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boegel/easybuild_test_report_easyconfigs_pr4412_20171929-UTC-20-19-30.md

Created March 29, 2017 20:19
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EasyBuild test report for easyconfigs PR #4412
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easybuild_test_report_easyconfigs_pr4412_20171929-UTC-20-19-30.md

Test report for easybuilders/easybuild-easyconfigs#4412

Test result

Build succeeded for 33 out of 33 (4 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS Java-1.8.0_121.eb
  • SUCCESS GCC-5.4.0-2.26.eb
  • SUCCESS OpenBLAS-0.2.18-GCC-5.4.0-2.26-LAPACK-3.6.1.eb
  • SUCCESS numactl-2.0.11-GCC-5.4.0-2.26.eb
  • SUCCESS hwloc-1.11.3-GCC-5.4.0-2.26.eb
  • SUCCESS OpenMPI-1.10.3-GCC-5.4.0-2.26.eb
  • SUCCESS gompi-2016b.eb
  • SUCCESS FFTW-3.3.4-gompi-2016b.eb
  • SUCCESS ScaLAPACK-2.0.2-gompi-2016b-OpenBLAS-0.2.18-LAPACK-3.6.1.eb
  • SUCCESS foss-2016b.eb
  • SUCCESS PCRE-8.38-foss-2016b.eb
  • SUCCESS bzip2-1.0.6-foss-2016b.eb
  • SUCCESS zlib-1.2.8-foss-2016b.eb
  • SUCCESS ncurses-6.0-foss-2016b.eb
  • SUCCESS Tcl-8.6.5-foss-2016b.eb
  • SUCCESS Bazel-0.4.5-foss-2016b.eb
  • SUCCESS libreadline-6.3-foss-2016b.eb
  • SUCCESS SQLite-3.13.0-foss-2016b.eb
  • SUCCESS Tk-8.6.5-foss-2016b.eb
  • SUCCESS libffi-3.2.1-foss-2016b.eb
  • SUCCESS ncurses-6.0.eb
  • SUCCESS M4-1.4.17-foss-2016b.eb
  • SUCCESS gettext-0.19.8.eb
  • SUCCESS Autoconf-2.69-foss-2016b.eb
  • SUCCESS Automake-1.15-foss-2016b.eb
  • SUCCESS libtool-2.4.6-foss-2016b.eb
  • SUCCESS Autotools-20150215-foss-2016b.eb
  • SUCCESS GMP-6.1.1-foss-2016b.eb
  • SUCCESS XZ-5.2.2-foss-2016b.eb
  • SUCCESS Python-3.5.2-foss-2016b.eb
  • SUCCESS SWIG-3.0.10-foss-2016b-Python-3.5.2.eb
  • SUCCESS wheel-0.30.0a0-foss-2016b-Python-3.5.2.eb
  • SUCCESS TensorFlow-1.0.1-foss-2016b-Python-3.5.2.eb

Time info

  • start: Wed, 29 Mar 2017 19:00:50 +0000 (UTC)
  • end: Wed, 29 Mar 2017 20:19:30 +0000 (UTC)

EasyBuild info

  • easybuild-framework version: 3.2.0.dev0
  • easybuild-easyblocks version: 3.2.0.dev0
  • command line:
eb --from-pr 4412 --upload-test-report --github-user=boegel -ldfr
  • full configuration (includes defaults):
--buildpath='/tmp/vsc40023/easybuild_build'
--cleanup-builddir
--cleanup-tmpdir
--color='auto'
--debug
--default-opt-level='defaultopt'
--disable-add-dummy-to-minimal-toolchains
--disable-allow-modules-tool-mismatch
--disable-allow-use-as-root-and-accept-consequences
--disable-avail-cfgfile-constants
--disable-avail-easyconfig-constants
--disable-avail-easyconfig-licenses
--disable-avail-easyconfig-params
--disable-avail-easyconfig-templates
--disable-avail-module-naming-schemes
--disable-avail-modules-tools
--disable-avail-repositories
--disable-check-conflicts
--disable-check-github
--disable-check-style
--disable-consider-archived-easyconfigs
--disable-debug-lmod
--disable-devel
--disable-dry-run
--disable-dry-run-short
--disable-dump-autopep8
--disable-dump-env-script
--disable-experimental
--disable-extended-dry-run
--disable-fixed-installdir-naming-scheme
--disable-group-writable-installdir
--disable-hidden
--disable-ignore-osdeps
--disable-info
--disable-install-github-token
--disable-install-latest-eb-release
--disable-job
--disable-last-log
--disable-list-toolchains
--disable-minimal-toolchains
--disable-module-only
--disable-new-pr
--disable-package
--disable-pretend
--disable-quiet
--disable-read-only-installdir
--disable-rebuild
--disable-recursive-module-unload
--disable-regtest
--disable-rpath
--disable-sequential
--disable-set-default-module
--disable-set-gid-bit
--disable-show-config
--disable-show-default-configfiles
--disable-show-default-moduleclasses
--disable-show-full-config
--disable-skip
--disable-skip-test-cases
--disable-sticky-bit
--disable-terse
--disable-update-modules-tool-cache
--disable-use-existing-modules
--extended-dry-run-ignore-errors
--force
--from-pr='4412'
--github-user='boegel'
--ignore-dirs='.git,.svn'
--include-easyblocks=''
--include-module-naming-schemes=''
--include-toolchains=''
--installpath='/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib'
--job-backend='PbsPython'
--job-max-walltime='24'
--job-output-dir='/vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023'
--job-polling-interval='30.0'
--logfile-format='easybuild,easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log'
--logtostdout
--module-naming-scheme='EasyBuildMNS'
--module-syntax='Lua'
--moduleclasses='base,bio,cae,chem,compiler,data,debugger,devel,geo,ide,lang,lib,math,mpi,numlib,perf,phys,system,toolchain,tools,vis'
--modules-tool='Lmod'
--mpi-tests
--output-format='txt'
--package-naming-scheme='EasyBuildPNS'
--package-release='1'
--package-tool='fpm'
--package-type='rpm'
--packagepath='/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/packages'
--pr-target-account='hpcugent'
--pr-target-branch='develop'
--pr-target-repo='easybuild-easyconfigs'
--prefix='/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib'
--repository='FileRepository'
--repositorypath='/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/ebfiles_repo'
--robot-paths=''
--robot='/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages/easybuild_easyconfigs-3.2.0.dev0-py2.7.egg/easybuild/easyconfigs'
--sourcepath='/user/data/gent/vsc400/vsc40023/EasyBuild/sources:/apps/gent/source:/nfsmuk/apps/gent/source/'
--strict='warn'
--subdir-modules='modules'
--subdir-software='software'
--suffix-modules-path='all'
--upload-test-report
--use-ccache='/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/ccache/CO7/haswell-ib'
--use-f90cache='False'

System info

  • core count: 24
  • cpu model: Intel(R) Xeon(R) CPU E5-2680 v3 @ 2.50GHz
  • cpu speed: 2500.0
  • cpu vendor: Intel
  • gcc version: Using built-in specs.; COLLECT_GCC=gcc; COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper; Target: x86_64-redhat-linux; Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux; Thread model: posix; gcc version 4.8.5 20150623 (Red Hat 4.8.5-11) (GCC) ;
  • glibc version: 2.17
  • hostname: node2520.golett.os
  • os name: centos linux
  • os type: Linux
  • os version: 7.3.1611
  • platform name: x86_64-unknown-linux
  • python version: 2.7.5 (default, Nov 6 2016, 00:28:07) ; [GCC 4.8.5 20150623 (Red Hat 4.8.5-11)]
  • system gcc path: /bin/gcc
  • system python path: /bin/python
  • total memory: 64303

List of loaded modules

  • cluster/golett

Environment

BASH_FUNC_ml() = () {  eval $(ORIG_LD_LIBRARY_PATH=${LD_LIBRARY_PATH:-} ORIG_LD_PRELOAD=${LD_PRELOAD:-} LD_LIBRARY_PATH="" LD_PRELOAD="" $LMOD_DIR/ml_cmd "$@")
}
BASH_FUNC_module() = () {  eval $(ORIG_LD_LIBRARY_PATH=${LD_LIBRARY_PATH:-} ORIG_LD_PRELOAD=${LD_PRELOAD:-} LD_LIBRARY_PATH="" LD_PRELOAD="" $LMOD_CMD bash "$@");
 [ $? = 0 ] && eval $(${LMOD_SETTARG_CMD:-:} -s sh)
}
CCACHE_COMPILERCHECK = echo %compiler%; %compiler% -v; %compiler% -dumpmachine
CCACHE_COMPRESS = true
CCACHE_MAXFILES = 1000000
CCACHE_MAXSIZE = 0
CCACHE_NLEVELS = 4
EASYBUILD_BUILDPATH = /tmp/vsc40023/easybuild_build
EASYBUILD_GITHUB_USER = boegel
EASYBUILD_JOB_BACKEND = PbsPython
EASYBUILD_PREFIX = /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib
EASYBUILD_SOURCEPATH = /user/data/gent/vsc400/vsc40023/EasyBuild/sources:/apps/gent/source:/nfsmuk/apps/gent/source/
EASYBUILD_USE_CCACHE = /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/ccache/CO7/haswell-ib
ENVIRONMENT = BATCH
F90CACHE_NLEVELS = 4
FANCYLOGGER_IGNORE_MPI4PY = 1
HISTCONTROL = ignoredups
HISTSIZE = 1000
HOME = /user/home/gent/vsc400/vsc40023
HOSTNAME = node2520.golett.os
HPCUGENT_FAMILY_CLUSTER = cluster
HPCUGENT_FAMILY_CLUSTER_VERSION = golett
LANG = en_US.utf8
LC_ALL = en_US.utf8
LC_MONETARY = nl_BE.UTF-8
LC_NUMERIC = nl_BE.UTF-8
LC_TIME = nl_BE.UTF-8
LESSOPEN = ||/usr/bin/lesspipe.sh %s
LMOD_CMD = /usr/share/lmod/lmod/libexec/lmod
LMOD_DEFAULT_MODULEPATH = /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
LMOD_DIR = /usr/share/lmod/lmod/libexec
LMOD_FAMILY_CLUSTER = cluster
LMOD_FAMILY_CLUSTER_VERSION = golett
LMOD_PKG = /usr/share/lmod/lmod
LMOD_SHORT_TIME = 86400
LMOD_SYSTEM_NAME = CO7-haswell
LMOD_VERSION = 6.6
LOADEDMODULES = cluster/golett
LOGNAME = vsc40023
MAIL = /var/spool/mail/vsc40023
MANPATH = :
MODULEPATH = /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
MODULESHOME = /usr/share/lmod/lmod
NUM_PROCS = 24
PATH = /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin
PBS_ARRAYID = 4412
PBS_DEFAULT = master19.golett.gent.vsc
PBS_ENVIRONMENT = PBS_BATCH
PBS_GPUFILE = /var/spool/pbs/aux//961200[4412].master19.golett.gent.vscgpu
PBS_JOBCOOKIE = CCD89358B3A9057EE63C2282EEF12FA0
PBS_JOBID = 961200[4412].master19.golett.gent.vsc
PBS_JOBNAME = eb_from_pr.sh-4412
PBS_MICFILE = /var/spool/pbs/aux//961200[4412].master19.golett.gent.vscmic
PBS_MOMPORT = 15003
PBS_NODEFILE = /var/spool/pbs/aux//961200[4412].master19.golett.gent.vsc
PBS_NODENUM = 0
PBS_NP = 24
PBS_NUM_NODES = 1
PBS_NUM_PPN = 24
PBS_O_HOME = /user/home/gent/vsc400/vsc40023
PBS_O_HOST = gligar01.gligar.gent.vsc
PBS_O_LANG = en_US.utf8
PBS_O_LOGNAME = vsc40023
PBS_O_MAIL = /var/mail/vsc40023
PBS_O_PATH = /user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/bin:/usr/local/bin:/usr/bin
PBS_O_QUEUE = default
PBS_O_SERVER = master19.golett.gent.vsc
PBS_O_SHELL = /bin/bash
PBS_O_SUBMIT_FILTER = /usr/bin/submitfilter
PBS_O_WORKDIR = /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023
PBS_QUEUE = short
PBS_TASKNUM = 1
PBS_VERSION = TORQUE-6.0
PBS_VNODENUM = 0
PBS_WALLTIME = 36000
PWD = /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023
PYTHONOPTIMIZE = 1
PYTHONPATH = /user/home/gent/vsc400/vsc40023/.local/keyring/lib/python2.7/site-packages/keyring-3.8:/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.7/site-packages:
PYTHON_EGG_CACHE = /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/python-eggs
QT_GRAPHICSSYSTEM_CHECKED = 1
SHELL = /bin/bash
SHLVL = 3
TMPDIR = /local/961200[4412].master19.golett.gent.vsc
USER = vsc40023
VSCPROFILELOADED = 1
VSC_ARCH_LOCAL = haswell
VSC_ARCH_SUFFIX = -ib
VSC_DATA = /user/data/gent/vsc400/vsc40023
VSC_DATA_VO = /user/data/gent/gvo000/gvo00002
VSC_DATA_VO_USER = /user/data/gent/gvo000/gvo00002/vsc40023
VSC_DEFAULT_CLUSTER_MODULE = golett
VSC_HOME = /user/home/gent/vsc400/vsc40023
VSC_INSTITUTE = gent
VSC_INSTITUTE_CLUSTER = golett
VSC_INSTITUTE_LOCAL = gent
VSC_OS_LOCAL = CO7
VSC_SCRATCH = /user/scratch/gent/vsc400/vsc40023
VSC_SCRATCH_CLUSTER = /local
VSC_SCRATCH_DELCATTY = /user/scratchdelcatty/gent/vsc400/vsc40023
VSC_SCRATCH_DELCATTY_VO = /user/scratchdelcatty/gent/gvo000/gvo00002
VSC_SCRATCH_DELCATTY_VO_USER = /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023
VSC_SCRATCH_NODE = /local
VSC_SCRATCH_PHANPY = /user/scratchphanpy/gent/vsc400/vsc40023
VSC_SCRATCH_PHANPY_VO = /user/scratchphanpy/gent/gvo000/gvo00002
VSC_SCRATCH_PHANPY_VO_USER = /user/scratchphanpy/gent/gvo000/gvo00002/vsc40023
VSC_SCRATCH_SITE = /user/scratch/gent/vsc400/vsc40023
VSC_SCRATCH_VO = /user/scratch/gent/gvo000/gvo00002
VSC_SCRATCH_VO_USER = /user/scratch/gent/gvo000/gvo00002/vsc40023
VSC_VO = gvo00002
_ = /bin/python2
_LMFILES_ = /etc/modulefiles/vsc/cluster/golett.lua
_ModuleTable001_ = 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
_ModuleTable002_ = LH0sfSxbInNob3J0Il09ImNsdXN0ZXIiLFsic3RhdHVzIl09ImFjdGl2ZSIsfSx9LG1wYXRoQT17Ii91c2VyL2hvbWUvZ2VudC92c2M0MDAvdnNjNDAwMjMvZWJfcGhhbnB5c2NyYXRjaC9DTzcvaGFzd2VsbC1pYi9tb2R1bGVzL2FsbCIsIi9ldGMvbW9kdWxlZmlsZXMvdnNjIix9LFsic3lzdGVtQmFzZU1QQVRIIl09Ii9ldGMvbW9kdWxlZmlsZXMvdnNjIixbInZlcnNpb24iXT0yLH0=
_ModuleTable_Sz_ = 2
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