Created
March 20, 2021 04:18
-
-
Save r-rmcgibbo/7f3763c5d5cbd8322bc5fb1fb4cf08a7 to your computer and use it in GitHub Desktop.
system: x86_64-linux | build_time: 5 seconds | https://github.com/NixOS/nixpkgs/pull/117004
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Sourcing python-remove-tests-dir-hook | |
| Sourcing python-catch-conflicts-hook.sh | |
| Sourcing python-remove-bin-bytecode-hook.sh | |
| Sourcing setuptools-build-hook | |
| Using setuptoolsBuildPhase | |
| Using setuptoolsShellHook | |
| Sourcing pip-install-hook | |
| Using pipInstallPhase | |
| Sourcing python-imports-check-hook.sh | |
| Using pythonImportsCheckPhase | |
| Sourcing python-namespaces-hook | |
| Sourcing setuptools-check-hook | |
| Using setuptoolsCheckPhase | |
| @nix { "action": "setPhase", "phase": "unpackPhase" } | |
| unpacking sources | |
| unpacking source archive /nix/store/7ji7x5jiq30w81vs7i0zwwxsc74agmal-pyBigWig-0.3.18.tar.gz | |
| source root is pyBigWig-0.3.18 | |
| setting SOURCE_DATE_EPOCH to timestamp 1612701986 of file pyBigWig-0.3.18/setup.cfg | |
| @nix { "action": "setPhase", "phase": "patchPhase" } | |
| patching sources | |
| @nix { "action": "setPhase", "phase": "configurePhase" } | |
| configuring | |
| no configure script, doing nothing | |
| @nix { "action": "setPhase", "phase": "buildPhase" } | |
| building | |
| Executing setuptoolsBuildPhase | |
| Either libcurl isn't installed, it didn't come with curl-config, or curl-config isn't in your $PATH. pyBigWig will be installed without support for remote files. | |
| /nix/store/v3bj7jrns4sk6yj2rp30p6v2l7p707az-python3-3.8.8/lib/python3.8/distutils/dist.py:274: UserWarning: Unknown distribution option: 'classifier' | |
| warnings.warn(msg) | |
| running bdist_wheel | |
| running build | |
| running build_py | |
| creating build | |
| creating build/lib.linux-x86_64-3.8 | |
| creating build/lib.linux-x86_64-3.8/pyBigWigTest | |
| copying pyBigWigTest/test.py -> build/lib.linux-x86_64-3.8/pyBigWigTest | |
| copying pyBigWigTest/__init__.py -> build/lib.linux-x86_64-3.8/pyBigWigTest | |
| running egg_info | |
| writing pyBigWig.egg-info/PKG-INFO | |
| writing dependency_links to pyBigWig.egg-info/dependency_links.txt | |
| writing requirements to pyBigWig.egg-info/requires.txt | |
| writing top-level names to pyBigWig.egg-info/top_level.txt | |
| reading manifest file 'pyBigWig.egg-info/SOURCES.txt' | |
| reading manifest template 'MANIFEST.in' | |
| writing manifest file 'pyBigWig.egg-info/SOURCES.txt' | |
| copying pyBigWigTest/test.bigBed -> build/lib.linux-x86_64-3.8/pyBigWigTest | |
| copying pyBigWigTest/test.bw -> build/lib.linux-x86_64-3.8/pyBigWigTest | |
| running build_ext | |
| building 'pyBigWig' extension | |
| Warning: Can't read registry to find the necessary compiler setting | |
| Make sure that Python modules winreg, win32api or win32con are installed. | |
| C compiler: gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC | |
| creating build/temp.linux-x86_64-3.8 | |
| creating build/temp.linux-x86_64-3.8/libBigWig | |
| compile options: '-DNOCURL -DWITHNUMPY -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -IlibBigWig -I/nix/store/v3bj7jrns4sk6yj2rp30p6v2l7p707az-python3-3.8.8/include/python3.8 -I/nix/store/ig8k10p25j5z36pgadgx33f72lzm7sr1-python3.8-numpy-1.20.1/lib/python3.8/site-packages/numpy/core/include -I/nix/store/v3bj7jrns4sk6yj2rp30p6v2l7p707az-python3-3.8.8/include/python3.8 -c' | |
| gcc: libBigWig/io.c | |
| gcc: libBigWig/bwStats.c | |
| gcc: libBigWig/bwWrite.c | |
| gcc: libBigWig/bwRead.c | |
| gcc: libBigWig/bwValues.c | |
| gcc: pyBigWig.c | |
| pyBigWig.c: In function ‘PyString_AsString’: | |
