verdurin/Boost-1.63.0-foss-2016b-Python-2.7.12_partial.log

## Boost-1.63.0-foss-2016b-Python-2.7.12_partial.log
== 2018-03-15 15:40:33,611 easyblock.py:264 INFO This is EasyBuild 3.5.3 (framework: 3.5.3, easyblocks: 3.5.3) on host easybuild.novalocal.
== 2018-03-15 15:40:33,612 easyblock.py:270 INFO This is easyblock EB_Boost from module easybuild.easyblocks.boost (/home/centos/.local/easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/easybuild_easyblocks-3.5.3-py2.7.egg/easybuild/easyblocks/b/boost.py)
== 2018-03-15 15:40:33,612 easyblock.py:815 INFO Build dir set to /home/centos/.local/easybuild/build/Boost/1.63.0/foss-2016b-Python-2.7.12
== 2018-03-15 15:40:33,612 config.py:460 DEBUG software install path as specified by 'installpath' and 'subdir_software': /home/centos/.local/easybuild/software
== 2018-03-15 15:40:33,613 easyconfig.py:1688 DEBUG Determining software installation subdir for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x245b0d0>
== 2018-03-15 15:40:33,613 easyconfig.py:1694 DEBUG Obtained subdir Boost/1.63.0-foss-2016b-Python-2.7.12
== 2018-03-15 15:40:33,613 easyblock.py:856 INFO Software install dir set to /home/centos/.local/easybuild/software/Boost/1.63.0-foss-2016b-Python-2.7.12
== 2018-03-15 15:40:33,613 config.py:460 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /home/centos/.local/easybuild/modules
== 2018-03-15 15:40:33,614 easyblock.py:861 INFO Module install dir set to /home/centos/.local/easybuild/modules/all
== 2018-03-15 15:40:33,614 easyblock.py:249 INFO Init completed for application name Boost version 1.63.0
== 2018-03-15 15:40:33,614 easyblock.py:2662 INFO Obtained application instance of for Boost (easyblock: None)
== 2018-03-15 15:40:33,614 easyblock.py:2675 DEBUG Skip set to False
== 2018-03-15 15:40:33,615 build_log.py:233 INFO building and installing Boost/1.63.0-foss-2016b-Python-2.7.12...
== 2018-03-15 15:40:33,615 easyblock.py:2441 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False
== 2018-03-15 15:40:33,615 build_log.py:233 INFO fetching files...
== 2018-03-15 15:40:33,615 easyblock.py:2449 INFO Starting fetch step
== 2018-03-15 15:40:33,616 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x245b0d0>
== 2018-03-15 15:40:33,616 templates.py:175 DEBUG version found in easyconfig is 1.63.0
== 2018-03-15 15:40:33,616 templates.py:219 DEBUG name: github_account, config: None
== 2018-03-15 15:40:33,616 templates.py:219 DEBUG name: name, config: Boost
== 2018-03-15 15:40:33,617 templates.py:219 DEBUG name: version, config: 1.63.0
== 2018-03-15 15:40:33,617 templates.py:219 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2018-03-15 15:40:33,617 templates.py:219 DEBUG name: versionprefix, config:
== 2018-03-15 15:40:33,617 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x245b0d0>
== 2018-03-15 15:40:33,617 templates.py:175 DEBUG version found in easyconfig is 1.63.0
== 2018-03-15 15:40:33,618 templates.py:219 DEBUG name: github_account, config: None
== 2018-03-15 15:40:33,618 templates.py:219 DEBUG name: name, config: Boost
== 2018-03-15 15:40:33,618 templates.py:219 DEBUG name: version, config: 1.63.0
== 2018-03-15 15:40:33,618 templates.py:219 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2018-03-15 15:40:33,619 templates.py:219 DEBUG name: versionprefix, config:
== 2018-03-15 15:40:33,619 easyblock.py:2455 INFO Running method fetch_step part of step fetch
== 2018-03-15 15:40:33,619 easyblock.py:1557 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
== 2018-03-15 15:40:33,619 filetools.py:343 INFO Command eb found at /home/centos/.local/easybuild/software/EasyBuild/3.5.3/bin/eb
== 2018-03-15 15:40:33,620 tools.py:263 DEBUG Also considering installation prefix /home/centos/.local/easybuild/software/EasyBuild/3.5.3...
== 2018-03-15 15:40:33,620 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /home/centos/src/github/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs
== 2018-03-15 15:40:33,620 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /home/centos/.local/easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/easybuild_easyconfigs-3.5.3-py2.7.egg/easybuild/easyconfigs/easybuild/easyconfigs
== 2018-03-15 15:40:33,621 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-_vaUfq/files_pr5930/easybuild/easyconfigs
== 2018-03-15 15:40:33,621 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/git/ext/gitdb/easybuild/easyconfigs
== 2018-03-15 15:40:33,621 tools.py:268 DEBUG Checking for easybuild/easyconfigs at easybuild/easyconfigs
== 2018-03-15 15:40:33,621 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /home/centos/.local/easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/vsc_install-0.10.29-py2.7.egg/easybuild/easyconfigs
== 2018-03-15 15:40:33,621 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /home/centos/.local/easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/vsc_base-2.5.8-py2.7.egg/easybuild/easyconfigs
== 2018-03-15 15:40:33,622 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /home/centos/.local/easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/easybuild_framework-3.5.3-py2.7.egg/easybuild/easyconfigs
== 2018-03-15 15:40:33,622 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /home/centos/.local/easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/easybuild_easyblocks-3.5.3-py2.7.egg/easybuild/easyconfigs
== 2018-03-15 15:40:33,622 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /home/centos/.local/easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/easybuild_easyconfigs-3.5.3-py2.7.egg/easybuild/easyconfigs
== 2018-03-15 15:40:33,622 tools.py:272 DEBUG Added /home/centos/.local/easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/easybuild_easyconfigs-3.5.3-py2.7.egg/easybuild/easyconfigs to list of paths for easybuild/easyconfigs
== 2018-03-15 15:40:33,623 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /home/centos/.local/easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/easybuild/easyconfigs
== 2018-03-15 15:40:33,623 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python27.zip/easybuild/easyconfigs
== 2018-03-15 15:40:33,623 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/easybuild/easyconfigs
== 2018-03-15 15:40:33,623 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/plat-linux2/easybuild/easyconfigs
== 2018-03-15 15:40:33,624 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-tk/easybuild/easyconfigs
== 2018-03-15 15:40:33,624 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-old/easybuild/easyconfigs
== 2018-03-15 15:40:33,624 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/lib-dynload/easybuild/easyconfigs
== 2018-03-15 15:40:33,624 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/easybuild/easyconfigs
== 2018-03-15 15:40:33,624 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python2.7/site-packages/easybuild/easyconfigs
== 2018-03-15 15:40:33,625 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python2.7/site-packages/gitdb/ext/smmap/easybuild/easyconfigs
== 2018-03-15 15:40:33,625 tools.py:268 DEBUG Checking for easybuild/easyconfigs at /home/centos/.local/easybuild/software/EasyBuild/3.5.3/easybuild/easyconfigs
== 2018-03-15 15:40:33,626 filetools.py:1107 INFO Creating directory /home/centos/.local/easybuild/sources/b/Boost (parents: True, set_gid: False, sticky: False)
== 2018-03-15 15:40:33,626 easyblock.py:714 DEBUG Trying to download file boost_1_63_0.tar.gz from https://sourceforge.net/projects/boost/files/boost/1.63.0/boost_1_63_0.tar.gz to /home/centos/.local/easybuild/sources/b/Boost/boost_1_63_0.tar.gz ...
== 2018-03-15 15:40:33,626 filetools.py:443 DEBUG Trying to download boost_1_63_0.tar.gz from https://sourceforge.net/projects/boost/files/boost/1.63.0/boost_1_63_0.tar.gz to /home/centos/.local/easybuild/sources/b/Boost/boost_1_63_0.tar.gz
== 2018-03-15 15:40:33,627 filetools.py:450 DEBUG Using timeout of 10 seconds for initiating download
== 2018-03-15 15:40:33,627 filetools.py:1135 DEBUG Not creating existing path /home/centos/.local/easybuild/sources/b/Boost
== 2018-03-15 15:40:36,014 filetools.py:468 DEBUG response code for given url https://sourceforge.net/projects/boost/files/boost/1.63.0/boost_1_63_0.tar.gz: 200
== 2018-03-15 15:40:39,397 filetools.py:1135 DEBUG Not creating existing path /home/centos/.local/easybuild/sources/b/Boost
== 2018-03-15 15:40:39,457 filetools.py:470 INFO Downloaded file boost_1_63_0.tar.gz from url https://sourceforge.net/projects/boost/files/boost/1.63.0/boost_1_63_0.tar.gz to /home/centos/.local/easybuild/sources/b/Boost/boost_1_63_0.tar.gz
== 2018-03-15 15:40:39,457 filetools.py:490 INFO Successful download of file boost_1_63_0.tar.gz from url https://sourceforge.net/projects/boost/files/boost/1.63.0/boost_1_63_0.tar.gz to path /home/centos/.local/easybuild/sources/b/Boost/boost_1_63_0.tar.gz
== 2018-03-15 15:40:39,457 easyblock.py:727 INFO Successfully downloaded source file boost_1_63_0.tar.gz from https://sourceforge.net/projects/boost/files/boost/1.63.0/boost_1_63_0.tar.gz
== 2018-03-15 15:40:39,457 easyblock.py:362 DEBUG File /home/centos/.local/easybuild/sources/b/Boost/boost_1_63_0.tar.gz found for source boost_1_63_0.tar.gz
== 2018-03-15 15:40:39,458 easyblock.py:374 INFO Added sources: [{'path': '/home/centos/.local/easybuild/sources/b/Boost/boost_1_63_0.tar.gz', 'cmd': None, 'finalpath': '/home/centos/.local/easybuild/build/Boost/1.63.0/foss-2016b-Python-2.7.12', 'name': 'boost_1_63_0.tar.gz', 'checksum': None}]
== 2018-03-15 15:40:39,458 easyblock.py:1598 INFO no patches provided
== 2018-03-15 15:40:39,458 filetools.py:652 DEBUG Using blocksize 16777216 for calculating the checksum
== 2018-03-15 15:40:39,693 easyblock.py:1608 INFO md5 checksum for /home/centos/.local/easybuild/sources/b/Boost/boost_1_63_0.tar.gz: 7b493c08bc9557bbde7e29091f28b605
== 2018-03-15 15:40:39,693 filetools.py:652 DEBUG Using blocksize 16777216 for calculating the checksum
== 2018-03-15 15:40:40,121 easyblock.py:1608 INFO sha256 checksum for /home/centos/.local/easybuild/sources/b/Boost/boost_1_63_0.tar.gz: fe34a4e119798e10b8cc9e565b3b0284e9fd3977ec8a1b19586ad1dec397088b
== 2018-03-15 15:40:40,122 easyconfig.py:1676 DEBUG Determining full module name for <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x245b0d0> (force_visible: False)
== 2018-03-15 15:40:40,122 easyconfig.py:1656 DEBUG No alternative software name specified to determine module name with
== 2018-03-15 15:40:40,122 utilities.py:103 DEBUG Module name Boost/1.63.0-foss-2016b-Python-2.7.12 validated
== 2018-03-15 15:40:40,122 easyconfig.py:1683 DEBUG Obtained valid full module name Boost/1.63.0-foss-2016b-Python-2.7.12
== 2018-03-15 15:40:40,123 config.py:460 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /home/centos/.local/easybuild/modules
== 2018-03-15 15:40:40,123 easyblock.py:1641 INFO Checking dirs that need to be created: ['/home/centos/.local/easybuild/software/Boost/1.63.0-foss-2016b-Python-2.7.12', '/home/centos/.local/easybuild/modules/all/Boost', '/home/centos/.local/easybuild/modules/devel/Boost']
== 2018-03-15 15:40:40,123 filetools.py:1107 INFO Creating directory /home/centos/.local/easybuild/software/Boost/1.63.0-foss-2016b-Python-2.7.12 (parents: True, set_gid: False, sticky: False)
== 2018-03-15 15:40:40,124 filetools.py:1107 INFO Creating directory /home/centos/.local/easybuild/modules/all/Boost (parents: True, set_gid: False, sticky: False)
== 2018-03-15 15:40:40,124 filetools.py:1107 INFO Creating directory /home/centos/.local/easybuild/modules/devel/Boost (parents: True, set_gid: False, sticky: False)
== 2018-03-15 15:40:40,124 easyblock.py:2441 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False
== 2018-03-15 15:40:40,125 build_log.py:233 INFO creating build dir, resetting environment...
== 2018-03-15 15:40:40,125 easyblock.py:2449 INFO Starting ready step
== 2018-03-15 15:40:40,125 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x245b0d0>
== 2018-03-15 15:40:40,125 templates.py:175 DEBUG version found in easyconfig is 1.63.0
== 2018-03-15 15:40:40,126 templates.py:219 DEBUG name: github_account, config: None
== 2018-03-15 15:40:40,126 templates.py:219 DEBUG name: name, config: Boost
== 2018-03-15 15:40:40,126 templates.py:219 DEBUG name: version, config: 1.63.0
== 2018-03-15 15:40:40,126 templates.py:219 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2018-03-15 15:40:40,126 templates.py:219 DEBUG name: versionprefix, config:
== 2018-03-15 15:40:40,127 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x245b0d0>
== 2018-03-15 15:40:40,127 templates.py:175 DEBUG version found in easyconfig is 1.63.0
== 2018-03-15 15:40:40,127 templates.py:219 DEBUG name: github_account, config: None
== 2018-03-15 15:40:40,127 templates.py:219 DEBUG name: name, config: Boost
== 2018-03-15 15:40:40,127 templates.py:219 DEBUG name: version, config: 1.63.0
== 2018-03-15 15:40:40,128 templates.py:219 DEBUG name: versionsuffix, config: -Python-%(pyver)s
== 2018-03-15 15:40:40,128 templates.py:219 DEBUG name: versionprefix, config:
== 2018-03-15 15:40:40,128 easyblock.py:2455 INFO Running method check_readiness_step part of step ready
== 2018-03-15 15:40:40,128 easyblock.py:1502 DEBUG Desired parallelism specified via 'parallel' build option: None
== 2018-03-15 15:40:40,129 affinity.py:211 DEBUG sched_getaffinity for pid 24073 returned cpuset 0-7
== 2018-03-15 15:40:40,130 run.py:83 DEBUG Using cached value for command 'ulimit -u': ('4096\n', 0)
== 2018-03-15 15:40:40,130 easyblock.py:1505 INFO Setting parallelism: 8
== 2018-03-15 15:40:40,130 modules.py:653 DEBUG Current MODULEPATH: /home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
== 2018-03-15 15:40:40,131 modules.py:660 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2018-03-15 15:40:40,131 modules.py:660 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2018-03-15 15:40:40,131 modules.py:664 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python --terse list' from /home/centos/src/github/easybuild-easyconfigs/easybuild/easyconfigs
== 2018-03-15 15:40:40,186 modules.py:670 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python --terse list': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4Oi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZTovdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIixbInZlcnNpb24iXT0yLH0=";
os.environ["_ModuleTable_Sz_"] = "3";
; stderr: EasyBuild/3.5.3

== 2018-03-15 15:40:40,186 modules.py:1129 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python --terse list' ran fine
== 2018-03-15 15:40:40,187 modules.py:707 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to []
