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February 29, 2012 11:38
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MIxS version 2012-02-19 RDF including DwC terms
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<?xml version="1.0" encoding="UTF-8"?> | |
<?xml-stylesheet type="text/xsl" href="human.xsl"?> | |
<!DOCTYPE rdf:RDF [ | |
<!ENTITY rdfns 'http://www.w3.org/1999/02/22-rdf-syntax-ns#'> | |
<!ENTITY rdfsns 'http://www.w3.org/2000/01/rdf-schema#'> | |
<!ENTITY dctermsns 'http://purl.org/dc/terms/'> | |
<!ENTITY dctypens 'http://purl.org/dc/dcmitype/'> | |
<!ENTITY dwcattributesns 'http://rs.tdwg.org/dwc/terms/attributes/'> | |
<!-- | |
<!ENTITY skosns 'http://www.w3.org/2004/02/skos/core#'> | |
<!ENTITY vsns 'http://www.w3.org/2003/06/sw-vocab-status/ns#'> | |
--> | |
]> | |
<rdf:RDF | |
xmlns:dwcattributes="http://rs.tdwg.org/dwc/terms/attributes/" | |
xmlns:dcterms="http://purl.org/dc/terms/" | |
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" | |
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" | |
xml:base="http://rs.tdwg.org/dwc/terms/"> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/terms/"> | |
<dcterms:title xml:lang="en-US">MIxS namespace for terms in the http://gensc.org/ns/mixs/terms/ | |
namespace</dcterms:title> | |
<rdfs:comment>To comment on this schema, please create a new issue in http://mixs.gensc.org</rdfs:comment> | |
<dcterms:publisher xml:lang="en-US">Genomics Standards Consortium (GSC)</dcterms:publisher> | |
<dcterms:modified>2012-02-29</dcterms:modified> | |
</rdf:Description> | |
<!-- | |
Each RDF description uses the following: | |
rdfs:label | |
rdfs:comment | |
dcterms:description | |
rdfs:isDefinedBy | |
dcterms:issued | |
dcterms:modified | |
rdf:type | |
dcterms:hasVersion | |
rdfs:range | |
rdfs:subPropertyOf | |
rdfs:domain | |
dcterms:replaces | |
rdfs:seeAlso (for ABCD mapping) | |
dwcattributes:status | |
dwcattributes:decision | |
// potentially useful | |
skos = http://www.w3.org/2004/02/skos/core# | |
skos:example | |
vs = http://www.w3.org/2003/06/sw-vocab-status/ns# | |
vs:term_status | |
--> | |
<!-- Versioned Mutable RDF goes here --> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/adapters-2011-01-26"> <rdfs:label | |
xml:lang="en-US">adapters</rdfs:label> <rdfs:comment xml:lang="en-US">Adapters provide priming sequences for | |
both amplification and sequencing of the sample-library fragments. Both adapters should be reported; in | |
uppercase letters</rdfs:comment> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#adapters-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/alt_elev-2011-01-26"> <rdfs:label | |
xml:lang="en-US">geographic location (altitude/elevation)</rdfs:label> <rdfs:comment xml:lang="en-US">Please | |
refer to the definitions of either altitude or elevation in the environmental packages</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#alt_elev-2011-01-26"/> | |
<dwcattributes:status>deprecated</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="Occurrence"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/annot_source-2011-01-26"> <rdfs:label | |
xml:lang="en-US">annotation source</rdfs:label> <rdfs:comment xml:lang="en-US">For cases where annotation was | |
provided by a community jamboree or model organism database rather than by a specific submitter</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#annot_source-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/assembly_name-2011-01-26"> <rdfs:label | |
xml:lang="en-US">assembly name</rdfs:label> <rdfs:comment xml:lang="en-US">Name/version of the assembly | |
provided by the submitter that is used in the genome browsers and in the community</rdfs:comment> | |
<dcterms:description xml:lang="en-US">HuRef, JCVI_ISG_i3_1.0</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#assembly_name-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/assembly-2011-01-26"> <rdfs:label | |
xml:lang="en-US">assembly</rdfs:label> <rdfs:comment xml:lang="en-US">How was the assembly done (e.g. with a | |
text based assembler like phrap or a flowgram assembler); estimated error rate associated with the finished | |
sequences (e.g. error rate of 1 in 1000 bp); and the method of calculation</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#assembly-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://rs.tdwg.org/dwc/terms/associatedReferences-2009-04-24"> <rdfs:label | |
xml:lang="en-US">Associated References</rdfs:label> <rdfs:comment xml:lang="en-US">A list (concatenated and | |
separated) of identifiers (publication, bibliographic reference, global unique identifier, URI) of literature | |
associated with the Occurrence.</rdfs:comment> <dcterms:description xml:lang="en-US">Examples: | |
"http://www.sciencemag.org/cgi/content/abstract/322/5899/261", "Christopher J. Conroy, Jennifer L. Neuwald. | |
2008. Phylogeographic study of the California vole, Microtus californicus Journal of Mammalogy, | |
89(3):755-767."</dcterms:description> <rdfs:isDefinedBy rdf:resource="http://rs.tdwg.org/dwc/terms/"/> | |
<dcterms:issued>2008-11-19</dcterms:issued> <dcterms:modified>2009-04-24</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://rs.tdwg.org/dwc/terms/history/#associatedReferences-2009-04-24"/> | |
<dcterms:replaces rdf:resource="http://gensc.org/ns/mixs/url-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> | |
<dwcattributes:abcdEquivalence>DataSets/DataSet/Units/Unit/UnitReferences</dwcattributes:abcdEquivalence> | |
<dwcattributes:organizedInClass rdf:resource="http://rs.tdwg.org/dwc/terms/Occurrence"/> | |
</rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/biotic_relationship-2011-01-26"> <rdfs:label | |
xml:lang="en-US">observed biotic relationship</rdfs:label> <rdfs:comment xml:lang="en-US">Is it free-living | |
or in a host and if the latter what type of relationship is observed</rdfs:comment> <dcterms:description | |
xml:lang="en-US">"</dcterms:description> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#biotic_relationship-2011-01-26"/> | |
<dwcattributes:status>deprecated</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="Occurrence"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/chimera_check-2011-01-26"> <rdfs:label | |
xml:lang="en-US">chimera check</rdfs:label> <rdfs:comment xml:lang="en-US">A chimeric sequence, or chimera | |
for short, is a sequence comprised of two or more phylogenetically distinct parent sequences. Chimeras are | |
usually PCR artifacts thought to occur when a prematurely terminated amplicon reanneals to a foreign DNA strand | |
and is copied to completion in the following PCR cycles. The point at which the chimeric sequence changes from | |
one parent to the next is called the breakpoint or conversion point</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#chimera_check-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/collection_date-2011-01-26"> <rdfs:label | |
xml:lang="en-US">collection date</rdfs:label> <rdfs:comment xml:lang="en-US">The time of sampling, either as | |
an instance (single point in time) or interval. In case no exact time is available, the date/time can be right | |
truncated i.e. all of these are valid times: 2008-01-23T19:23:10+00:00; 2008-01-23T19:23:10; 2008-01-23; | |
2008-01; 2008; Except: 2008-01; 2008 all are ISO8601 compliant</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#collection_date-2011-01-26"/> | |
<dwcattributes:status>deprecated</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="Occurrence"/> </rdf:Description> | |
<rdf:Description rdf:about="http://rs.tdwg.org/dwc/terms/collectionCode-2009-09-11"> <rdfs:label | |
xml:lang="en-US">Collection Code</rdfs:label> <rdfs:comment xml:lang="en-US">The name, acronym, coden, or | |
initialism identifying the collection or data set from which the record was derived.</rdfs:comment> | |
<dcterms:description xml:lang="en-US">Examples: "Mammals", "Hildebrandt", "eBird"</dcterms:description> | |
<rdfs:isDefinedBy rdf:resource="http://rs.tdwg.org/dwc/terms/"/> | |
<dcterms:issued>2008-11-19</dcterms:issued> <dcterms:modified>2009-09-11</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://rs.tdwg.org/dwc/terms/history/#collectionCode-2009-09-11"/> | |
<rdfs:subPropertyOf rdf:resource="http://rs.tdwg.org/ncd/terms/Collection#Code"/> | |
<dcterms:replaces rdf:resource="http://gensc.org/ns/mixs/source_mat_id-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> | |
<dwcattributes:abcdEquivalence>DataSets/DataSet/Units/Unit/SourceID</dwcattributes:abcdEquivalence> | |
<dwcattributes:organizedInClass rdf:resource="all"/> </rdf:Description> | |
<rdf:Description rdf:about="http://rs.tdwg.org/dwc/terms/datasetName-2009-09-11"> <rdfs:label | |
xml:lang="en-US">Dataset Name</rdfs:label> <rdfs:comment xml:lang="en-US">The name identifying the data set | |
from which the record was derived.</rdfs:comment> <dcterms:description xml:lang="en-US">Examples: | |
"Grinnell Resurvey Mammals", "Lacey Ctenomys Recaptures"</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://rs.tdwg.org/dwc/terms/"/> <dcterms:issued>2009-09-11</dcterms:issued> | |
<dcterms:modified>2009-09-11</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://rs.tdwg.org/dwc/terms/history/#datasetName-2009-09-11"/> | |
<dwcattributes:status>recommended</dwcattributes:status> | |
<dwcattributes:abcdEquivalence>DataSets/DataSet/Units/Unit/SourceID</dwcattributes:abcdEquivalence> | |
<dwcattributes:organizedInClass rdf:resource="all"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/depth-2011-01-26"> <rdfs:label xml:lang="en-US">geographic | |
location (depth)</rdfs:label> <rdfs:comment xml:lang="en-US">Please refer to the definitions of depth in the | |
environmental packages</rdfs:comment> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#depth-2011-01-26"/> | |
<dwcattributes:status>deprecated</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="Occurrence"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/encoded_traits-2011-01-26"> <rdfs:label | |
xml:lang="en-US">encoded traits</rdfs:label> <rdfs:comment xml:lang="en-US">Should include key traits like | |
antibiotic resistance or xenobiotic degradation phenotypes for plasmids, converting genes for | |
phage</rdfs:comment> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#encoded_traits-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/env_biome-2011-01-26"> <rdfs:label | |
xml:lang="en-US">environment (biome)</rdfs:label> <rdfs:comment xml:lang="en-US">In environmental biome | |
level are the major classes of ecologically similar communities of plants, animals, and other organisms. Biomes | |
are defined based on factors such as plant structures, leaf types, plant spacing, and other factors like | |
climate. Examples include: desert, taiga, deciduous woodland, or coral reef. EnvO (v1.53) terms listed under | |
environmental biome can be found from the link: | |
http://bioportal.bioontology.org/visualize/44405/?conceptid=ENVO%3A00000428</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#env_biome-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/env_feature-2011-01-26"> <rdfs:label | |
xml:lang="en-US">environment (feature)</rdfs:label> <rdfs:comment xml:lang="en-US">Environmental feature | |
level includes geographic environmental features. Examples include: harbor, cliff, or lake. EnvO (v1.53) terms | |
listed under environmental feature can be found from the link: | |
http://bioportal.bioontology.org/visualize/44405/?conceptid=ENVO%3A00002297</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#env_feature-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/env_material-2011-01-26"> <rdfs:label | |
xml:lang="en-US">environment (material)</rdfs:label> <rdfs:comment xml:lang="en-US">The environmental | |
material level refers to the matter that was displaced by the sample, prior to the sampling event. Environmental | |
matter terms are generally mass nouns. Examples include: air, soil, or water. EnvO (v1.53) terms listed under | |
environmental matter can be found from the link: | |
http://bioportal.bioontology.org/visualize/44405/?conceptid=ENVO%3A00010483</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#env_material-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/env_package-2011-01-26"> <rdfs:label | |
xml:lang="en-US">environmental package</rdfs:label> <rdfs:comment xml:lang="en-US">MIGS/MIMS/MIENS extension | |
for reporting of measurements and observations obtained from one or more of the environments where the sample | |
was obtained. All environmental packages listed here are further defined in separate subtables. By giving the | |
name of the environmental package, a selection of fields can be made from the subtables and can be | |
reported</rdfs:comment> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#env_package-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://rs.tdwg.org/dwc/terms/establishmentMeans-2009-04-24"> <rdfs:label | |
xml:lang="en-US">Establishment Means</rdfs:label> <rdfs:comment xml:lang="en-US">The process by which the | |
biological individual(s) represented in the Occurrence became established at the location. Recommended best | |
practice is to use a controlled vocabulary.</rdfs:comment> <dcterms:description xml:lang="en-US">Examples: | |
"cultivated", "invasive", "escaped from captivity", "wild", "native"</dcterms:description> | |
<rdfs:isDefinedBy rdf:resource="http://rs.tdwg.org/dwc/terms/"/> | |
<dcterms:issued>2008-11-19</dcterms:issued> <dcterms:modified>2009-04-24</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://rs.tdwg.org/dwc/terms/history/#establishmentMeans-2009-04-24"/> | |
<dcterms:replaces rdf:resource="http://gensc.org/ns/mixs/biotic_relationship-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> | |
<dwcattributes:abcdEquivalence>DataSets/DataSet/Units/Unit/Gathering/EstablishmentMeans</dwcattributes:abcdEquiv | |
alence> <dwcattributes:organizedInClass rdf:resource="http://rs.tdwg.org/dwc/terms/Occurrence"/> | |
</rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/estimated_size-2011-01-26"> <rdfs:label | |
xml:lang="en-US">estimated size</rdfs:label> <rdfs:comment xml:lang="en-US">The estimated size of the genome | |
prior to sequencing. Of particular importance in the sequencing of (eukaryotic) genome which could remain in | |
draft form for a long or unspecified period.</rdfs:comment> <dcterms:description xml:lang="en-US">300000 | |
bp</dcterms:description> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#estimated_size-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://rs.tdwg.org/dwc/terms/eventDate-2009-04-24"> <rdfs:label | |
xml:lang="en-US">Event Date</rdfs:label> <rdfs:comment xml:lang="en-US">The date-time or interval during | |
which an Event occurred. For occurrences, this is the date-time when the event was recorded. Not suitable for a | |
time in a geological context. Recommended best practice is to use an encoding scheme, such as ISO | |
8601:2004(E).</rdfs:comment> <dcterms:description xml:lang="en-US">Examples: "1963-03-08T14:07-0600" is 8 Mar | |
1963 2:07pm in the time zone six hours earlier than UTC, "2009-02-20T08:40Z" is 20 Feb 2009 8:40am UTC, | |
"1809-02-12" is 12 Feb 1809, "1906-06" is Jun 1906, "1971" is just that year, | |
"2007-03-01T13:00:00Z/2008-05-11T15:30:00Z" is the interval between 1 Mar 2007 1pm UTC and 11 May 2008 3:30pm | |
UTC, "2007-11-13/15" is the interval between 13 Nov 2007 and 15 Nov 2007.</dcterms:description> | |
<rdfs:isDefinedBy rdf:resource="http://rs.tdwg.org/dwc/terms/"/> | |
