tmap-3.2.0 nm output on OSX 10.8.2 showing undefined symbols

more_nm_output.txt

$ nm src/map/map2/tmap_map2_aux.o
0000000000006068 s EH_frame0
0000000000005c48 s L_.str
0000000000005c66 s L_.str1
0000000000005cb1 s L_.str2
0000000000005cc9 s L_.str3
0000000000005ce4 s L_.str4
0000000000005d04 s L_.str5
0000000000005d0a s L_.str6
0000000000005d13 s L_.str7
0000000000005d1c s L_.str8
0000000000005c9e s L___func__.tmap_map2_aln_init
0000000000005cb3 s L___func__.tmap_map2_aln_realloc
0000000000005cf2 s L___func__.tmap_map2_aux_aln
0000000000005cd1 s L___func__.tmap_map2_aux_core
0000000000005c4e s L___func__.tmap_sort_introsort_hit
0000000000005c85 s L___func__.tmap_sort_introsort_hitG
0000000000005c30 s L___func__.tmap_sort_mergesort_hit
0000000000005c6c s L___func__.tmap_sort_mergesort_hitG
                 U ___stack_chk_fail
                 U ___stack_chk_guard
                 U ___tmap_sort_insertsort_hit
                 U ___tmap_sort_insertsort_hitG
                 U _free
                 U _log
                 U _memcpy
                 U _memset
                 U _tmap_bwtl_destroy
                 U _tmap_bwtl_seq2bwtl
                 U _tmap_calloc1
                 U _tmap_malloc1
00000000000036c0 T _tmap_map2_aln_destroy
00000000000062d8 S _tmap_map2_aln_destroy.eh
0000000000003d80 T _tmap_map2_aln_init
0000000000006350 S _tmap_map2_aln_init.eh
0000000000003710 T _tmap_map2_aln_realloc
0000000000006300 S _tmap_map2_aln_realloc.eh
0000000000004a70 t _tmap_map2_aux_aln
00000000000063f0 s _tmap_map2_aux_aln.eh
0000000000003e40 T _tmap_map2_aux_core
00000000000063a0 S _tmap_map2_aux_core.eh
00000000000048f0 t _tmap_map2_aux_core_update_opt
00000000000063c8 s _tmap_map2_aux_core_update_opt.eh
0000000000005330 t _tmap_map2_aux_flag_fr
0000000000006440 s _tmap_map2_aux_flag_fr.eh
0000000000005200 t _tmap_map2_aux_merge_hits
0000000000006418 s _tmap_map2_aux_merge_hits.eh
00000000000038d0 T _tmap_map2_aux_resolve_duphits
0000000000006328 S _tmap_map2_aux_resolve_duphits.eh
0000000000003040 T _tmap_map2_aux_sa_pac_pos
00000000000062b0 S _tmap_map2_aux_sa_pac_pos.eh
0000000000005600 t _tmap_map2_aux_store_hits
0000000000006468 s _tmap_map2_aux_store_hits.eh
                 U _tmap_map2_chain_filter
                 U _tmap_map2_core_aln
0000000000003db0 t _tmap_map2_hit_nullify
0000000000006378 s _tmap_map2_hit_nullify.eh
                 U _tmap_map_sam_init
                 U _tmap_map_sam_malloc_aux
                 U _tmap_map_sams_init
                 U _tmap_map_sams_realloc
                 U _tmap_nt_char_to_int
                 U _tmap_rand_get
                 U _tmap_realloc1
                 U _tmap_refseq_pac2real
                 U _tmap_sa_pac_pos_hash
                 U _tmap_seq_clone
                 U _tmap_seq_destroy
                 U _tmap_seq_get_bases
0000000000000890 T _tmap_sort_combsort_hit
0000000000006120 S _tmap_sort_combsort_hit.eh
0000000000001ff0 T _tmap_sort_combsort_hitG
0000000000006238 S _tmap_sort_combsort_hitG.eh
0000000000000600 T _tmap_sort_heapadjust_hit
00000000000060a8 S _tmap_sort_heapadjust_hit.eh
0000000000001ce0 T _tmap_sort_heapadjust_hitG
00000000000061c0 S _tmap_sort_heapadjust_hitG.eh
0000000000000760 T _tmap_sort_heapmake_hit
00000000000060d0 S _tmap_sort_heapmake_hit.eh
0000000000001ec0 T _tmap_sort_heapmake_hitG
00000000000061e8 S _tmap_sort_heapmake_hitG.eh
00000000000007c0 T _tmap_sort_heapsort_hit
00000000000060f8 S _tmap_sort_heapsort_hit.eh
0000000000001f20 T _tmap_sort_heapsort_hitG
0000000000006210 S _tmap_sort_heapsort_hitG.eh
0000000000000a80 T _tmap_sort_introsort_hit
0000000000006148 S _tmap_sort_introsort_hit.eh
0000000000002210 T _tmap_sort_introsort_hitG
0000000000006260 S _tmap_sort_introsort_hitG.eh
0000000000000000 T _tmap_sort_mergesort_hit
0000000000006080 S _tmap_sort_mergesort_hit.eh
0000000000001680 T _tmap_sort_mergesort_hitG
0000000000006198 S _tmap_sort_mergesort_hitG.eh
00000000000011e0 T _tmap_sort_small_hit
0000000000006170 S _tmap_sort_small_hit.eh
0000000000002a90 T _tmap_sort_small_hitG
0000000000006288 S _tmap_sort_small_hitG.eh

nm_output.txt

$ nm src/index/tmap_bwt_match_hash.o
00000000000025c8 s EH_frame0
00000000000022b9 s L_.str
00000000000022e3 s L_.str1
00000000000022ed s L_.str2
00000000000022f5 s L_.str3
0000000000002320 s L_.str4
00000000000022a0 s L___func__.tmap_bwt_match_hash_init
00000000000022fd s L___func__.tmap_hash_init_tmap_bwt_match_hash
00000000000022be s L___func__.tmap_hash_resize_tmap_bwt_match_hash
0000000000002220 t ___inline_memset_chk
00000000000028d8 s ___inline_memset_chk.eh
                 U ___memset_chk
                 U _free
                 U _tmap_bwt_match_hash_2occ
0000000000000950 T _tmap_bwt_match_hash_cal_width_forward
0000000000002748 S _tmap_bwt_match_hash_cal_width_forward.eh
0000000000000ac0 T _tmap_bwt_match_hash_cal_width_reverse
0000000000002770 S _tmap_bwt_match_hash_cal_width_reverse.eh
0000000000000140 T _tmap_bwt_match_hash_clear
0000000000002658 S _tmap_bwt_match_hash_clear.eh
0000000000000080 T _tmap_bwt_match_hash_destroy
0000000000002608 S _tmap_bwt_match_hash_destroy.eh
0000000000000c60 T _tmap_bwt_match_hash_exact
0000000000002798 S _tmap_bwt_match_hash_exact.eh
0000000000001810 T _tmap_bwt_match_hash_exact_alt
0000000000002838 S _tmap_bwt_match_hash_exact_alt.eh
0000000000001920 T _tmap_bwt_match_hash_exact_alt_reverse
0000000000002860 S _tmap_bwt_match_hash_exact_alt_reverse.eh
0000000000001230 T _tmap_bwt_match_hash_exact_reverse
00000000000027e8 S _tmap_bwt_match_hash_exact_reverse.eh
0000000000000eb0 t _tmap_bwt_match_hash_forward_init
00000000000027c0 s _tmap_bwt_match_hash_forward_init.eh
0000000000000710 T _tmap_bwt_match_hash_get
00000000000026f8 S _tmap_bwt_match_hash_get.eh
0000000000000000 T _tmap_bwt_match_hash_init
00000000000025e0 S _tmap_bwt_match_hash_init.eh
0000000000001a40 T _tmap_bwt_match_hash_invPsi
0000000000002888 S _tmap_bwt_match_hash_invPsi.eh
                 U _tmap_bwt_match_hash_occ
00000000000002b0 T _tmap_bwt_match_hash_put
00000000000026a8 S _tmap_bwt_match_hash_put.eh
0000000000001490 t _tmap_bwt_match_hash_reverse_init
0000000000002810 s _tmap_bwt_match_hash_reverse_init.eh
                 U _tmap_calloc1
0000000000000190 t _tmap_hash_clear_tmap_bwt_match_hash
0000000000002680 s _tmap_hash_clear_tmap_bwt_match_hash.eh
00000000000000e0 t _tmap_hash_destroy_tmap_bwt_match_hash
0000000000002630 s _tmap_hash_destroy_tmap_bwt_match_hash.eh
00000000000007a0 t _tmap_hash_get_tmap_bwt_match_hash
0000000000002720 s _tmap_hash_get_tmap_bwt_match_hash.eh
0000000000002260 t _tmap_hash_init_tmap_bwt_match_hash
0000000000002900 s _tmap_hash_init_tmap_bwt_match_hash.eh
0000000000000310 t _tmap_hash_put_tmap_bwt_match_hash
00000000000026d0 s _tmap_hash_put_tmap_bwt_match_hash.eh
0000000000001c70 t _tmap_hash_resize_tmap_bwt_match_hash
00000000000028b0 s _tmap_hash_resize_tmap_bwt_match_hash.eh
                 U _tmap_malloc1
                 U _tmap_realloc1