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Created November 1, 2012 11:51
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Mugsy MAF file
Raw
test.maf
##maf version=1 scoring=mugsy
a score=32 label=12170 mult=2
s Escherichia_coli_O104_H4_2009EL_2071_uid176128.NC_018661.1 862446 32 + 5312586 AGGGCTTCATACTCTGCATCCCTGTCCCGGCT
s Escherichia_coli_O104_H4_2011C_3493_uid176127.NC_018658.1 868921 32 + 5273097 AGGGCTTCATACTCTGCATCCCTGTCCCGGCT
a score=32 label=12171 mult=2
s Escherichia_coli_SE11_uid59425.NC_011407.1 4743 32 + 6929 GCTGTTTACCAGTGATTTGGCTTCAGTATTGG
s Escherichia_coli_E24377A_uid58395.NC_009791.1 1062 32 + 5033 ACTGTTTACCAGTGATTAAGCTTCTGCATTGG
a score=35 label=12172 mult=2
s Shigella_flexneri_5_8401_uid58583.NC_008258.1 2066226 35 + 4574284 AACATAAAACACTATCAGTAAGTTGGAGTCATTAC
s Shigella_boydii_Sb227_uid58215.NC_007613.1 995050 35 + 4519823 AACATAAAACACTATCAGTAAGTTGGAGTCATTAC
a score=32 label=12173 mult=2
s Shigella_dysenteriae_Sd197_uid58213.NC_007606.1 1507870 32 + 4369232 GCGGCCACAGCAGTAAGACTTCCTTCCTGGTA
s Shigella_sonnei_Ss046_uid58217.NC_007384.1 1751426 32 + 4825265 GCGGCGACAGCAGTAAGACTTCCTTCCTGGTA
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