<dcterms:issued>2009-04-24</dcterms:issued> <dcterms:modified>2009-07-01</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://rs.tdwg.org/dwc/terms/history/#eventDate-2009-04-24"/> <rdfs:subPropertyOf | |
rdf:resource="http://purl.org/dc/terms/date"/> <dcterms:replaces | |
rdf:resource="http://gensc.org/ns/mixs/collection_date-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> | |
<dwcattributes:abcdEquivalence>DataSets/DataSet/Units/Unit/Gathering/ISODateTimeBegin</dwcattributes:abcdEquival | |
ence> <dwcattributes:organizedInClass rdf:resource="http://rs.tdwg.org/dwc/terms/Event"/> | |
</rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/experimental_factor-2011-01-26"> <rdfs:label | |
xml:lang="en-US">experimental factor</rdfs:label> <rdfs:comment xml:lang="en-US">Experimental factors are | |
essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of | |
experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor | |
Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v132) terms, please | |
see http://bioportal.bioontology.org/visualize/44641; for a browser of OBI (v1.0) terms please see | |
http://bioportal.bioontology.org/visualize/40832</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#experimental_factor-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/extrachrom_elements-2011-01-26"> <rdfs:label | |
xml:lang="en-US">extrachromosomal elements</rdfs:label> <rdfs:comment xml:lang="en-US">Do plasmids exist of | |
significant phenotypic consequence (e.g. ones that determine virulence or antibiotic resistance). Megaplasmids? | |
Other plasmids (borrelia has 15+ plasmids)</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#extrachrom_elements-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/finishing_strategy-2011-01-26"> <rdfs:label | |
xml:lang="en-US">finishing strategy</rdfs:label> <rdfs:comment xml:lang="en-US">Was the genome project | |
intended to produce a complete or draft genome, Coverage, the fold coverage of the sequencing expressed as 2x, | |
3x, 18x etc, and how many contigs were produced for the genome</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#finishing_strategy-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/geo_loc_name-2011-01-26"> <rdfs:label | |
xml:lang="en-US">geographic location (country and/or sea,region)</rdfs:label> <rdfs:comment | |
xml:lang="en-US">The geographical origin of the sample as defined by the country or sea name followed by | |
specific region name. Country or sea names should be chosen from the INSDC country list | |
(http://insdc.org/country.html), or the GAZ ontology (v1.446) | |
(http://bioportal.bioontology.org/visualize/40651)</rdfs:comment> <dcterms:description | |
xml:lang="en-US">Germany:Sylt:Hausstrand</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#geo_loc_name-2011-01-26"/> | |
<dwcattributes:status>deprecated</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="Occurrence"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/health_disease_stat-2011-01-26"> <rdfs:label | |
xml:lang="en-US">health or disease status of specific host at time of collection</rdfs:label> <rdfs:comment | |
xml:lang="en-US">Health or disease status of specific host at time of collection. This field accepts PATO | |
(v1.269) terms, for a browser please see http://bioportal.bioontology.org/visualize/44601 | |
</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#health_disease_stat-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/host_spec_range-2011-01-26"> <rdfs:label | |
xml:lang="en-US">host specificity or range</rdfs:label> <rdfs:comment xml:lang="en-US">The NCBI taxonomy | |
identifier of the specific host if it is known</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#host_spec_range-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/investigation_type-2011-01-26"> <rdfs:label | |
xml:lang="en-US">investigation type</rdfs:label> <rdfs:comment xml:lang="en-US">Nucleic Acid Sequence | |
Report is the root element of all MIGS/MIMS compliant reports as standardized by Genomic Standards Consortium. | |
This field is either eukaryote,bacteria,virus,plasmid,organelle, metagenome, miens-survey or | |
miens-specimen</rdfs:comment> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#investigation_type-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/isol_growth_condt-2011-01-26"> <rdfs:label | |
xml:lang="en-US">isolation and growth condition</rdfs:label> <rdfs:comment xml:lang="en-US">Publication | |
reference in the form of pubmed ID (pmid), digital object identifier (doi) or url for isolation and growth | |
condition specifications of the organism/material</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#isol_growth_condt-2011-01-26"/> | |
<dwcattributes:status>deprecated</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="Occurrence"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/lat_lon-2011-01-26"> <rdfs:label | |
xml:lang="en-US">geographic location (latitude and longitude)</rdfs:label> <rdfs:comment | |
xml:lang="en-US">The geographical origin of the sample as defined by latitude and longitude. The values should | |
be reported in decimal degrees and in WGS84 system</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#lat_lon-2011-01-26"/> | |
<dwcattributes:status>deprecated</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="Occurrence"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/lib_const_meth-2011-01-26"> <rdfs:label | |
xml:lang="en-US">library construction method</rdfs:label> <rdfs:comment xml:lang="en-US">Library | |
construction method used for clone libraries</rdfs:comment> <dcterms:description | |
xml:lang="en-US">paired-end,single,vector</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#lib_const_meth-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/lib_reads_seqd-2011-01-26"> <rdfs:label | |
xml:lang="en-US">library reads sequenced</rdfs:label> <rdfs:comment xml:lang="en-US">Total number of clones | |
sequenced from the library</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#lib_reads_seqd-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/lib_screen-2011-01-26"> <rdfs:label | |
xml:lang="en-US">library screening strategy</rdfs:label> <rdfs:comment xml:lang="en-US">Specific | |
enrichment or screening methods applied before and/or after creating clone libraries</rdfs:comment> | |
<dcterms:description xml:lang="en-US">enriched, screened, normalized</dcterms:description> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#lib_screen-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/lib_size-2011-01-26"> <rdfs:label | |
xml:lang="en-US">library size</rdfs:label> <rdfs:comment xml:lang="en-US">Total number of clones in the | |
library prepared for the project</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#lib_size-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/lib_vector-2011-01-26"> <rdfs:label | |
xml:lang="en-US">library vector</rdfs:label> <rdfs:comment xml:lang="en-US">Cloning vector type(s) used in | |
construction of libraries</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#lib_vector-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://rs.tdwg.org/dwc/terms/locality-2009-04-24"> <rdfs:label | |
xml:lang="en-US">Locality</rdfs:label> <rdfs:comment xml:lang="en-US">The specific description of the place. | |
Less specific geographic information can be provided in other geographic terms (higherGeography, continent, | |
country, stateProvince, county, municipality, waterBody, island, islandGroup). This term may contain information | |
modified from the original to correct perceived errors or standardize the description.</rdfs:comment> | |
<dcterms:description xml:lang="en-US">Example: "Bariloche, 25 km NNE via Ruta Nacional 40 (=Ruta | |
237)"</dcterms:description> <rdfs:isDefinedBy rdf:resource="http://rs.tdwg.org/dwc/terms/"/> | |
<dcterms:issued>2008-11-19</dcterms:issued> <dcterms:modified>2009-04-24</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://rs.tdwg.org/dwc/terms/history/#locality-2009-04-24"/> | |
<dcterms:replaces rdf:resource="http://gensc.org/ns/mixs/locality-2009-04-24"/> | |
<dwcattributes:status>recommended</dwcattributes:status> | |
<dwcattributes:abcdEquivalence>DataSets/DataSet/Units/Unit/Gathering/NamedAreas/NamedArea/AreaName</dwcattribute | |
s:abcdEquivalence> <dwcattributes:organizedInClass rdf:resource="http://purl.org/dc/terms/Location"/> | |
</rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/mid-2011-01-26"> <rdfs:label xml:lang="en-US">multiplex | |
identifiers</rdfs:label> <rdfs:comment xml:lang="en-US">Molecular barcodes, called Multiplex Identifiers | |
(MIDs), that are used to specifically tag unique samples in a sequencing run. Sequence should be reported in | |
uppercase letters</rdfs:comment> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#mid-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/nucl_acid_amp-2011-01-26"> <rdfs:label | |
xml:lang="en-US">nucleic acid amplification</rdfs:label> <rdfs:comment xml:lang="en-US">Link to a | |
literature reference, electronic resource or a standard operating procedure (SOP)</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#nucl_acid_amp-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/nucl_acid_ext-2011-01-26"> <rdfs:label | |
xml:lang="en-US">nucleic acid extraction</rdfs:label> <rdfs:comment xml:lang="en-US">Link to a literature | |
reference, electronic resource or a standard operating procedure (SOP)</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#nucl_acid_ext-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/num_replicons-2011-01-26"> <rdfs:label | |
xml:lang="en-US">number of replicons</rdfs:label> <rdfs:comment xml:lang="en-US">Reports the number of | |
replicons in a nuclear genome of eukaryotes, in the genome of a bacterium or archaea or the number of segments | |
in a segmented virus. Always applied to the haploid chromosome count of a eukaryote</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#num_replicons-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/pathogenicity-2011-01-26"> <rdfs:label | |
xml:lang="en-US">known pathogenicity</rdfs:label> <rdfs:comment xml:lang="en-US">To what is the entity | |
pathogenic.</rdfs:comment> <dcterms:description xml:lang="en-US">human, animal, plant, fungi, | |
bacteria</dcterms:description> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#pathogenicity-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/pcr_cond-2011-01-26"> <rdfs:label xml:lang="en-US">pcr | |
conditions</rdfs:label> <rdfs:comment xml:lang="en-US">Description of reaction conditions and components for PCR | |
in the form of 'initial denaturation:94degC_1.5min; annealing=...'</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#pcr_cond-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/pcr_primers-2011-01-26"> <rdfs:label xml:lang="en-US">pcr | |
primers</rdfs:label> <rdfs:comment xml:lang="en-US">PCR primers that were used to amplify the sequence of the | |
targeted gene, locus or subfragment. This field should contain all the primers used for a single PCR reaction if | |
multiple forward or reverse primers are present in a single PCR reaction. The primer sequence should be reported | |
in uppercase letters</rdfs:comment> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#pcr_primers-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/ploidy-2011-01-26"> <rdfs:label | |
xml:lang="en-US">ploidy</rdfs:label> <rdfs:comment xml:lang="en-US">The ploidy level of the genome (e.g. | |
allopolyploid, haploid, diploid, triploid, tetraploid). It has implications for the downstream study of | |
duplicated gene and regions of the genomes (and perhaps for difficulties in assembly). For terms, please select | |
terms listed under class ploidy (PATO:001374) of Phenotypic Quality Ontology (PATO), and for a browser of PATO | |
(v1.269) please refer to | |
http://bioportal.bioontology.org/visualize/44601/?conceptid=PATO%3A0001374</rdfs:comment> | |
<dcterms:description xml:lang="en-US">allopolyploid, polyploid</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#ploidy-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/project_name-2011-01-26"> <rdfs:label | |
xml:lang="en-US">project name</rdfs:label> <rdfs:comment xml:lang="en-US">Name of the project within which | |
the sequencing was organized</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#project_name-2011-01-26"/> | |
<dwcattributes:status>deprecated</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="Occurrence"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/propagation-2011-01-26"> <rdfs:label | |
xml:lang="en-US">propagation</rdfs:label> <rdfs:comment xml:lang="en-US">This field is specific to | |
different taxa. For phages: lytic/lysogenic, for plasmids: incompatibility group (Note: there is the strong | |
opinion to name phage propagation obligately lytic or temperate, therefore we also give this | |
choice</rdfs:comment> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#propagation-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/ref_biomaterial-2011-01-26"> <rdfs:label | |
xml:lang="en-US">reference for biomaterial</rdfs:label> <rdfs:comment xml:lang="en-US">primary publication if | |
isolated before genome publication; otherwise, primary genome report</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#ref_biomaterial-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/rel_to_oxygen-2011-01-26"> <rdfs:label | |
xml:lang="en-US">relationship to oxygen</rdfs:label> <rdfs:comment xml:lang="en-US">Is this organism an | |
aerobe, anaerobe? Please note that aerobic and anaerobic are valid descriptors for microbial | |
environments</rdfs:comment> <dcterms:description xml:lang="en-US">'</dcterms:description> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#rel_to_oxygen-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/samp_collect_device-2011-01-26"> <rdfs:label | |
xml:lang="en-US">sample collection device or method</rdfs:label> <rdfs:comment xml:lang="en-US">The | |
method or device employed for collecting the sample</rdfs:comment> <dcterms:description | |
xml:lang="en-US">biopsy, niskin bottle, push core</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#samp_collect_device-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/samp_mat_process-2011-01-26"> <rdfs:label | |
xml:lang="en-US">sample material processing</rdfs:label> <rdfs:comment xml:lang="en-US">Any processing | |
applied to the sample during or after retrieving the sample from environment. This field accepts OBI, for a | |
browser of OBI (v1.0) terms please see http://bioportal.bioontology.org/visualize/40832</rdfs:comment> | |
<dcterms:description xml:lang="en-US">filtering of seawater, storing samples in ethanol</dcterms:description> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#samp_mat_process-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/samp_size-2011-01-26"> <rdfs:label | |
xml:lang="en-US">amount or size of sample collected</rdfs:label> <rdfs:comment xml:lang="en-US">Amount or | |
size of sample (volume, mass or area) that was collected</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#samp_size-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://rs.tdwg.org/dwc/terms/samplingProtocol-2009-04-24"> <rdfs:label | |
xml:lang="en-US">Sampling Protocol</rdfs:label> <rdfs:comment xml:lang="en-US">The name of, reference to, or | |
description of the method or protocol used during an Event.</rdfs:comment> <dcterms:description | |
xml:lang="en-US">Examples: "UV light trap", "mist net", "bottom trawl", "ad hoc observation", "point count", | |
"Penguins from space: faecal stains reveal the location of emperor penguin colonies, | |
http://dx.doi.org/10.1111/j.1466-8238.2009.00467.x", "Takats et al. 2001. Guidelines for Nocturnal Owl | |
Monitoring in North America. Beaverhill Bird Observatory and Bird Studies Canada, Edmonton, Alberta. 32 pp.", | |
"http://www.bsc-eoc.org/download/Owl.pdf"</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://rs.tdwg.org/dwc/terms/"/> <dcterms:issued>2008-11-19</dcterms:issued> | |
<dcterms:modified>2009-04-24</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://rs.tdwg.org/dwc/terms/history/#samplingProtocol-2009-04-24"/> | |
<dcterms:replaces rdf:resource="http://gensc.org/ns/mixs/isol_growth_condt-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> | |
<dwcattributes:abcdEquivalence>DataSets/DataSet/Units/Unit/Gathering/Method</dwcattributes:abcdEquivalence> | |
<dwcattributes:organizedInClass rdf:resource="http://rs.tdwg.org/dwc/terms/Event"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/seq_meth-2011-01-26"> <rdfs:label | |
xml:lang="en-US">sequencing method</rdfs:label> <rdfs:comment xml:lang="en-US">Sequencing method used; e.g. | |
Sanger, pyrosequencing, ABI-solid</rdfs:comment> <dcterms:description xml:lang="en-US">Sanger | |
dideoxysequencing, pyrosequencing, polony</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#seq_meth-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/seq_quality_check-2011-01-26"> <rdfs:label | |
xml:lang="en-US">sequence quality check</rdfs:label> <rdfs:comment xml:lang="en-US">Indicate if the sequence | |
has been called by automatic systems (none) or undergone a manual editing procedure (e.g. by inspecting the raw | |
data or chromatograms). Applied only for sequences that are not submitted to SRA,ENA or DRA</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#seq_quality_check-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/sop-2011-01-26"> <rdfs:label xml:lang="en-US">relevant | |
standard operating procedures</rdfs:label> <rdfs:comment xml:lang="en-US">Standard operating procedures | |
used in assembly and/or annotation of genomes, metagenomes or environmental sequences</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#sop-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/source_mat_id-2011-01-26"> <rdfs:label | |
xml:lang="en-US">source material identifiers</rdfs:label> <rdfs:comment xml:lang="en-US">The name of the | |
culture collection, holder of the voucher or an institution. Could enumerate a list of common resources, just as | |
the American Type Culture Collection (ATCC), German Collection of Microorganisms and Cell Cultures (DSMZ) etc. | |
Can select not deposited</rdfs:comment> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#source_mat_id-2011-01-26"/> | |
<dwcattributes:status>deprecated</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="Occurrence"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/specific_host-2011-01-26"> <rdfs:label | |
xml:lang="en-US">specific host</rdfs:label> <rdfs:comment xml:lang="en-US">If there is a host involved, | |
please provide its taxid (or environmental if not actually isolated from the dead or alive host - i.e. pathogen | |
could be isolated from a swipe of a bench etc) and report whether it is a laboratory or natural host). From this | |
we can calculate any number of groupings of hosts (e.g. animal vs plant, all fish hosts, etc)</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#specific_host-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/submitted_to_insdc-2011-01-26"> <rdfs:label | |
xml:lang="en-US">submitted to insdc</rdfs:label> <rdfs:comment xml:lang="en-US">Depending on the study | |
(large-scale e.g. done with next generation sequencing technology, or small-scale) sequences have to be | |
submitted to SRA (Sequence Read Archive), DRA (DDBJ Read Archive) or via the classical Webin/Sequin systems to | |
Genbank, ENA and DDBJ. | |
Although this field is mandatory, it is meant as a "self-test" field, therefore it is not | |
necessary to include this field in contextual data submitted to databases</rdfs:comment> | |
<rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#submitted_to_insdc-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/subspecf_gen_lin-2011-01-26"> <rdfs:label | |
xml:lang="en-US">subspecific genetic lineage</rdfs:label> <rdfs:comment xml:lang="en-US">This should | |
provide further information about the genetic distinctness of this lineage by recording additional information | |
i.e biovar, serovar, serotype, biovar, or any relevant genetic typing schemes like Group I plasmid. It can also | |
contain alternative taxonomic information</rdfs:comment> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#subspecf_gen_lin-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/target_gene-2011-01-26"> <rdfs:label | |
xml:lang="en-US">target gene</rdfs:label> <rdfs:comment xml:lang="en-US">Targeted gene or locus name for | |
marker gene studies</rdfs:comment> <dcterms:description xml:lang="en-US">16S rRNA, 18S rRNA, nif, amoA, | |
rpo</dcterms:description> <rdfs:isDefinedBy rdf:resource="http://gensc.org/ns/mixs/"/> | |
<dcterms:issued>2011-1-26</dcterms:issued> <dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#target_gene-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/target_subfragment-2011-01-26"> <rdfs:label | |
xml:lang="en-US">target subfragment</rdfs:label> <rdfs:comment xml:lang="en-US">Name of subfragment of a | |
gene or locus. Important to e.g. identify special regions on marker genes like V6 on 16S rRNA</rdfs:comment> | |
<dcterms:description xml:lang="en-US">V6, V9, ITS</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#target_subfragment-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/Sample"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/trophic_level-2011-01-26"> <rdfs:label | |
xml:lang="en-US">trophic level</rdfs:label> <rdfs:comment xml:lang="en-US">Trophic levels are the feeding | |
position in a food chain. Microbes can be a range of producers (e.g. chemolithotroph)</rdfs:comment> | |
<dcterms:description xml:lang="en-US">"</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#trophic_level-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="http://gensc.org/ns/mixs/TaxonAbundance"/> </rdf:Description> | |
<rdf:Description rdf:about="http://gensc.org/ns/mixs/url-2011-01-26"> <rdfs:label xml:lang="en-US">relevant | |
electronic resources</rdfs:label> <rdfs:isDefinedBy | |
rdf:resource="http://gensc.org/ns/mixs/"/> <dcterms:issued>2011-1-26</dcterms:issued> | |
<dcterms:modified>2011-1-26</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://gensc.org/ns/mixs/history/#url-2011-01-26"/> | |
<dwcattributes:status>deprecated</dwcattributes:status> <dwcattributes:organizedInClass | |
rdf:resource="Occurrence"/> </rdf:Description> | |
<rdf:Description rdf:about="http://rs.tdwg.org/dwc/terms/verbatimCoordinates-2009-04-24"> <rdfs:label | |
xml:lang="en-US">Verbatim Coordinates</rdfs:label> <rdfs:comment xml:lang="en-US">The verbatim original | |
spatial coordinates of the Location. The coordinate ellipsoid, geodeticDatum, or full Spatial Reference System | |
(SRS) for these coordinates should be stored in verbatimSRS and the coordinate system should be stored in | |
verbatimCoordinateSystem.</rdfs:comment> <dcterms:description xml:lang="en-US">Examples: "41 05 54S 121 | |
05 34W", "17T 630000 4833400"</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://rs.tdwg.org/dwc/terms/"/> <dcterms:issued>2008-11-19</dcterms:issued> | |
<dcterms:modified>2009-07-06</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://rs.tdwg.org/dwc/terms/history/#verbatimCoordinates-2009-04-24"/> | |
<dcterms:replaces rdf:resource="http://gensc.org/ns/mixs/lat_lon-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> | |
<dwcattributes:abcdEquivalence>{DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/Coordin | |
atesLatLon/CoordinatesText or | |
DataSets/DataSet/Units/Unit/Gathering/SiteCoordinateSets/SiteCoordinates/CoordinatesUTM/UTMText}</dwcattributes: | |
abcdEquivalence> <dwcattributes:organizedInClass rdf:resource="http://purl.org/dc/terms/Location"/> | |
</rdf:Description> | |
<rdf:Description rdf:about="http://rs.tdwg.org/dwc/terms/verbatimDepth-2009-04-24"> <rdfs:label | |
xml:lang="en-US">Verbatim Depth</rdfs:label> <rdfs:comment xml:lang="en-US">The original description of the | |
depth below the local surface.</rdfs:comment> <dcterms:description xml:lang="en-US">Example: "100-200 | |
m"</dcterms:description> <rdfs:isDefinedBy rdf:resource="http://rs.tdwg.org/dwc/terms/"/> | |
<dcterms:issued>2008-11-19</dcterms:issued> <dcterms:modified>2009-04-24</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://rs.tdwg.org/dwc/terms/history/#verbatimDepth-2009-04-24"/> | |
<dcterms:replaces rdf:resource="http://gensc.org/ns/mixs/depth-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> | |
<dwcattributes:abcdEquivalence>DataSets/DataSet/Units/Unit/Gathering/Depth/MeasurementOrFactText</dwcattributes: | |
abcdEquivalence> <dwcattributes:organizedInClass rdf:resource="http://purl.org/dc/terms/Location"/> | |
</rdf:Description> | |
<rdf:Description rdf:about="http://rs.tdwg.org/dwc/terms/verbatimElevation-2009-04-24"> <rdfs:label | |
xml:lang="en-US">Verbatim Elevation</rdfs:label> <rdfs:comment xml:lang="en-US">The original description | |
of the elevation (altitude, usually above sea level) of the Location.</rdfs:comment> <dcterms:description | |
xml:lang="en-US">Example: "100-200 m"</dcterms:description> <rdfs:isDefinedBy | |
rdf:resource="http://rs.tdwg.org/dwc/terms/"/> <dcterms:issued>2008-11-19</dcterms:issued> | |
<dcterms:modified>2009-04-24</dcterms:modified> <rdf:type | |
rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#Property"/> <dcterms:hasVersion | |
rdf:resource="http://rs.tdwg.org/dwc/terms/history/#verbatimElevation-2009-04-24"/> | |
<dcterms:replaces rdf:resource="http://gensc.org/ns/mixs/alt_elev-2011-01-26"/> | |
<dwcattributes:status>recommended</dwcattributes:status> | |
<dwcattributes:abcdEquivalence>DataSets/DataSet/Units/Unit/Gathering/Altitude/MeasurementOrFactText</dwcattribut | |
es:abcdEquivalence> <dwcattributes:organizedInClass rdf:resource="http://purl.org/dc/terms/Location"/> | |
</rdf:Description> | |
<!-- end Current Terms --> | |
</rdf:RDF> |
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