Created
May 12, 2020 00:07
-
-
Save rjeschmi/64940d15cbdb0c7e92c2a223584ab600 to your computer and use it in GitHub Desktop.
(partial) EasyBuild log for failed build of /tmp/eb-a1qutd5s/files_pr10615/z/zlib/zlib-1.2.11-GCCcore-10.1.0.eb (PR #10615)
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
== 2020-05-11 20:07:29,583 easyblock.py:280 INFO This is EasyBuild 4.2.1.dev0-r018337e94442d83ec32fd9a9a242273b69996b1b (framework: 4.2.1.dev0-r018337e94442d83ec32fd9a9a242273b69996b1b, easyblocks: 4.2.1.dev0-r052da71632c1622d61a943795adf06241933b2db) on host ryzen37. | |
== 2020-05-11 20:07:29,583 easyblock.py:286 INFO This is easyblock ConfigureMake from module easybuild.easyblocks.generic.configuremake (/home/rob/git/eb-devel-install/eb/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.py) | |
== 2020-05-11 20:07:29,583 easyblock.py:843 INFO Build dir set to /eb/arch-znver2/build/zlib/1.2.11/GCCcore-10.1.0 | |
== 2020-05-11 20:07:29,583 easyblock.py:903 INFO Software install dir set to /eb/arch-znver2/software/zlib/1.2.11-GCCcore-10.1.0 | |
== 2020-05-11 20:07:29,583 easyblock.py:908 INFO Module install dir set to /eb/arch-znver2/modules/all | |
== 2020-05-11 20:07:29,583 easyblock.py:265 INFO Init completed for application name zlib version 1.2.11 | |
== 2020-05-11 20:07:29,583 easyblock.py:3208 INFO Obtained application instance of for zlib (easyblock: ConfigureMake) | |
== 2020-05-11 20:07:30,585 one.py:159 INFO Skipping reformatting value for parameter 'toolchain' | |
== 2020-05-11 20:07:30,585 one.py:159 INFO Skipping reformatting value for parameter 'toolchainopts' | |
== 2020-05-11 20:07:30,585 filetools.py:1494 INFO Creating directory /tmp/eb-a1qutd5s/reprod_20200511200730_4145900 (parents: True, set_gid: False, sticky: False) | |
== 2020-05-11 20:07:30,586 easyblock.py:3385 INFO Dumped easyconfig instance to /tmp/eb-a1qutd5s/reprod_20200511200730_4145900/zlib-1.2.11-GCCcore-10.1.0.eb | |
== 2020-05-11 20:07:30,586 filetools.py:1494 INFO Creating directory /tmp/eb-a1qutd5s/reprod_20200511200730_4145900/easyblocks (parents: True, set_gid: False, sticky: False) | |
== 2020-05-11 20:07:30,586 filetools.py:2087 INFO /home/rob/git/eb-devel-install/eb/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.py copied to /tmp/eb-a1qutd5s/reprod_20200511200730_4145900/easyblocks/configuremake.py | |
== 2020-05-11 20:07:30,586 easyblock.py:3400 INFO Dumped easyblock configuremake.py required for reproduction to /tmp/eb-a1qutd5s/reprod_20200511200730_4145900/easyblocks | |
== 2020-05-11 20:07:30,586 easyblock.py:1635 INFO Number of iterations to perform for central part of installation procedure: 1 | |
== 2020-05-11 20:07:30,586 build_log.py:265 INFO building and installing zlib/1.2.11-GCCcore-10.1.0... | |
== 2020-05-11 20:07:30,586 filetools.py:1596 INFO Lock /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_zlib_1.2.11-GCCcore-10.1.0.lock does not exist | |
== 2020-05-11 20:07:30,586 filetools.py:1537 INFO Creating lock at /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_zlib_1.2.11-GCCcore-10.1.0.lock... | |
== 2020-05-11 20:07:30,586 filetools.py:1494 INFO Creating directory /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_zlib_1.2.11-GCCcore-10.1.0.lock (parents: True, set_gid: False, sticky: False) | |
== 2020-05-11 20:07:30,586 filetools.py:1546 INFO Lock created: /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_zlib_1.2.11-GCCcore-10.1.0.lock | |
== 2020-05-11 20:07:30,586 build_log.py:265 INFO fetching files... | |
== 2020-05-11 20:07:30,586 easyblock.py:2968 INFO Starting fetch step | |
== 2020-05-11 20:07:30,586 easyblock.py:2974 INFO Running method fetch_step part of step fetch | |
== 2020-05-11 20:07:30,586 easyblock.py:1744 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
== 2020-05-11 20:07:30,586 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/rob/git/eb-devel-install/eb/easybuild-framework/eb | |
== 2020-05-11 20:07:30,587 tools.py:282 INFO Not considering /home/rob/git/eb-devel-install/eb (no easybuild/easyconfigs subdir found) | |
== 2020-05-11 20:07:30,587 easyblock.py:671 INFO Found file zlib-1.2.11.tar.gz at /eb/sources/z/zlib/zlib-1.2.11.tar.gz | |
== 2020-05-11 20:07:30,587 easyblock.py:394 INFO Added sources: [{'name': 'zlib-1.2.11.tar.gz', 'path': '/eb/sources/z/zlib/zlib-1.2.11.tar.gz', 'cmd': None, 'checksum': 'c3e5e9fdd5004dcb542feda5ee4f0ff0744628baf8ed2dd5d66f8ca1197cb1a1', 'finalpath': '/eb/arch-znver2/build/zlib/1.2.11/GCCcore-10.1.0'}] | |
== 2020-05-11 20:07:30,587 easyblock.py:1785 INFO no patches provided | |
== 2020-05-11 20:07:30,588 easyblock.py:1795 INFO md5 checksum for /eb/sources/z/zlib/zlib-1.2.11.tar.gz: 1c9f62f0778697a09d36121ead88e08e | |
== 2020-05-11 20:07:30,588 easyblock.py:1795 INFO sha256 checksum for /eb/sources/z/zlib/zlib-1.2.11.tar.gz: c3e5e9fdd5004dcb542feda5ee4f0ff0744628baf8ed2dd5d66f8ca1197cb1a1 | |
== 2020-05-11 20:07:30,588 easyblock.py:1830 INFO Checking dirs that need to be created: ['/eb/arch-znver2/software/zlib/1.2.11-GCCcore-10.1.0', '/eb/arch-znver2/modules/all/zlib', '/eb/arch-znver2/modules/lib/zlib'] | |
== 2020-05-11 20:07:30,588 filetools.py:1494 INFO Creating directory /eb/arch-znver2/software/zlib/1.2.11-GCCcore-10.1.0 (parents: True, set_gid: False, sticky: False) | |
== 2020-05-11 20:07:30,588 filetools.py:1494 INFO Creating directory /eb/arch-znver2/modules/all/zlib (parents: True, set_gid: False, sticky: False) | |
== 2020-05-11 20:07:30,588 filetools.py:1494 INFO Creating directory /eb/arch-znver2/modules/lib/zlib (parents: True, set_gid: False, sticky: False) | |
== 2020-05-11 20:07:30,588 configuremake.py:125 INFO Found recent config.guess at /eb/sources/generic/eb_v4.2.1.dev0/ConfigureMake/config.guess, using it if required | |
== 2020-05-11 20:07:30,588 build_log.py:265 INFO creating build dir, resetting environment... | |
== 2020-05-11 20:07:30,589 easyblock.py:2968 INFO Starting ready step | |
== 2020-05-11 20:07:30,589 easyblock.py:2974 INFO Running method check_readiness_step part of step ready | |
== 2020-05-11 20:07:30,592 easyblock.py:1654 INFO Setting parallelism: 16 | |
== 2020-05-11 20:07:30,615 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '') | |
== 2020-05-11 20:07:30,616 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
== 2020-05-11 20:07:30,616 easyblock.py:1693 WARNING Loaded modules detected: ['EasyBuild-znver2'] | |
== 2020-05-11 20:07:30,616 easyblock.py:2974 INFO Running method make_builddir part of step ready | |
== 2020-05-11 20:07:30,616 filetools.py:1494 INFO Creating directory /eb/arch-znver2/build/zlib/1.2.11/GCCcore-10.1.0 (parents: True, set_gid: False, sticky: False) | |
== 2020-05-11 20:07:30,616 easyblock.py:2974 INFO Running method reset_env part of step ready | |
== 2020-05-11 20:07:30,616 easyblock.py:2974 INFO Running method handle_iterate_opts part of step ready | |
== 2020-05-11 20:07:30,616 build_log.py:265 INFO unpacking... | |
== 2020-05-11 20:07:30,616 easyblock.py:2968 INFO Starting source step | |
== 2020-05-11 20:07:30,616 easyblock.py:2974 INFO Running method checksum_step part of step source | |
== 2020-05-11 20:07:30,617 easyblock.py:1846 INFO Checksum verification for /eb/sources/z/zlib/zlib-1.2.11.tar.gz using c3e5e9fdd5004dcb542feda5ee4f0ff0744628baf8ed2dd5d66f8ca1197cb1a1 passed. | |
== 2020-05-11 20:07:30,617 easyblock.py:2974 INFO Running method extract_step part of step source | |
== 2020-05-11 20:07:30,617 easyblock.py:1933 INFO Unpacking source zlib-1.2.11.tar.gz | |
== 2020-05-11 20:07:30,617 run.py:222 INFO running cmd: tar xzf /eb/sources/z/zlib/zlib-1.2.11.tar.gz | |
== 2020-05-11 20:07:30,632 build_log.py:265 INFO patching... | |
== 2020-05-11 20:07:30,632 easyblock.py:2968 INFO Starting patch step | |
== 2020-05-11 20:07:30,633 easyblock.py:2974 INFO Running method patch_step part of step patch | |
== 2020-05-11 20:07:30,633 build_log.py:265 INFO preparing... | |
== 2020-05-11 20:07:30,633 easyblock.py:2968 INFO Starting prepare step | |
== 2020-05-11 20:07:30,633 easyblock.py:2974 INFO Running method prepare_step part of step prepare | |
== 2020-05-11 20:07:30,657 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to (previous value: '') | |
== 2020-05-11 20:07:30,657 environment.py:97 INFO Environment variable LD_PRELOAD set to (previous value: '') | |
== 2020-05-11 20:07:30,658 build_log.py:169 ERROR EasyBuild crashed with an error (at easybuild/base/exceptions.py:124 in __init__): Missing modules for dependencies (use --robot?): binutils/2.34 (at easybuild/tools/toolchain/toolchain.py:503 in _check_dependencies) | |
== 2020-05-11 20:07:30,658 filetools.py:1604 INFO Removing lock /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_zlib_1.2.11-GCCcore-10.1.0.lock... | |
== 2020-05-11 20:07:30,658 filetools.py:329 INFO Path /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_zlib_1.2.11-GCCcore-10.1.0.lock successfully removed. | |
== 2020-05-11 20:07:30,658 filetools.py:1608 INFO Lock removed: /eb/arch-znver2/software/.locks/_eb_arch-znver2_software_zlib_1.2.11-GCCcore-10.1.0.lock | |
== 2020-05-11 20:07:30,658 easyblock.py:3238 WARNING build failed (first 300 chars): Missing modules for dependencies (use --robot?): binutils/2.34 | |
== 2020-05-11 20:07:30,658 easyblock.py:295 INFO Closing log for application name zlib version 1.2.11 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment