stitch bug

pachaboo_left.fastq

@HWI-ST330:173:D0M78ACXX:5:1101:1568:1967 1:N:0:GAGTGG
NCCGCGAGCCCTCTGCCTTTGGTTCTACATGCTTAGCCGTTTCTTTAGTTTAACCGCCTGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGG
+
#1:BDD@DHHHDFHIIHIGHGIGIIHDG*BGGGI@EGFF?FHDHII.B@FH=FHIGFHFF;?7@CCD;,9?AA@A,9=ABCB4:@CCC4>>C:@@8>8<B
@HWI-ST330:173:D0M78ACXX:5:1101:2373:1968 1:N:0:GAGTGG
NACTGCTCGTAAGTCTACTGGAGGAAAAGCTCCCCGTAAACAACTGGCAACTAAGGCAGCAAGGAAGAGTGCTCCATCAACTGGTGGTGTCAAGAAGCCT
+
#1BDDFFFHHHHHGIJJJJJJJJJIJJJGGIJJJJIGHJJIIJIIJJJJJJJJJJIGJJHHHHFED@BD(;ACDD@CCCDDDDDCCD8??CCDDDDDCBD
@HWI-ST330:173:D0M78ACXX:5:1101:3245:1999 1:N:0:GAGTGG
NTCCGCGGTACGGCTGAGTTCGCTCGGTGCGTGCTGAGGAAAGTCCGGGCTCCCCCATGGCCAGGCCTGCTGGGGAACGCCCAGTGCGGGGGACCGTGAG
+
#1=BDDFD@DHHFIIIIIIIIIIIIII(BAG@FHIGCHIHHEF7@DDCDBBA@BDDD?CCB?A?@<@>BB@A@?&(0(95<B58(4><>B&5)5?9&88?
@HWI-ST330:173:D0M78ACXX:5:1101:3389:1966 1:N:0:GAGTGG
NAAGAACCCCGGGAGGGGAGTGAAACAGAACATGAAACCGTGAGCCTACAAGCAATGGGAGCCCGACTGATCGGGTGACTGTGTGCCTGTTGAAGAATGA
+
#4=DFFFFHHHHHHIJJJGIHIJIIIJIIJIJJIJJJJII@EEGFHFFFFFECEEEDDDDDBBBDDDDDDDDDDDB<<CDCCC>ACDDDCCCDCDDDDCD
@HWI-ST330:173:D0M78ACXX:5:1101:3420:1968 1:N:0:GAGTGG
NATTGATCCAATGGATTCCTTTTAAAGAAGCTCTGGTAGTTTTTAACAGTGATGGTCTTCATCCATTGGTGAAATCAGCCTATTTGGATTTTGTTACATC
+
#1=DDDFFHHHHHJJIJIJJJJJJIJJJJJJJJJJJFGHGIIJIIGIHIFIIJJJFHIIJIJJJIIJJJFHIJJJEGIJHFFFHHFFFFFFEEEEDDDED
@HWI-ST330:173:D0M78ACXX:5:1101:3491:1983 1:N:0:GAGTGG
NGGTTATTGAATATCAACCCAAATCGCTGCAAACTATGGTCGAAAAAAAATTACGTGAGTTACAGGTGAATGGTTTGAAAGTTTATGGTCTCACTGAAAG
+
#4=DDFFFHHHHHIJJJJJJJJJJJJJJJJJJIJJJIJJBGHIJJJJJIHHFHHFEFBBCEEEEDD@CDDDDDCDBBADDC@CC>CCCACDDECCCDDDD
@HWI-ST330:173:D0M78ACXX:5:1101:3974:1981 1:N:0:GAGTGG
NGTAAAATATCTGGATATTGCTATAATGAGGTTTATGGAAAAATTCACTTTTGATTAATGTTTATCGGTGTAAATTTAACTTTCTTCCCTCAACACTTTT
+
#1:BDFFFGHHFHJIJGIIIIIGIJJJIJJJFGIIJJIJJIJJJJJJJJJJJJJJJJJJIJJJJJJJIHGHGIJIHHIJHHHHHHFFFFFFEEECDDDDD
@HWI-ST330:173:D0M78ACXX:5:1101:4534:1968 1:N:0:GAGTGG
NCACCGTCTACGGCGGCCCTTCCCAGGGATCCTTCGGCTAGAAATGGAGTTTGTAACTCCTCGAGGCCAGATGAGGCGACCTCTGAAACGTCCTGTAACC
+
#1=DDFFFHHHHGJGI>HIIIIJJBHHIEFEICGGEHFDDDACE@;@;=5>ACA>A;>>A>A8;;B;??BB@AAAC<>-9@&:::>C@A<2<?044:>@>
@HWI-ST330:173:D0M78ACXX:5:1101:4554:1987 1:N:0:GAGTGG
NGACTAACCGCTGTAGGATGGTGTGTGCTACTACTGTCTTGTCTGACAGGTTGAGGAGGGGGGGTGGCACCTATCTCCATACTCTGTTGGCTGCTTGCTT
+
#4BDFFFFHHHHHHIJJIJJJHGHHGHIJJJJIJJIIIIJ>@BB@?FCDH9E>AHI@FHIHF&558>13:?>>@@>@C>@@CCC>>:@:?:3<<:A:8>A
@HWI-ST330:173:D0M78ACXX:5:1101:4665:1998 1:N:0:GAGTGG
NCTCACCCATGATTGCGGCCATCGGTATCGTCGGGTCGCCCAGGTCCATAGATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATATCGTATTC
+
#1:ADDDBFFFFDFF<@GFGFFFFF?C6B7BBEFI27';@AA;;..;?B;>A96('(5;@@5>@B###################################
@HWI-ST330:173:D0M78ACXX:5:1101:4804:1971 1:N:0:GAGTGG
NATCCCACCAAAAAAATTAGTATATAAAACCTTAGTAATCTTTAACTTAAAGCGCACATGCGCTGGTGCACACAGATCCTATCAACGTTTTATTCTCAAA
+
#1=DFFFFHHHHHJJJJJJJHIIJJJJJJJJJJIJHIJJJJJJJJJJJJJJJJJJJJIHHHHFFDDEDDDDDDDDDDDDDDDDDDDD<CDDDDDEEDEDC
@HWI-ST330:173:D0M78ACXX:5:1101:5019:1975 1:N:0:GAGTGG
NACGCATTTCACCGCTACACCGGAAATTCCCTCTGCCCCTGCCACACTCAAGCCTAGCAGTTTCCATTGCAGTGATGGAGTTGAGCTCCACGCTTTAACA
+
#1=DDDDDHFDAFBHIIHEDBGG@FFHI@DFEFG3??FDHAHGGEEGGE@@DGFHFFECDEEEE>>BDCC@@CCA>@35?CCC:>:ACAC9?9@BB34>:

pachaboo_right.fastq

@HWI-ST330:173:D0M78ACXX:5:1101:1568:1967 2:N:0:GAGTGG
CAGGCGGTTAAACTAAAGAAACGGCTAAGCATGTAGAACCAAAGGCAGAGGGCTCGCGGGAGATCGGAAGAGCGTCGTGTAGGGAAAGAGGGGAGATCTC
+
@@@FFFFFHFHFHIEHJIJIGIGHIJHHEG@DHHGG?FHID8BFHIAE;DCHHFFDDDDD0;&9>?B((52<AB0?########################
@HWI-ST330:173:D0M78ACXX:5:1101:2373:1968 2:N:0:GAGTGG
GCACTTTGGAACCTCAGATCAGTTTTAAAGTCTTGAGCAATTTCACGAACCAACCTTTGAAAAGGGAGTTTACGGATTAGAAGTTCAGTGGACTTTTGAT
+
CCCFFFFFHHHHHJJIJHJJJJHIIJJJIIFHIIIIJJJJIIIIIJJJGHHIIJJIJGIIHIJFIJIH;ACDFFFACDDDDDDACEEDCDDC@CDCDDBD
@HWI-ST330:173:D0M78ACXX:5:1101:3245:1999 2:N:0:GAGTGG
GCCGGGTTCTGTTCCTGGGGAGGTCTCCATGGAATGGCCCCCTCTCCAGGGGCGACCATCTCTCTAGGACCTGTGTTACCACAGGCCTCAAGCGGCATGT
+
@CCFFF@DDHDFHIJEIJGGFGIAHIJIHCHJJJGGGBECGG@;FGHGIIIIBCBDDBCDCCCDDCCCACB9?AC:?CCCDD@BBBBCAC:(:<9555A:
@HWI-ST330:173:D0M78ACXX:5:1101:3389:1966 2:N:0:GAGTGG
GCCCTATTCAGACTCGCTTTCGCTGTGGCTCCGAGATTGCCCTCTTAACCTGCCAGTGCCTATAAGTCGCCGGCTCATTCTTCAACAGGCACACAGTCAC
+
CCCFFFFFHHHHHJJJJJJJJJJJJGIJJJJJG>GGIIDFIIEHEGFHIIGHIIIIHIJHGHHGHFFFFCBBDDDBCCDDDECAACC?BBDDDDDD>CAA
@HWI-ST330:173:D0M78ACXX:5:1101:3420:1968 2:N:0:GAGTGG
GCATGATCAAGACCAGTTACTAAGTTCTTTGTCACATTAGCTGCTGCTAATGGATTAGGAGATAACTTCTCCCATAGAAAACATCGCCACAAATTATCAA
+
CCCFFFFFHHHHHJJJJJIJIJJJJJJJJJJIJDGIIJJJJJJIJJJIIIGHIIIJEIJIJIJJJJJJJJJJJIJJIIIIHHGFFFFFDDBBDDDDDDDD
@HWI-ST330:173:D0M78ACXX:5:1101:3491:1983 2:N:0:GAGTGG
AGCTGGTCCACCATGCTTCAGATTCTTTTTTATAAATTGTTTGAATCTTGCTCTGTCATTGTTGACTATTTTGTAACTTATTTCATATTCTTTAGCAATC
+
CCCFFFFFHHHHHJJJJJJJJJJJHIJJJJJJJIJJJJIHIHGGIIIGIGGIIJJJJJJIIIIGGIJJJJJJGHIIIGHGGHHGFFFFFFFFECCCEEDD
@HWI-ST330:173:D0M78ACXX:5:1101:3974:1981 2:N:0:GAGTGG
CCGCCGAGGTAAACCAGCTAATCCTAAAAAGTGTTGAGGGAAGAAAGTTAAATTTACACCGATAAACATTAATCAAAAGTGAATTTTTCCATAAACCTCA
+
BCCFFFFFHHHFHJIIJJJJJGJJIJJJJJJDGBHEFHHIEHIIIIF@@AGGIJIDHJHHHFFCDDCDCDDDEDDDDDA5>CDDDDDDCCDDDDCCCCC@
@HWI-ST330:173:D0M78ACXX:5:1101:4534:1968 2:N:0:GAGTGG
GGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAACGAAAGGGGAAGAGCCTAAACCGCAACGACCTAAC
+
CCCFFFFFHHGGHJJIJJIHIJJJJEHJIIJJIJJGIGGIFJIIJJGJJJHIJJIHCHHHHHFFDDDDDDDDDDB@BBD?BCDDDDDBD>BBD<>B5ACB
@HWI-ST330:173:D0M78ACXX:5:1101:4554:1987 2:N:0:GAGTGG
CAAGATTCTCAAGCTATTCTTGCTCACCAACAAAGTCAAGCAAGCAGCCAACAGAGTATGGAGATAGGTGCCACACCCCCTCCTCAACCTGTCAGACAAG
+
CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJHIJJJJIJJIJJJJIJIJJJJFHIJJJJJJJJJEHIJHHGHFFDDDDDDDDDDDCDDDDDDDDDD
@HWI-ST330:173:D0M78ACXX:5:1101:4665:1998 2:N:0:GAGTGG
ATGGACCTGGGCGACCCGACGATACCGATGGCCGCAATCATGGGTGAGAAGATCGGAAGAGCGTCGTGTAGGGGAAGAGTGTAGATCTCGGTGGGCGCCG
+
@@<DDFDFFBDDDHIFDGIGD@6BBCFGGIGAH;:AD6@>>>@A(,;?A;?A:><?(8;?A9;&2;08(+:@B&00(28+4+(4:::@3<??########
@HWI-ST330:173:D0M78ACXX:5:1101:4804:1971 2:N:0:GAGTGG
CTACGATAATAAAAATAATCACTGAAAGCATCTCAAGTGAGAAGTTAAATATTAATCTATGTTTCTAAAAACCGTTTGAGAATAAAACGTTGATAGGATC
+
CCCFFFFFHHHHHJJJJJJJJJJJJJJJIIIJJJJIIGIIJIIIGGIJJJJJJJJJJJJJJJJJJJIIEHIJIGHJGHHHFFFFFFEEDACDDDEDDDDD
@HWI-ST330:173:D0M78ACXX:5:1101:5019:1975 2:N:0:GAGTGG
ATTCCGTGCCAGCAGCCGCGGTAATACGGGAGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGTCCGCAGGCGGCCAAGCAAGTCTGTTGTTAAA
+
@BCDDD3AFDFFBF;CBGEH8?HH?GG;FEB0((((8CC2;(5=6?=5=D=;;A;;;>A@:3=@?A:0(+)09B&0&05&59<8<A9(+4:>>CC??>@: