/local/varprg/git.master.v1.7.7-419-g87009ed/bin/git | |
| 08161000-08166000 rw-p 00118000 ca:00 2474445 /usr/local/varprg/git.master.v1.7.7-419-g87009ed/bin/git | |
| 08166000-081b0000 rw-p 00000000 00:00 0 | |
| 089ec000-08a0d000 rw-p 00000000 00:00 0 [heap] | |
| b7300000-b7321000 rw-p 00000000 00:00 0 | |
| b7321000-b7400000 ---p 00000000 00:00 0 | |
| b7444000-b7461000 r-xp 00000000 ca:00 24591 /lib/libgcc_s.so.1 | |
| b7461000-b7462000 r--p 0001c000 ca:00 24591 /lib/libgcc_s.so.1 | |
| b7462000-b7463000 rw-p 0001d000 ca:00 24591 /lib/libgcc_s.so.1 | |
| b7463000-b7464000 rw-p 00000000 00:00 0 | |
| b7464000-b7466000 r-xp 00000000 ca:00 1679643 /lib/tls/i686/cmov/libdl-2.11.1.so | |
| b7466000-b7467000 r--p 00001000 ca:00 1679643 /lib/tls/i686/cmov/libdl-2.11.1.so | |
| b7467000-b7468000 rw-p 00002000 ca:00 1679643 /lib/tls/i686/cmov/libdl-2.11.1.so | |
| b7468000-b75bb000 r-xp 00000000 ca:00 25961 /lib/tls/i686/cmov/libc-2.11.1.so | |
| b75bb000-b75bc000 ---p 00153000 ca:00 25961 /lib/tls/i686/cmov/libc-2.11.1.so | |
| b75bc000-b75be000 r--p 00153000 ca:00 25961 /lib/tls/i686/cmov/libc-2.11.1.so | |
| b75be000-b75bf000 rw-p 00155000 ca:00 25961 /lib/tls/i686/cmov/libc-2.11.1.so | |
| b75bf000-b75c3000 rw-p 00000000 00:00 0 | |
| b75c3000-b75d8000 r-xp 00000000 ca:00 1679654 /lib/tls/i686/cmov/libpthread-2.11.1.so | |
| b75d8000-b75d9000 r--p 00014000 ca:00 1679654 /lib/tls/i686/cmov/libpthread-2.11.1.so | |
| b75d9000-b75da000 rw-p 00015000 ca:00 1679654 /lib/tls/i686/cmov/libpthread-2.11.1.so | |
| b75da000-b75dc000 rw-p 00000000 00:00 0 | |
| b75dc000-b7714000 r-xp 00000000 ca:00 2007508 /lib/i686/cmov/libcrypto.so.0.9.8 | |
| b7714000-b771c000 r--p 00137000 ca:00 2007508 /lib/i686/cmov/libcrypto.so.0.9.8 | |
| b771c000-b772a000 rw-p 0013f000 ca:00 2007508 /lib/i686/cmov/libcrypto.so.0.9.8 | |
| b772a000-b772e000 rw-p 00000000 00:00 0 | |
| b772e000-b7741000 r-xp 00000000 ca:00 24635 /lib/libz.so.1.2.3.3 | |
| b7741000-b7742000 r--p 00012000 ca:00 24635 /lib/libz.so.1.2.3.3 | |
| b7742000-b7743000 rw-p 00013000 ca:00 24635 /lib/libz.so.1.2.3.3 | |
| b774b000-b774f000 rw-p 00000000 00:00 0 | |
| b774f000-b776a000 r-xp 00000000 ca:00 25083 /lib/ld-2.11.1.so | |
| b776a000-b776b000 r--p 0001a000 ca:00 25083 /lib/ld-2.11.1.so | |
| b776b000-b776c000 rw-p 0001b000 ca:00 25083 /lib/ld-2.11.1.so | |
| bfc1b000-bfc3c000 rw-p 00000000 00:00 0 [stack] | |
| f57fe000-f57ff000 r-xp 00000000 00:00 0 [vdso] | |
| Aborted | |
| $ | |
| Reverting 2548183 fixes the problem. | |
| It also seems that the behaviour is not consistent. Sometimes, after | |
| running the second "git status", this happens: | |
| $ git st | |
| error: index uses extension, which we do not understand | |
| fatal: index file corrupt | |
| And no, this is not memory corruption or something like that, the same | |
| thing happens on my laptop. | |
| Another curious thing: When using an earlier git (for example v1.7.6 in | |
| the example below) on this repo after a "git status" with a recent git, | |
| it segfaults. This indicates that recents Gits messes up something so | |
| even old gits won't work in that repo anymore. This is the last lines of | |
| an strace: | |
| open(".git/objects/pack", O_RDONLY|O_NONBLOCK|O_LARGEFILE|O_DIRECTORY|O_CLOEXEC) = 3 | |
| getdents64(3, /* 4 entries */, 32768) = 192 | |
| access(".git/objects/pack/pack-b9b05d1e8fed49138c1ffda8f0f2b7d7a8d31c6a.keep", F_OK) = -1 ENOENT (No such file or directory) | |
| stat64(".git/objects/pack/pack-b9b05d1e8fed49138c1ffda8f0f2b7d7a8d31c6a.pack", {st_mode=S_IFREG|0444, st_size=46297839, ...}) = 0 | |
| getdents64(3, /* 0 entries */, 32768) = 0 | |
| close(3) = 0 | |
| open(".git/objects/info/alternates", O_RDONLY|O_LARGEFILE|O_NOATIME) = -1 ENOENT (No such file or directory) | |
| open(".git/objects/pack/pack-b9b05d1e8fed49138c1ffda8f0f2b7d7a8d31c6a.idx", O_RDONLY|O_LARGEFILE|O_NOATIME) = 3 | |
| fstat64(3, {st_mode=S_IFREG|0444, st_size=11096, ...}) = 0 | |
| mmap2(NULL, 11096, PROT_READ, MAP_PRIVATE, 3, 0) = 0xb76e1000 | |
| close(3) = 0 | |
| getrlimit(RLIMIT_NOFILE, {rlim_cur=1024, rlim_max=1024}) = 0 | |
| open(".git/objects/pack/pack-b9b05d1e8fed49138c1ffda8f0f2b7d7a8d31c6a.pack", O_RDONLY|O_LARGEFILE|O_NOATIME) = 3 | |
| fstat64(3, {st_mode=S_IFREG|0444, st_size=46297839, ...}) = 0 | |
| fcntl64(3, F_GETFD) = 0 | |
| fcntl64(3, F_SETFD, FD_CLOEXEC) = 0 | |
| read(3, "PACK\0\0\0\2\0\0\1f", 12) = 12 | |
| _llseek(3, 46297819, [46297819], SEEK_SET) = 0 | |
| read(3, ",j\212\0375c\335\0k\244)\256\376\24\v\344\6]0\230", 20) = 20 | |
| mmap2(NULL, 33554432, PROT_READ, MAP_PRIVATE, 3, 0) = 0xb53fc000 | |
| open(".git/info/grafts", O_RDONLY|O_LARGEFILE) = -1 ENOENT (No such file or directory) | |
| open(".git/shallow", O_RDONLY|O_LARGEFILE) = -1 ENOENT (No such file or directory) | |
| brk(0x977e000) = 0x977e000 | |
| open("/proc/meminfo", O_RDONLY) = 4 | |
| fstat64(4, {st_mode=S_IFREG|0444, st_size=0, ...}) = 0 | |
| mmap2(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0xb76e0000 | |
| read(4, "MemTotal: 1028684 kB\nMemF"..., 1024) = 1024 | |
| close(4) = 0 | |
| munmap(0xb76e0000, 4096) = 0 | |
| access(".git/info/exclude", R_OK) = 0 | |
| open(".git/info/exclude", O_RDONLY|O_LARGEFILE) = 4 | |
| fstat64(4, {st_mode=S_IFREG|0644, st_size=240, ...}) = 0 | |
| read(4, "# git ls-files --others --exclud"..., 240) = 240 | |
| close(4) = 0 | |
| access("/home/sunny/src/git/home-sunny/.gitexclude", R_OK) = 0 | |
| open("/home/sunny/src/git/home-sunny/.gitexclude", O_RDONLY|O_LARGEFILE) = 4 | |
| fstat64(4, {st_mode=S_IFREG|0644, st_size=86, ...}) = 0 | |
| read(4, "\n# ~/.gitexclude\n# File ID: bcf6"..., 86) = 86 | |
| close(4) = 0 | |
| open(".", O_RDONLY|O_NONBLOCK|O_LARGEFILE|O_DIRECTORY|O_CLOEXEC) = 4 | |
| getdents64(4, /* 7 entries */, 32768) = 216 | |
| open(".gitignore", O_RDONLY|O_LARGEFILE) = -1 ENOENT (No such file or directory) | |
| --- SIGSEGV (Segmentation fault) @ 0 (0) --- | |
| +++ killed by SIGSEGV +++ | |
| Complete strace dump is stored at https://gist.github.com/1318830 . | |
| I'm currently using 1.7.7.419.g87009 , compiled with a regular "make" | |
| from the master branch. A quick test with newest master | |
| (v1.7.7.1-475-g997a194) shows the same error. Not installed properly, | |
| though, as I haven't run the test suite yet. | |
| System info: | |
| Ubuntu 10.04.3 LTS | |
| gcc (Ubuntu 4.4.3-4ubuntu5) 4.4.3 | |
| GNU ld (GNU Binutils for Ubuntu) 2.20.1-system.20100303 | |
| Same thing happens with Ubuntu 10.10 on my laptop. | |
| Even when creating a bundle and recloning, this happens. Also when | |
| initialising a new, clean repo and fetching from the original local | |
| clone, same story. | |
| The repository was created on 2011-10-08 06:54:00 +0200, and because I | |
| create a tag everytime I compile (using | |
| <https://github.com/sunny256/utils/blob/master/build-git>), I know the | |
| repository was created with git v1.7.7-138-g7f41b6b. | |
| Regards, | |
| Øyvind |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment