stdin

stdin.txt

Making all in src
make[1]: Entering directory `/home/oadams/pialign-0.2.3/src'
Making all in include
make[2]: Entering directory `/home/oadams/pialign-0.2.3/src/include'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/home/oadams/pialign-0.2.3/src/include'
Making all in lib
make[2]: Entering directory `/home/oadams/pialign-0.2.3/src/lib'
/bin/sh ../../libtool --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../src/include/pialign  -I./../include   -g -O2 -MT base-phrasecooc.lo -MD -MP -MF .deps/base-phrasecooc.Tpo -c -o base-phrasecooc.lo base-phrasecooc.cc
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../../src/include/pialign -I./../include -g -O2 -MT base-phrasecooc.lo -MD -MP -MF .deps/base-phrasecooc.Tpo -c base-phrasecooc.cc  -fPIC -DPIC -o .libs/base-phrasecooc.o
In file included from base-phrasecooc.cc:2:0:
./../include/gng/counter.h: In instantiation of 'T gng::Counter<Key, T>::inc(const Key&, T) [with Key = int; T = int]':
base-phrasecooc.cc:81:34:   required from here
./../include/gng/counter.h:18:29: error: 'find' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
./../include/gng/counter.h:18:29: note: declarations in dependent base 'std::tr1::_Hashtable<int, std::pair<const int, int>, std::allocator<std::pair<const int, int> >, std::_Select1st<std::pair<const int, int> >, std::equal_to<int>, std::tr1::hash<int>, std::tr1::__detail::_Mod_range_hashing, std::tr1::__detail::_Default_ranged_hash, std::tr1::__detail::_Prime_rehash_policy, false, false, true>' are not found by unqualified lookup
./../include/gng/counter.h:18:29: note: use 'this->find' instead
In file included from base-phrasecooc.cc:4:0:
./../include/pialign/esa.hxx: In instantiation of 'index_type esaxx_private::suffixtree(string_type, sarray_type, sarray_type, sarray_type, sarray_type, index_type) [with string_type = __gnu_cxx::__normal_iterator<int*, std::vector<int, std::allocator<int> > >; sarray_type = __gnu_cxx::__normal_iterator<int*, std::vector<int, std::allocator<int> > >; index_type = int]':
./../include/pialign/esa.hxx:115:3:   required from 'int esaxx(string_type, sarray_type, sarray_type, sarray_type, sarray_type, index_type, index_type, index_type&) [with string_type = __gnu_cxx::__normal_iterator<int*, std::vector<int, std::allocator<int> > >; sarray_type = __gnu_cxx::__normal_iterator<int*, std::vector<int, std::allocator<int> > >; index_type = int]'
base-phrasecooc.cc:24:69:   required from here
./../include/pialign/esa.hxx:63:3: error: 'make_pair' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
In file included from /usr/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/utility:72:0,
                 from /usr/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/tr1/unordered_map:34,
                 from ./../include/gng/counter.h:4,
                 from base-phrasecooc.cc:2:
/usr/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/bits/stl_pair.h:278:5: note: 'template<class _T1, class _T2> std::pair<_T1, _T2> std::make_pair(_T1, _T2)' declared here, later in the translation unit
In file included from base-phrasecooc.cc:4:0:
./../include/pialign/esa.hxx:83:5: error: 'make_pair' was not declared in this scope, and no declarations were found by argument-dependent lookup at the point of instantiation [-fpermissive]
In file included from /usr/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/utility:72:0,
                 from /usr/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/tr1/unordered_map:34,
                 from ./../include/gng/counter.h:4,
                 from base-phrasecooc.cc:2:
/usr/lib/gcc/x86_64-unknown-linux-gnu/4.7.2/../../../../include/c++/4.7.2/bits/stl_pair.h:278:5: note: 'template<class _T1, class _T2> std::pair<_T1, _T2> std::make_pair(_T1, _T2)' declared here, later in the translation unit
make[2]: *** [base-phrasecooc.lo] Error 1
make[2]: Leaving directory `/home/oadams/pialign-0.2.3/src/lib'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/oadams/pialign-0.2.3/src'
make: *** [all-recursive] Error 1