| pyBigWig.c:773:12: warning: return discards ‘const’ qualifier from pointer target type [8;;https://gcc.gnu.org/onlinedocs/gcc/Warning-Options.html#index-Wdiscarded-qualifiers-Wdiscarded-qualifiers8;;] | |
| 773 | return PyUnicode_AsUTF8(obj); | |
| | ^~~~~~~~~~~~~~~~~~~~~ | |
| gcc -shared -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-zlib-1.2.11/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-bzip2-1.0.6.0.2/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-expat-2.2.10/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-xz-5.2.5/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-libffi-3.3/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-gdbm-1.19/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-sqlite-3.34.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-readline-6.3p08/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-ncurses-6.2/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-openssl-1.1.1j/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-zlib-1.2.11/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-bzip2-1.0.6.0.2/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-expat-2.2.10/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-xz-5.2.5/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-libffi-3.3/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-gdbm-1.19/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-sqlite-3.34.1/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-readline-6.3p08/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-ncurses-6.2/lib -L/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-openssl-1.1.1j/lib build/temp.linux-x86_64-3.8/libBigWig/io.o build/temp.linux-x86_64-3.8/libBigWig/bwStats.o build/temp.linux-x86_64-3.8/libBigWig/bwWrite.o build/temp.linux-x86_64-3.8/libBigWig/bwRead.o build/temp.linux-x86_64-3.8/libBigWig/bwValues.o build/temp.linux-x86_64-3.8/pyBigWig.o -L/nix/store/ig8k10p25j5z36pgadgx33f72lzm7sr1-python3.8-numpy-1.20.1/lib/python3.8/site-packages/numpy/core/lib -L/nix/store/v3bj7jrns4sk6yj2rp30p6v2l7p707az-python3-3.8.8/lib -L/nix/store/v3bj7jrns4sk6yj2rp30p6v2l7p707az-python3-3.8.8/lib/python3.8/config-3.8-x86_64-linux-gnu -L/nix/store/v3bj7jrns4sk6yj2rp30p6v2l7p707az-python3-3.8.8/lib -lm -lz -lpython3.8 -lnpymath -lm -o build/lib.linux-x86_64-3.8/pyBigWig.cpython-38-x86_64-linux-gnu.so | |
| installing to build/bdist.linux-x86_64/wheel | |
| running install | |
| running install_lib | |
| creating build/bdist.linux-x86_64 | |
| creating build/bdist.linux-x86_64/wheel | |
| copying build/lib.linux-x86_64-3.8/pyBigWig.cpython-38-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel | |
| creating build/bdist.linux-x86_64/wheel/pyBigWigTest | |
| copying build/lib.linux-x86_64-3.8/pyBigWigTest/test.bw -> build/bdist.linux-x86_64/wheel/pyBigWigTest | |
| copying build/lib.linux-x86_64-3.8/pyBigWigTest/test.bigBed -> build/bdist.linux-x86_64/wheel/pyBigWigTest | |
| copying build/lib.linux-x86_64-3.8/pyBigWigTest/test.py -> build/bdist.linux-x86_64/wheel/pyBigWigTest | |
| copying build/lib.linux-x86_64-3.8/pyBigWigTest/__init__.py -> build/bdist.linux-x86_64/wheel/pyBigWigTest | |
| running install_egg_info | |
| Copying pyBigWig.egg-info to build/bdist.linux-x86_64/wheel/pyBigWig-0.3.18-py3.8.egg-info | |
| running install_scripts | |
| adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") | |
| creating build/bdist.linux-x86_64/wheel/pyBigWig-0.3.18.dist-info/WHEEL | |
| creating 'dist/pyBigWig-0.3.18-cp38-cp38-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it | |
| adding 'pyBigWig.cpython-38-x86_64-linux-gnu.so' | |
| adding 'pyBigWigTest/__init__.py' | |
| adding 'pyBigWigTest/test.bigBed' | |
| adding 'pyBigWigTest/test.bw' | |
| adding 'pyBigWigTest/test.py' | |
| adding 'pyBigWig-0.3.18.dist-info/LICENSE.txt' | |
| adding 'pyBigWig-0.3.18.dist-info/METADATA' | |
| adding 'pyBigWig-0.3.18.dist-info/WHEEL' | |
| adding 'pyBigWig-0.3.18.dist-info/top_level.txt' | |
| adding 'pyBigWig-0.3.18.dist-info/RECORD' | |
| removing build/bdist.linux-x86_64/wheel | |
| Finished executing setuptoolsBuildPhase | |
| @nix { "action": "setPhase", "phase": "installPhase" } | |
| installing | |
| Executing pipInstallPhase | |
| /build/pyBigWig-0.3.18/dist /build/pyBigWig-0.3.18 | |
| Processing ./pyBigWig-0.3.18-cp38-cp38-linux_x86_64.whl | |
| Installing collected packages: pyBigWig | |
| Successfully installed pyBigWig-0.3.18 | |
| /build/pyBigWig-0.3.18 | |
| Finished executing pipInstallPhase | |
| @nix { "action": "setPhase", "phase": "fixupPhase" } | |
| post-installation fixup | |
| shrinking RPATHs of ELF executables and libraries in /nix/store/chfssd92nrnv17h2llvrc320qd06ws5a-python3.8-pyBigWig-0.3.18 | |
| shrinking /nix/store/chfssd92nrnv17h2llvrc320qd06ws5a-python3.8-pyBigWig-0.3.18/lib/python3.8/site-packages/pyBigWig.cpython-38-x86_64-linux-gnu.so | |
| strip is /nix/store/xdii8qvch5h8chyp0z2is2qzky565w68-binutils-2.35.1/bin/strip | |
| stripping (with command strip and flags -S) in /nix/store/chfssd92nrnv17h2llvrc320qd06ws5a-python3.8-pyBigWig-0.3.18/lib | |
| patching script interpreter paths in /nix/store/chfssd92nrnv17h2llvrc320qd06ws5a-python3.8-pyBigWig-0.3.18 | |
| checking for references to /build/ in /nix/store/chfssd92nrnv17h2llvrc320qd06ws5a-python3.8-pyBigWig-0.3.18... | |
| Executing pythonRemoveTestsDir | |
| Finished executing pythonRemoveTestsDir | |
| @nix { "action": "setPhase", "phase": "installCheckPhase" } | |
| running install tests | |
| no Makefile or custom installCheckPhase, doing nothing | |
| @nix { "action": "setPhase", "phase": "pythonCatchConflictsPhase" } | |
| pythonCatchConflictsPhase | |
| @nix { "action": "setPhase", "phase": "pythonRemoveBinBytecodePhase" } | |
| pythonRemoveBinBytecodePhase | |
| @nix { "action": "setPhase", "phase": "pythonImportsCheckPhase" } | |
| pythonImportsCheckPhase | |
| Executing pythonImportsCheckPhase | |
| @nix { "action": "setPhase", "phase": "setuptoolsCheckPhase" } | |
| setuptoolsCheckPhase | |
| Executing setuptoolsCheckPhase | |
| Either libcurl isn't installed, it didn't come with curl-config, or curl-config isn't in your $PATH. pyBigWig will be installed without support for remote files. | |
| /nix/store/v3bj7jrns4sk6yj2rp30p6v2l7p707az-python3-3.8.8/lib/python3.8/distutils/dist.py:274: UserWarning: Unknown distribution option: 'classifier' | |
| warnings.warn(msg) | |
| running test | |
| WARNING: Testing via this command is deprecated and will be removed in a future version. Users looking for a generic test entry point independent of test runner are encouraged to use tox. | |
| running egg_info | |
| writing pyBigWig.egg-info/PKG-INFO | |
| writing dependency_links to pyBigWig.egg-info/dependency_links.txt | |
| writing requirements to pyBigWig.egg-info/requires.txt | |
| writing top-level names to pyBigWig.egg-info/top_level.txt | |
| reading manifest file 'pyBigWig.egg-info/SOURCES.txt' | |
| reading manifest template 'MANIFEST.in' | |
| writing manifest file 'pyBigWig.egg-info/SOURCES.txt' | |
| running build_ext | |
| copying build/lib.linux-x86_64-3.8/pyBigWig.cpython-38-x86_64-linux-gnu.so -> | |
| ---------------------------------------------------------------------- | |
| Ran 0 tests in 0.000s | |
| OK | |
| Finished executing setuptoolsCheckPhase | |
| @nix { "action": "setPhase", "phase": "pytestcachePhase" } | |
| pytestcachePhase |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment