Created
January 4, 2017 16:14
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(partial) EasyBuild log for failed build of /tmp/eb-B3gTBZ/files_pr3968/s/ScaLAPACK/ScaLAPACK-2.0.2-gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.7.0.eb (PR #3968)
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| == 2017-01-04 17:13:58,616 easyblock.py:261 INFO This is EasyBuild 3.0.2 (framework: 3.0.2, easyblocks: 3.0.2) on host node2519.golett.os. | |
| == 2017-01-04 17:13:58,616 easyblock.py:267 INFO This is easyblock EB_ScaLAPACK from module easybuild.easyblocks.scalapack (/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyblocks/s/scalapack.pyo) | |
| == 2017-01-04 17:13:58,616 easyblock.py:753 INFO Build dir set to /tmp/vsc40023/easybuild_build/ScaLAPACK/2.0.2/gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.7.0 | |
| == 2017-01-04 17:13:58,616 config.py:423 DEBUG software install path as specified by 'installpath' and 'subdir_software': /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software | |
| == 2017-01-04 17:13:58,616 easyconfig.py:1650 DEBUG Determining software installation subdir for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144e290> | |
| == 2017-01-04 17:13:58,617 easyconfig.py:1656 DEBUG Obtained subdir ScaLAPACK/2.0.2-gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.7.0 | |
| == 2017-01-04 17:13:58,617 easyblock.py:792 INFO Software install dir set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.7.0 | |
| == 2017-01-04 17:13:58,617 config.py:423 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules | |
| == 2017-01-04 17:13:58,617 easyblock.py:797 INFO Module install dir set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all | |
| == 2017-01-04 17:13:58,617 easyblock.py:246 INFO Init completed for application name ScaLAPACK version 2.0.2 | |
| == 2017-01-04 17:13:58,617 easyblock.py:2477 INFO Obtained application instance of for ScaLAPACK (easyblock: None) | |
| == 2017-01-04 17:13:58,617 easyblock.py:2490 DEBUG Skip set to False | |
| == 2017-01-04 17:13:58,618 build_log.py:216 INFO building and installing ScaLAPACK/2.0.2-gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.7.0... | |
| == 2017-01-04 17:13:58,618 easyblock.py:2263 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True | |
| == 2017-01-04 17:13:58,618 build_log.py:216 INFO fetching files... | |
| == 2017-01-04 17:13:58,618 easyblock.py:2271 INFO Starting fetch step | |
| == 2017-01-04 17:13:58,618 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144e290> | |
| == 2017-01-04 17:13:58,618 templates.py:175 DEBUG version found in easyconfig is 2.0.2 | |
| == 2017-01-04 17:13:58,618 templates.py:219 DEBUG name: github_account, config: None | |
| == 2017-01-04 17:13:58,618 templates.py:219 DEBUG name: name, config: ScaLAPACK | |
| == 2017-01-04 17:13:58,619 templates.py:219 DEBUG name: version, config: 2.0.2 | |
| == 2017-01-04 17:13:58,619 templates.py:219 DEBUG name: versionsuffix, config: -OpenBLAS-0.2.19-LAPACK-3.7.0 | |
| == 2017-01-04 17:13:58,619 templates.py:219 DEBUG name: versionprefix, config: | |
| == 2017-01-04 17:13:58,619 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144e290> | |
| == 2017-01-04 17:13:58,619 templates.py:175 DEBUG version found in easyconfig is 2.0.2 | |
| == 2017-01-04 17:13:58,619 templates.py:219 DEBUG name: github_account, config: None | |
| == 2017-01-04 17:13:58,619 templates.py:219 DEBUG name: name, config: ScaLAPACK | |
| == 2017-01-04 17:13:58,619 templates.py:219 DEBUG name: version, config: 2.0.2 | |
| == 2017-01-04 17:13:58,619 templates.py:219 DEBUG name: versionsuffix, config: -OpenBLAS-0.2.19-LAPACK-3.7.0 | |
| == 2017-01-04 17:13:58,620 templates.py:219 DEBUG name: versionprefix, config: | |
| == 2017-01-04 17:13:58,620 easyblock.py:2274 INFO Running method fetch_step part of step fetch | |
| == 2017-01-04 17:13:58,620 easyblock.py:1446 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
| == 2017-01-04 17:13:58,620 filetools.py:237 INFO Command eb found at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin/eb | |
| == 2017-01-04 17:13:58,620 tools.py:261 DEBUG Also considering installation prefix /user/data/gent/vsc400/vsc40023/easybuild_easy_installed... | |
| == 2017-01-04 17:13:58,620 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,620 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-B3gTBZ/files_pr3968/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,621 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,621 tools.py:266 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,621 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_base-2.5.5-py2.7.egg/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,621 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/vsc_install-0.10.20-py2.7.egg/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,621 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_framework-3.0.2.dev0-py2.6.egg/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,621 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyblocks-3.0.2-py2.6.egg/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,621 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,621 tools.py:270 DEBUG Added /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.0.2-py2.6.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,622 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/MySQLdb/1.2.5-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/MySQL_python-1.2.5-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,622 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /apps/gent/SL6/sandybridge/software/psutil/3.4.2-intel-2016a-Python-2.7.11/lib/python2.7/site-packages/psutil-3.4.2-py2.7-linux-x86_64.egg/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,622 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.7/site-packages/keyring-3.8/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,622 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,622 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,622 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,623 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,623 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,623 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,623 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,623 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,623 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/home/gent/vsc400/vsc40023/.local/lib/python2.7/site-packages/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,623 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,623 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/pbs/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,624 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,624 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,624 tools.py:266 DEBUG Checking for easybuild/easyconfigs at /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/easybuild/easyconfigs | |
| == 2017-01-04 17:13:58,628 easyblock.py:590 INFO Found file scalapack-2.0.2.tgz at /user/data/gent/vsc400/vsc40023/EasyBuild/sources/s/ScaLAPACK/scalapack-2.0.2.tgz | |
| == 2017-01-04 17:13:58,628 easyblock.py:338 DEBUG File /user/data/gent/vsc400/vsc40023/EasyBuild/sources/s/ScaLAPACK/scalapack-2.0.2.tgz found for source scalapack-2.0.2.tgz | |
| == 2017-01-04 17:13:58,628 easyblock.py:350 INFO Added sources: [{'path': '/user/data/gent/vsc400/vsc40023/EasyBuild/sources/s/ScaLAPACK/scalapack-2.0.2.tgz', 'cmd': None, 'finalpath': '/tmp/vsc40023/easybuild_build/ScaLAPACK/2.0.2/gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.7.0', 'name': 'scalapack-2.0.2.tgz', 'checksum': None}] | |
| == 2017-01-04 17:13:58,628 easyblock.py:1487 INFO no patches provided | |
| == 2017-01-04 17:13:58,629 filetools.py:514 DEBUG Using blocksize 16777216 for calculating the checksum | |
| == 2017-01-04 17:13:58,640 easyblock.py:1496 INFO md5 checksum for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/s/ScaLAPACK/scalapack-2.0.2.tgz: 2f75e600a2ba155ed9ce974a1c4b536f | |
| == 2017-01-04 17:13:58,640 config.py:423 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules | |
| == 2017-01-04 17:13:58,640 easyblock.py:1513 INFO Checking dirs that need to be created: ['/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.7.0', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all/ScaLAPACK', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/numlib/ScaLAPACK'] | |
| == 2017-01-04 17:13:58,641 filetools.py:967 INFO Creating directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.7.0 (parents: True, set_gid: False, sticky: False) | |
| == 2017-01-04 17:13:58,642 filetools.py:995 DEBUG Not creating existing path /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all/ScaLAPACK | |
| == 2017-01-04 17:13:58,643 filetools.py:995 DEBUG Not creating existing path /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/numlib/ScaLAPACK | |
| == 2017-01-04 17:13:58,643 easyblock.py:2263 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True | |
| == 2017-01-04 17:13:58,643 build_log.py:216 INFO creating build dir, resetting environment... | |
| == 2017-01-04 17:13:58,643 easyblock.py:2271 INFO Starting ready step | |
| == 2017-01-04 17:13:58,643 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144e290> | |
| == 2017-01-04 17:13:58,644 templates.py:175 DEBUG version found in easyconfig is 2.0.2 | |
| == 2017-01-04 17:13:58,644 templates.py:219 DEBUG name: github_account, config: None | |
| == 2017-01-04 17:13:58,644 templates.py:219 DEBUG name: name, config: ScaLAPACK | |
| == 2017-01-04 17:13:58,644 templates.py:219 DEBUG name: version, config: 2.0.2 | |
| == 2017-01-04 17:13:58,644 templates.py:219 DEBUG name: versionsuffix, config: -OpenBLAS-0.2.19-LAPACK-3.7.0 | |
| == 2017-01-04 17:13:58,644 templates.py:219 DEBUG name: versionprefix, config: | |
| == 2017-01-04 17:13:58,644 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x144e290> | |
| == 2017-01-04 17:13:58,644 templates.py:175 DEBUG version found in easyconfig is 2.0.2 | |
| == 2017-01-04 17:13:58,644 templates.py:219 DEBUG name: github_account, config: None | |
| == 2017-01-04 17:13:58,645 templates.py:219 DEBUG name: name, config: ScaLAPACK | |
| == 2017-01-04 17:13:58,645 templates.py:219 DEBUG name: version, config: 2.0.2 | |
| == 2017-01-04 17:13:58,645 templates.py:219 DEBUG name: versionsuffix, config: -OpenBLAS-0.2.19-LAPACK-3.7.0 | |
| == 2017-01-04 17:13:58,645 templates.py:219 DEBUG name: versionprefix, config: | |
| == 2017-01-04 17:13:58,645 easyblock.py:2274 INFO Running method check_readiness_step part of step ready | |
| == 2017-01-04 17:13:58,645 easyblock.py:1396 DEBUG Desired parallelism specified via 'parallel' easyconfig parameter: 1 | |
| == 2017-01-04 17:13:58,645 easyblock.py:1404 INFO Setting parallelism: 1 | |
| == 2017-01-04 17:13:58,645 modules.py:634 DEBUG Current MODULEPATH: /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc | |
| == 2017-01-04 17:13:58,646 modules.py:641 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command | |
| == 2017-01-04 17:13:58,646 modules.py:641 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command | |
| == 2017-01-04 17:13:58,646 modules.py:645 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python --terse list' from /tmp/eb-B3gTBZ/tmpVJdC8l/hpcugent | |
| == 2017-01-04 17:13:58,678 modules.py:651 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python --terse list': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "LH0sfSxbInNob3J0Il09ImNsdXN0ZXIiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSx9LG1wYXRoQT17Ii91c2VyL2hvbWUvZ2VudC92c2M0MDAvdnNjNDAwMjMvZWJfcGhhbnB5c2NyYXRjaC9DTzcvaGFzd2VsbC1pYi9tb2R1bGVzL2FsbCIsIi9ldGMvbW9kdWxlZmlsZXMvdnNjIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9ldGMvbW9kdWxlZmlsZXMvdnNjIixbInZlcnNpb24iXT0yLH0="; | |
| os.environ["_ModuleTable_Sz_"] = "2"; | |
| ; stderr: cluster/golett | |
| == 2017-01-04 17:13:58,678 modules.py:968 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python --terse list' ran fine | |
| == 2017-01-04 17:13:58,679 modules.py:682 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to [] | |
| == 2017-01-04 17:13:58,679 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '') | |
| == 2017-01-04 17:13:58,679 modules.py:682 DEBUG Correcting paths in $LD_PRELOAD from [''] to [] | |
| == 2017-01-04 17:13:58,679 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
| == 2017-01-04 17:13:58,679 easyblock.py:1409 WARNING Loaded modules detected: ['cluster/golett'] | |
| == 2017-01-04 17:13:58,679 easyconfig.py:608 DEBUG Dependencies BEFORE filtering: [{'external_module_metadata': {}, 'full_mod_name': 'OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0', 'toolchain': {'version': '6.3.0-2.27', 'name': 'GCC'}, 'name': 'OpenBLAS', 'dummy': False, 'short_mod_name': 'OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0', 'external_module': False, 'versionsuffix': '-LAPACK-3.7.0', 'version': '0.2.19', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}] | |
| == 2017-01-04 17:13:58,679 toolchain.py:375 DEBUG add_dependencies: adding toolchain dependencies [{'external_module_metadata': {}, 'full_mod_name': 'OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0', 'toolchain': {'version': '6.3.0-2.27', 'name': 'GCC'}, 'name': 'OpenBLAS', 'dummy': False, 'short_mod_name': 'OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0', 'external_module': False, 'versionsuffix': '-LAPACK-3.7.0', 'version': '0.2.19', 'toolchain_inherited': False, 'hidden': False, 'build_only': False}] | |
| == 2017-01-04 17:13:58,680 modules.py:634 DEBUG Current MODULEPATH: /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc | |
| == 2017-01-04 17:13:58,680 modules.py:641 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command | |
| == 2017-01-04 17:13:58,680 modules.py:641 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command | |
| == 2017-01-04 17:13:58,680 modules.py:645 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python --terse --show-hidden avail OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0' from /tmp/eb-B3gTBZ/tmpVJdC8l/hpcugent | |
| == 2017-01-04 17:13:58,818 modules.py:651 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python --terse --show-hidden avail OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "LH0sfSxbInNob3J0Il09ImNsdXN0ZXIiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSx9LG1wYXRoQT17Ii91c2VyL2hvbWUvZ2VudC92c2M0MDAvdnNjNDAwMjMvZWJfcGhhbnB5c2NyYXRjaC9DTzcvaGFzd2VsbC1pYi9tb2R1bGVzL2FsbCIsIi9ldGMvbW9kdWxlZmlsZXMvdnNjIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9ldGMvbW9kdWxlZmlsZXMvdnNjIixbInZlcnNpb24iXT0yLH0="; | |
| os.environ["_ModuleTable_Sz_"] = "2"; | |
| ; stderr: | |
| == 2017-01-04 17:13:58,819 modules.py:968 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python --terse --show-hidden avail OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0' ran fine | |
| == 2017-01-04 17:13:58,819 modules.py:682 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to [] | |
| == 2017-01-04 17:13:58,819 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '') | |
| == 2017-01-04 17:13:58,819 modules.py:682 DEBUG Correcting paths in $LD_PRELOAD from [''] to [] | |
| == 2017-01-04 17:13:58,819 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
| == 2017-01-04 17:13:58,820 modules.py:426 DEBUG 'module available OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0' gave 0 answers: [] | |
| == 2017-01-04 17:13:58,820 modules.py:634 DEBUG Current MODULEPATH: /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc | |
| == 2017-01-04 17:13:58,820 modules.py:641 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command | |
| == 2017-01-04 17:13:58,820 modules.py:641 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command | |
| == 2017-01-04 17:13:58,820 modules.py:645 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python show OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0' from /tmp/eb-B3gTBZ/tmpVJdC8l/hpcugent | |
| == 2017-01-04 17:13:58,950 modules.py:651 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python show OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "LH0sfSxbInNob3J0Il09ImNsdXN0ZXIiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSx9LG1wYXRoQT17Ii91c2VyL2hvbWUvZ2VudC92c2M0MDAvdnNjNDAwMjMvZWJfcGhhbnB5c2NyYXRjaC9DTzcvaGFzd2VsbC1pYi9tb2R1bGVzL2FsbCIsIi9ldGMvbW9kdWxlZmlsZXMvdnNjIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9ldGMvbW9kdWxlZmlsZXMvdnNjIixbInZlcnNpb24iXT0yLH0="; | |
| os.environ["_ModuleTable_Sz_"] = "2"; | |
| ; stderr: Failed to find the following module(s): "OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0" in your MODULEPATH | |
| Try: | |
| "module spider OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0" | |
| to see if the module(s) are available across all compilers and MPI implementations. | |
| == 2017-01-04 17:13:58,950 modules.py:968 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python show OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0' ran fine | |
| == 2017-01-04 17:13:58,951 modules.py:539 DEBUG Cached result for 'module show OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0' with key '('MODULEPATH=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc', 'lmod', 'OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0')': os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["LMOD_DEFAULT_MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["MODULEPATH"] = "/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "LH0sfSxbInNob3J0Il09ImNsdXN0ZXIiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSx9LG1wYXRoQT17Ii91c2VyL2hvbWUvZ2VudC92c2M0MDAvdnNjNDAwMjMvZWJfcGhhbnB5c2NyYXRjaC9DTzcvaGFzd2VsbC1pYi9tb2R1bGVzL2FsbCIsIi9ldGMvbW9kdWxlZmlsZXMvdnNjIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9ldGMvbW9kdWxlZmlsZXMvdnNjIixbInZlcnNpb24iXT0yLH0="; | |
| os.environ["_ModuleTable_Sz_"] = "2"; | |
| Failed to find the following module(s): "OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0" in your MODULEPATH | |
| Try: | |
| "module spider OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0" | |
| to see if the module(s) are available across all compilers and MPI implementations. | |
| == 2017-01-04 17:13:58,951 toolchain.py:392 DEBUG add_dependencies: MODULEPATH: /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc | |
| == 2017-01-04 17:13:58,952 build_log.py:147 ERROR EasyBuild crashed with an error (at ?:124 in __init__): Missing modules for one or more dependencies: OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0 (at easybuild/tools/toolchain/toolchain.py:400 in add_dependencies) | |
| == 2017-01-04 17:13:58,952 easyblock.py:2503 WARNING build failed (first 300 chars): Missing modules for one or more dependencies: OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0 | |
| == 2017-01-04 17:13:58,952 easyblock.py:276 INFO Closing log for application name ScaLAPACK version 2.0.2 |
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