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boegel/easybuild_test_report_easyconfigs_pr3954_20163021-UTC-07-30-44.md

Created December 21, 2016 07:30
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EasyBuild test report for easyconfigs PR #3954
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easybuild_test_report_easyconfigs_pr3954_20163021-UTC-07-30-44.md

Test report for easybuilders/easybuild-easyconfigs#3954

Test result

Build succeeded for 1 out of 1 (1 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS FreeSurfer-5.3.0-centos6_x86_64.eb

Time info

  • start: Wed, 21 Dec 2016 07:27:39 +0000 (UTC)
  • end: Wed, 21 Dec 2016 07:30:44 +0000 (UTC)

EasyBuild info

  • easybuild-framework version: 3.0.2.dev0
  • easybuild-easyblocks version: 3.1.0.dev0
  • command line:
eb -dfr -u --from-pr 3954
  • full configuration (includes defaults):
--buildpath='/tmp/vsc40023/easybuild_build'
--cleanup-builddir
--cleanup-tmpdir
--color='auto'
--debug
--default-opt-level='defaultopt'
--disable-add-dummy-to-minimal-toolchains
--disable-allow-modules-tool-mismatch
--disable-avail-cfgfile-constants
--disable-avail-easyconfig-constants
--disable-avail-easyconfig-licenses
--disable-avail-easyconfig-params
--disable-avail-easyconfig-templates
--disable-avail-module-naming-schemes
--disable-avail-modules-tools
--disable-avail-repositories
--disable-check-conflicts
--disable-check-github
--disable-consider-archived-easyconfigs
--disable-debug-lmod
--disable-devel
--disable-dry-run
--disable-dry-run-short
--disable-dump-autopep8
--disable-dump-env-script
--disable-experimental
--disable-extended-dry-run
--disable-fixed-installdir-naming-scheme
--disable-group-writable-installdir
--disable-hidden
--disable-ignore-osdeps
--disable-info
--disable-install-github-token
--disable-install-latest-eb-release
--disable-job
--disable-last-log
--disable-list-toolchains
--disable-logtostdout
--disable-minimal-toolchains
--disable-module-only
--disable-new-pr
--disable-package
--disable-pretend
--disable-quiet
--disable-read-only-installdir
--disable-rebuild
--disable-recursive-module-unload
--disable-regtest
--disable-rpath
--disable-sequential
--disable-set-gid-bit
--disable-show-config
--disable-show-default-configfiles
--disable-show-default-moduleclasses
--disable-show-full-config
--disable-skip
--disable-skip-test-cases
--disable-sticky-bit
--disable-terse
--disable-update-modules-tool-cache
--disable-use-existing-modules
--extended-dry-run-ignore-errors
--force
--from-pr='3954'
--github-user='boegel'
--ignore-dirs='.git,.svn'
--include-easyblocks=''
--include-module-naming-schemes=''
--include-toolchains=''
--installpath='/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge'
--job-backend='PbsPython'
--job-max-walltime='24'
--job-output-dir='/vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023'
--job-polling-interval='30.0'
--logfile-format='easybuild,easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log'
--module-naming-scheme='EasyBuildMNS'
--module-syntax='Lua'
--moduleclasses='base,bio,cae,chem,compiler,data,debugger,devel,geo,ide,lang,lib,math,mpi,numlib,perf,phys,system,toolchain,tools,vis'
--modules-tool='Lmod'
--mpi-tests
--output-format='txt'
--package-naming-scheme='EasyBuildPNS'
--package-release='1'
--package-tool='fpm'
--package-type='rpm'
--packagepath='/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/packages'
--pr-target-account='hpcugent'
--pr-target-branch='develop'
--pr-target-repo='easybuild-easyconfigs'
--prefix='/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge'
--repository='FileRepository'
--repositorypath='/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/ebfiles_repo'
--robot-paths=''
--robot='/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-3.1.0.dev0-py2.6.egg/easybuild/easyconfigs'
--sourcepath='/user/data/gent/vsc400/vsc40023/EasyBuild/sources:/apps/gent/source:/nfsmuk/apps/gent/source/'
--strict='warn'
--subdir-modules='modules'
--subdir-software='software'
--suffix-modules-path='all'
--upload-test-report
--use-ccache='False'
--use-f90cache='False'

System info

  • core count: 16
  • cpu model: Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz
  • cpu speed: 2600.223
  • cpu vendor: Intel
  • gcc version: Using built-in specs.; Target: x86_64-redhat-linux; Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux; Thread model: posix; gcc version 4.4.7 20120313 (Red Hat 4.4.7-17) (GCC) ;
  • glibc version: 2.12
  • hostname: node2015.delcatty.os
  • os name: SL
  • os type: Linux
  • os version: 6.8
  • platform name: x86_64-unknown-linux
  • python version: 2.6.6 (r266:84292, Aug 18 2016, 12:06:14) ; [GCC 4.4.7 20120313 (Red Hat 4.4.7-17)]
  • system gcc path: /usr/bin/gcc
  • system python path: /usr/bin/python
  • total memory: 64465

List of loaded modules

  • cluster/delcatty

Environment

BASH_FUNC_ml() = () {  eval $(ORIG_LD_LIBRARY_PATH=${LD_LIBRARY_PATH:-} ORIG_LD_PRELOAD=${LD_PRELOAD:-} LD_LIBRARY_PATH="" LD_PRELOAD="" $LMOD_DIR/ml_cmd "$@")
}
BASH_FUNC_module() = () {  eval $(ORIG_LD_LIBRARY_PATH=${LD_LIBRARY_PATH:-} ORIG_LD_PRELOAD=${LD_PRELOAD:-} LD_LIBRARY_PATH="" LD_PRELOAD="" $LMOD_CMD bash "$@");
 [ $? = 0 ] && eval $(${LMOD_SETTARG_CMD:-:} -s sh)
}
CCACHE_COMPILERCHECK = echo %compiler%; %compiler% -v; %compiler% -dumpmachine
CCACHE_COMPRESS = true
CCACHE_MAXSIZE = 0
CCACHE_NLEVELS = 4
CVS_RSH = ssh
EASYBUILD_BUILDPATH = /tmp/vsc40023/easybuild_build
EASYBUILD_GITHUB_USER = boegel
EASYBUILD_JOB_BACKEND = PbsPython
EASYBUILD_PREFIX = /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge
EASYBUILD_SOURCEPATH = /user/data/gent/vsc400/vsc40023/EasyBuild/sources:/apps/gent/source:/nfsmuk/apps/gent/source/
F90CACHE_NLEVELS = 4
FANCYLOGGER_IGNORE_MPI4PY = 1
G_BROKEN_FILENAMES = 1
HISTCONTROL = ignoredups
HISTSIZE = 1000
HOME = /user/home/gent/vsc400/vsc40023
HOSTNAME = node2015.delcatty.os
HPCUGENT_FAMILY_CLUSTER = cluster
HPCUGENT_FAMILY_CLUSTER_VERSION = delcatty
LANG = en_US.utf8
LC_ALL = en_US.utf8
LESSOPEN = ||/usr/bin/lesspipe.sh %s
LMOD_CMD = /usr/share/lmod/lmod/libexec/lmod
LMOD_DEFAULT_MODULEPATH = /etc/modulefiles/vsc
LMOD_DIR = /usr/share/lmod/lmod/libexec
LMOD_FAMILY_CLUSTER = cluster
LMOD_FAMILY_CLUSTER_VERSION = delcatty
LMOD_PKG = /usr/share/lmod/lmod
LMOD_SHORT_TIME = 86400
LMOD_SYSTEM_NAME = SL6-sandybridge
LMOD_VERSION = 6.6
LOADEDMODULES = cluster/delcatty
LOGNAME = vsc40023
LS_COLORS = 
MAIL = /var/spool/mail/vsc40023
MANPATH = :
MODULEPATH = /etc/modulefiles/vsc
MODULESHOME = /usr/share/lmod/lmod
NUM_PROCS = 120
PATH = /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/bin:/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin
PBS_DEFAULT = master15.delcatty.gent.vsc
PWD = /user/home/gent/vsc400/vsc40023
PYTHONOPTIMIZE = 1
PYTHONPATH = /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8:/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages:/user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.6/site-packages/keyring-3.8:/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages
SHELL = /bin/bash
SHLVL = 3
SSH_CLIENT = 172.24.13.3 38151 22
SSH_CONNECTION = 172.24.13.3 38151 172.24.12.15 22
SSH_TTY = /dev/pts/0
STY = 48757.pts-0.node2015
TERM = screen
TERMCAP = SC|screen|VT 100/ANSI X3.64 virtual terminal:\
	:DO=\E[%dB:LE=\E[%dD:RI=\E[%dC:UP=\E[%dA:bs:bt=\E[Z:\
	:cd=\E[J:ce=\E[K:cl=\E[H\E[J:cm=\E[%i%d;%dH:ct=\E[3g:\
	:do=^J:nd=\E[C:pt:rc=\E8:rs=\Ec:sc=\E7:st=\EH:up=\EM:\
	:le=^H:bl=^G:cr=^M:it#8:ho=\E[H:nw=\EE:ta=^I:is=\E)0:\
	:li#51:co#211:am:xn:xv:LP:sr=\EM:al=\E[L:AL=\E[%dL:\
	:cs=\E[%i%d;%dr:dl=\E[M:DL=\E[%dM:dc=\E[P:DC=\E[%dP:\
	:im=\E[4h:ei=\E[4l:mi:IC=\E[%d@:ks=\E[?1h\E=:\
	:ke=\E[?1l\E>:vi=\E[?25l:ve=\E[34h\E[?25h:vs=\E[34l:\
	:ti=\E[?1049h:te=\E[?1049l:us=\E[4m:ue=\E[24m:so=\E[3m:\
	:se=\E[23m:mb=\E[5m:md=\E[1m:mr=\E[7m:me=\E[m:ms:\
	:Co#8:pa#64:AF=\E[3%dm:AB=\E[4%dm:op=\E[39;49m:AX:\
	:vb=\Eg:G0:as=\E(0:ae=\E(B:\
	:ac=\140\140aaffggjjkkllmmnnooppqqrrssttuuvvwwxxyyzz{{||}}~~..--++,,hhII00:\
	:po=\E[5i:pf=\E[4i:k0=\E[10~:k1=\EOP:k2=\EOQ:k3=\EOR:\
	:k4=\EOS:k5=\E[15~:k6=\E[17~:k7=\E[18~:k8=\E[19~:\
	:k9=\E[20~:k;=\E[21~:F1=\E[23~:F2=\E[24~:F3=\E[1;2P:\
	:F4=\E[1;2Q:F5=\E[1;2R:F6=\E[1;2S:F7=\E[15;2~:\
	:F8=\E[17;2~:F9=\E[18;2~:FA=\E[19;2~:kb=�:K2=\EOE:\
	:kB=\E[Z:kF=\E[1;2B:kR=\E[1;2A:*4=\E[3;2~:*7=\E[1;2F:\
	:#2=\E[1;2H:#3=\E[2;2~:#4=\E[1;2D:%c=\E[6;2~:%e=\E[5;2~:\
	:%i=\E[1;2C:kh=\E[1~:@1=\E[1~:kH=\E[4~:@7=\E[4~:\
	:kN=\E[6~:kP=\E[5~:kI=\E[2~:kD=\E[3~:ku=\EOA:kd=\EOB:\
	:kr=\EOC:kl=\EOD:km:
USER = vsc40023
VSCPROFILELOADED = 1
VSC_ARCH_LOCAL = sandybridge
VSC_DATA = /user/data/gent/vsc400/vsc40023
VSC_DATA_VO = /user/data/gent/gvo000/gvo00002
VSC_DATA_VO_USER = /user/data/gent/gvo000/gvo00002/vsc40023
VSC_DEFAULT_CLUSTER_MODULE = delcatty
VSC_HOME = /user/home/gent/vsc400/vsc40023
VSC_INSTITUTE = gent
VSC_INSTITUTE_CLUSTER = delcatty
VSC_INSTITUTE_LOCAL = gent
VSC_OS_LOCAL = SL6
VSC_SCRATCH = /user/scratch/gent/vsc400/vsc40023
VSC_SCRATCH_CLUSTER = /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023
VSC_SCRATCH_DELCATTY = /user/scratchdelcatty/gent/vsc400/vsc40023
VSC_SCRATCH_DELCATTY_VO = /user/scratchdelcatty/gent/gvo000/gvo00002
VSC_SCRATCH_DELCATTY_VO_USER = /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023
VSC_SCRATCH_NODE = /local
VSC_SCRATCH_PHANPY = /user/scratchphanpy/gent/vsc400/vsc40023
VSC_SCRATCH_PHANPY_VO = /user/scratchphanpy/gent/gvo000/gvo00002
VSC_SCRATCH_PHANPY_VO_USER = /user/scratchphanpy/gent/gvo000/gvo00002/vsc40023
VSC_SCRATCH_SITE = /user/scratch/gent/vsc400/vsc40023
VSC_SCRATCH_VO = /user/scratch/gent/gvo000/gvo00002
VSC_SCRATCH_VO_USER = /user/scratch/gent/gvo000/gvo00002/vsc40023
VSC_VO = gvo00002
WINDOW = 0
_ = /usr/bin/python2
_LMFILES_ = /etc/modulefiles/vsc/cluster/delcatty.lua
_ModuleTable001_ = 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
_ModuleTable002_ = L3ZzYyIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzL3ZzYyIsWyJ2ZXJzaW9uIl09Mix9
_ModuleTable_Sz_ = 2
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