== 2018-03-15 15:40:40,187 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to  (previous value: '')
== 2018-03-15 15:40:40,188 modules.py:707 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2018-03-15 15:40:40,188 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2018-03-15 15:40:40,188 easyblock.py:1510 WARNING Loaded modules detected: ['EasyBuild/3.5.3']
== 2018-03-15 15:40:40,189 easyconfig.py:608 DEBUG Dependencies BEFORE filtering: [{'external_module_metadata': {}, 'full_mod_name': 'bzip2/1.0.6-foss-2016b', 'toolchain': {'version': '2016b', 'name': 'foss'}, 'name': 'bzip2', 'dummy': False, 'short_mod_name': 'bzip2/1.0.6-foss-2016b', 'external_module': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'zlib/1.2.8-foss-2016b', 'toolchain': {'version': '2016b', 'name': 'foss'}, 'name': 'zlib', 'dummy': False, 'short_mod_name': 'zlib/1.2.8-foss-2016b', 'external_module': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Python/2.7.12-foss-2016b', 'toolchain': {'version': '2016b', 'name': 'foss'}, 'name': 'Python', 'dummy': False, 'short_mod_name': 'Python/2.7.12-foss-2016b', 'external_module': False, 'versionsuffix': '', 'version': '2.7.12', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}]
== 2018-03-15 15:40:40,189 toolchain.py:376 DEBUG add_dependencies: adding toolchain dependencies [{'external_module_metadata': {}, 'full_mod_name': 'bzip2/1.0.6-foss-2016b', 'toolchain': {'version': '2016b', 'name': 'foss'}, 'name': 'bzip2', 'dummy': False, 'short_mod_name': 'bzip2/1.0.6-foss-2016b', 'external_module': False, 'versionsuffix': '', 'version': '1.0.6', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'zlib/1.2.8-foss-2016b', 'toolchain': {'version': '2016b', 'name': 'foss'}, 'name': 'zlib', 'dummy': False, 'short_mod_name': 'zlib/1.2.8-foss-2016b', 'external_module': False, 'versionsuffix': '', 'version': '1.2.8', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Python/2.7.12-foss-2016b', 'toolchain': {'version': '2016b', 'name': 'foss'}, 'name': 'Python', 'dummy': False, 'short_mod_name': 'Python/2.7.12-foss-2016b', 'external_module': False, 'versionsuffix': '', 'version': '2.7.12', 'toolchain_inherited': True, 'hidden': False, 'build_only': False}]
== 2018-03-15 15:40:40,189 toolchain.py:386 DEBUG add_dependencies: MODULEPATH: /home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
== 2018-03-15 15:40:40,190 modules.py:434 DEBUG Found cached result for 'module avail' with key '('MODULEPATH=/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core', 'lmod', '--show-hidden')': ['Autoconf/2.69', 'Autoconf/2.69-GCC-4.8.4', 'Autoconf/2.69-GCC-4.9.3-2.25', 'Autoconf/2.69-GCC-5.4.0-2.26', 'Autoconf/2.69-GCCcore-6.3.0', 'Autoconf/2.69-GCCcore-6.4.0', 'Autoconf/2.69-foss-2016b', 'Automake/1.15', 'Automake/1.15-GCC-4.8.4', 'Automake/1.15-GCC-4.9.3-2.25', 'Automake/1.15-GCC-5.4.0-2.26', 'Automake/1.15-GCCcore-6.3.0', 'Automake/1.15-foss-2016b', 'Automake/1.15.1-GCCcore-6.4.0', 'Autotools/20150215', 'Autotools/20150215-GCC-4.9.3-2.25', 'Autotools/20150215-GCC-5.4.0-2.26', 'Autotools/20150215-GCCcore-6.3.0', 'Autotools/20150215-foss-2016b', 'Autotools/20170619-GCCcore-6.4.0', 'BEDTools/2.27.1-foss-2016b', 'Bazel/0.11.0-GCCcore-6.4.0', 'Bison/3.0.4', 'Bison/3.0.4-GCCcore-4.9.3', 'Bison/3.0.4-GCCcore-5.4.0', 'Bison/3.0.4-GCCcore-6.3.0', 'Bison/3.0.4-GCCcore-6.4.0', 'CMake/3.10.2-GCCcore-6.4.0', 'CMake/3.9.1-GCCcore-6.4.0', 'CMake/3.9.5-GCCcore-6.4.0', 'Doxygen/1.8.13-GCCcore-6.4.0', 'EasyBuild/3.5.1', 'EasyBuild/3.5.2', 'EasyBuild/3.5.3', 'FFTW/3.3.4-gompi-1.7.20', 'FFTW/3.3.4-gompi-2016b', 'FFTW/3.3.6-gompi-2017a', 'FFTW/3.3.6-gompi-2017b', 'FFTW/3.3.7-gompi-2018a', 'GCC/4.8.4', 'GCC/4.9.3-2.25', 'GCC/5.4.0-2.26', 'GCC/6.3.0-2.27', 'GCC/6.4.0-2.28', 'GCCcore/4.9.3', 'GCCcore/5.4.0', 'GCCcore/6.3.0', 'GCCcore/6.4.0', 'GDAL/2.2.3-foss-2018a-Python-3.6.4', 'GEOS/3.6.2-foss-2018a-Python-3.6.4', 'GLib/2.54.3-GCCcore-6.4.0', 'GMP/6.1.1-foss-2016b', 'GMP/6.1.2-GCCcore-6.4.0', 'Ghostscript/9.22-GCCcore-6.4.0-cairo-1.14.12', 'GraphicsMagick/1.3.28-foss-2018a', 'HDF5/1.10.1-foss-2018a', 'JasPer/2.0.14-GCCcore-6.4.0', 'Java/1.8.0_162', 'LLVM/5.0.1-GCCcore-6.4.0', 'LibTIFF/4.0.9-GCCcore-6.4.0', 'M4/1.4.17', 'M4/1.4.17-GCC-4.8.4', 'M4/1.4.17-GCC-4.9.3-2.25', 'M4/1.4.17-GCC-5.4.0-2.26', 'M4/1.4.17-GCCcore-4.9.3', 'M4/1.4.17-GCCcore-5.4.0', 'M4/1.4.17-foss-2016b', 'M4/1.4.18', 'M4/1.4.18-GCCcore-6.3.0', 'M4/1.4.18-GCCcore-6.4.0', 'Mako/1.0.7-foss-2018a-Python-2.7.14', 'Mesa/17.3.6-foss-2018a', 'NASM/2.12.02-foss-2016b', 'NASM/2.13.01-GCCcore-6.4.0', 'NASM/2.13.03-GCCcore-6.4.0', 'OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0', 'OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0', 'OpenBLAS/0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.1', 'OpenBLAS/0.2.19-GCC-6.3.0-2.27-LAPACK-3.7.0', 'OpenBLAS/0.2.20-GCC-6.4.0-2.28', 'OpenMPI/1.10.3-GCC-5.4.0-2.26', 'OpenMPI/1.8.4-GCC-4.8.4', 'OpenMPI/2.0.2-GCC-6.3.0-2.27', 'OpenMPI/2.1.1-GCC-6.4.0-2.28', 'OpenMPI/2.1.2-GCC-6.4.0-2.28', 'PCRE/8.39-foss-2016b', 'PCRE/8.41-GCCcore-6.4.0', 'PROJ/5.0.0-foss-2018a', 'Perl/5.26.1-GCCcore-6.4.0', 'Python/2.7.14-GCCcore-6.4.0-bare', 'Python/2.7.14-foss-2018a', 'Python/3.6.4-foss-2018a', 'Qt5/5.10.1-foss-2018a', 'SAMtools/0.1.19-foss-2016b', 'SQLite/3.13.0-foss-2016b', 'SQLite/3.20.1-GCCcore-6.4.0', 'SQLite/3.21.0-GCCcore-6.4.0', 'SWIG/3.0.12-foss-2018a-Python-3.6.4', 'ScaLAPACK/2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0', 'ScaLAPACK/2.0.2-gompi-2016b-OpenBLAS-0.2.18-LAPACK-3.6.1', 'ScaLAPACK/2.0.2-gompi-2017a-OpenBLAS-0.2.19-LAPACK-3.7.0', 'ScaLAPACK/2.0.2-gompi-2017b-OpenBLAS-0.2.20', 'ScaLAPACK/2.0.2-gompi-2018a-OpenBLAS-0.2.20', 'Szip/2.1.1-GCCcore-6.4.0', 'Tcl/8.6.5-foss-2016b', 'Tcl/8.6.7-GCCcore-6.4.0', 'Tcl/8.6.8-GCCcore-6.4.0', 'TensorFlow/1.6.0-foss-2018a-Python-3.6.4', 'X11/20180131-GCCcore-6.4.0', 'XML-Parser/2.44_01-GCCcore-6.4.0-Perl-5.26.1', 'XZ/5.2.3-GCCcore-6.4.0', 'binutils/2.25', 'binutils/2.25-GCCcore-4.9.3', 'binutils/2.26', 'binutils/2.26-GCCcore-5.4.0', 'binutils/2.27', 'binutils/2.27-GCCcore-6.3.0', 'binutils/2.28', 'binutils/2.28-GCCcore-6.4.0', 'bzip2/1.0.6-GCCcore-6.3.0', 'bzip2/1.0.6-GCCcore-6.4.0', 'bzip2/1.0.6-foss-2016b', 'cURL/7.58.0-GCCcore-6.4.0', 'cairo/1.14.12-GCCcore-6.4.0', 'expat/2.2.5-GCCcore-6.4.0', 'flex/2.5.39', 'flex/2.5.39-GCCcore-4.9.3', 'flex/2.6.0', 'flex/2.6.0-GCCcore-5.4.0', 'flex/2.6.3', 'flex/2.6.3-GCCcore-6.3.0', 'flex/2.6.4-GCCcore-6.4.0', 'fontconfig/2.12.6-GCCcore-6.4.0', 'foss/2016b', 'foss/2017a', 'foss/2017b', 'foss/2018a', 'freetype/2.9-GCCcore-6.4.0', 'gettext/0.19.8.1', 'gettext/0.19.8.1-GCCcore-6.4.0', 'gettext/0.19.8.1-GCCcore-6.4.0-libxml2-2.9.7', 'gompi/1.7.20', 'gompi/2016b', 'gompi/2017a', 'gompi/2017b', 'gompi/2018a', 'goolf/1.7.20', 'gperf/3.1-GCCcore-6.4.0', 'help2man/1.47.4', 'help2man/1.47.4-GCCcore-6.3.0', 'help2man/1.47.4-GCCcore-6.4.0', 'hwloc/1.10.1-GCC-4.8.4', 'hwloc/1.11.2-GCC-4.9.3-2.25', 'hwloc/1.11.3-GCC-5.4.0-2.26', 'hwloc/1.11.5-GCC-6.3.0-2.27', 'hwloc/1.11.7-GCCcore-6.4.0', 'hwloc/1.11.8-GCCcore-6.4.0', 'intltool/0.51.0-GCCcore-6.4.0-Perl-5.26.1', 'libGLU/9.0.0-foss-2018a', 'libdrm/2.4.91-GCCcore-6.4.0', 'libffi/3.2.1-GCCcore-6.4.0', 'libffi/3.2.1-foss-2016b', 'libjpeg-turbo/1.5.0-foss-2016b', 'libjpeg-turbo/1.5.2-GCCcore-6.4.0', 'libjpeg-turbo/1.5.3-GCCcore-6.4.0', 'libpng/1.6.26-foss-2016b', 'libpng/1.6.34-GCCcore-6.4.0', 'libreadline/6.3-foss-2016b', 'libreadline/7.0-GCCcore-6.4.0', 'libtool/2.4.5-GCC-4.8.4', 'libtool/2.4.6', 'libtool/2.4.6-GCC-4.9.3-2.25', 'libtool/2.4.6-GCC-5.4.0-2.26', 'libtool/2.4.6-GCCcore-6.3.0', 'libtool/2.4.6-GCCcore-6.4.0', 'libtool/2.4.6-foss-2016b', 'libxml2/2.9.4-GCCcore-6.4.0', 'libxml2/2.9.7-GCCcore-6.4.0', 'lmod/6.5.1', 'ncurses/6.0', 'ncurses/6.0-GCCcore-6.4.0', 'ncurses/6.0-foss-2016b', 'netCDF/4.6.0-foss-2018a', 'nettle/3.4-foss-2018a', 'numactl/2.0.10-GCC-4.8.4', 'numactl/2.0.11-GCC-4.9.3-2.25', 'numactl/2.0.11-GCC-5.4.0-2.26', 'numactl/2.0.11-GCC-6.3.0-2.27', 'numactl/2.0.11-GCCcore-6.4.0', 'pixman/0.34.0-GCCcore-6.4.0', 'pkg-config/0.29.2-GCCcore-6.4.0', 'settarg/6.5.1', 'util-linux/2.31.1-GCCcore-6.4.0', 'wheel/0.30.0-foss-2018a-Python-3.6.4', 'zlib/1.2.11', 'zlib/1.2.11-GCCcore-6.3.0', 'zlib/1.2.11-GCCcore-6.4.0', 'zlib/1.2.8', 'zlib/1.2.8-GCCcore-4.9.3', 'zlib/1.2.8-GCCcore-5.4.0', 'zlib/1.2.8-foss-2016b']
== 2018-03-15 15:40:40,190 modules.py:653 DEBUG Current MODULEPATH: /home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
== 2018-03-15 15:40:40,191 modules.py:660 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2018-03-15 15:40:40,191 modules.py:660 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2018-03-15 15:40:40,191 modules.py:664 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python show Python/2.7.12-foss-2016b' from /home/centos/src/github/easybuild-easyconfigs/easybuild/easyconfigs
== 2018-03-15 15:40:40,279 modules.py:670 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python show Python/2.7.12-foss-2016b': stdout: os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4Oi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZTovdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIixbInZlcnNpb24iXT0yLH0=";
os.environ["_ModuleTable_Sz_"] = "3";
; stderr: Failed to find the following module(s):  "Python/2.7.12-foss-2016b" in your MODULEPATH
Try:
    "module spider Python/2.7.12-foss-2016b"

to see if the module(s) are available across all compilers and MPI implementations.

== 2018-03-15 15:40:40,279 modules.py:1129 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python show Python/2.7.12-foss-2016b' ran fine
== 2018-03-15 15:40:40,280 modules.py:558 DEBUG Cached result for 'module show Python/2.7.12-foss-2016b' with key '('MODULEPATH=/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core', 'lmod', 'Python/2.7.12-foss-2016b')': os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["LMOD_DEFAULT_MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["MODULEPATH"] = "/home/centos/.local/easybuild/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core";
os.environ["_ModuleTable001_"] = "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";
os.environ["_ModuleTable002_"] = "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";
os.environ["_ModuleTable003_"] = "bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0xpbnV4Oi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZTovdXNyL3NoYXJlL2xtb2QvbG1vZC9tb2R1bGVmaWxlcy9Db3JlIixbInZlcnNpb24iXT0yLH0=";
os.environ["_ModuleTable_Sz_"] = "3";
Failed to find the following module(s):  "Python/2.7.12-foss-2016b" in your MODULEPATH
Try:
    "module spider Python/2.7.12-foss-2016b"

to see if the module(s) are available across all compilers and MPI implementations.

== 2018-03-15 15:40:40,282 build_log.py:158 ERROR EasyBuild crashed with an error (at easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/vsc_base-2.5.8-py2.7.egg/vsc/utils/exceptions.py:124 in __init__): Missing modules for one or more dependencies: Python/2.7.12-foss-2016b (at easybuild/software/EasyBuild/3.5.3/lib/python2.7/site-packages/easybuild_framework-3.5.3-py2.7.egg/easybuild/tools/toolchain/toolchain.py:401 in add_dependencies)
== 2018-03-15 15:40:40,283 easyblock.py:2688 WARNING build failed (first 300 chars): Missing modules for one or more dependencies: Python/2.7.12-foss-2016b
== 2018-03-15 15:40:40,283 easyblock.py:279 INFO Closing log for application name Boost version 1.63.0