http:www.earthchem.orglibrarybrowseviewid=1472.ipynb

{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "id": "344a9c94",
   "metadata": {
    "papermill": {},
    "tags": [
     "parameters"
    ]
   },
   "outputs": [],
   "source": [
    "#github.com/nteract/papermill'parameters'tag used to inject them into template then post a gist runable by colab\n",
    "url,ext,urn=None,None,None\n",
    "%load_ext rpy2.ipython\n",
    "%load_ext google.colab.data_table\n",
    "import httpimport\n",
    "with httpimport.github_repo('earthcube', 'earthcube_utilities'):\n",
    "  import earthcube_utilities as ec\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "13fb4c32",
   "metadata": {
    "tags": [
     "injected-parameters"
    ]
   },
   "outputs": [],
   "source": [
    "# Parameters\n",
    "url = \"http://www.earthchem.org/library/browse/view?id=1472\"\n",
    "ext = \"application/vnd.ms-excel\"\n",
    "urn = \"urn:gleaner:summoned:iedadata:ba30bda189c8a02c0dcc491b0e408779e48834b2\"\n",
    "q = None\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "id": "633f8b4f",
   "metadata": {
    "papermill": {},
    "tags": []
   },
   "outputs": [],
   "source": [
    "ec.wget_rdf(urn)\n",
    "#!ls -l   or FilePaneBrowser on left, to see it\n",
    "df=ec.read_file(url,ext)\n",
    "df"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "id": "99a27fb6",
   "metadata": {
    "papermill": {},
    "tags": []
   },
   "outputs": [],
   "source": [
    "!ls -l "
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "id": "729f7405",
   "metadata": {
    "papermill": {},
    "tags": []
   },
   "outputs": [],
   "source": [
    "ec.viz() #shows .nt metadata from urn, can use for (rdf)xml as well "
   ]
  }
 ],
 "metadata": {
  "celltoolbar": "Tags",
  "kernelspec": {
   "display_name": "Python 3",
   "language": "python",
   "name": "python3"
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  "language_info": {
   "codemirror_mode": {
    "name": "ipython",
    "version": 3
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   "file_extension": ".py",
   "mimetype": "text/x-python",
   "name": "python",
   "nbconvert_exporter": "python",
   "pygments_lexer": "ipython3",
   "version": "3.8.10"
  },
  "papermill": {
   "default_parameters": {},
   "environment_variables": {},
   "input_path": "/app/templates/template.ipynb",
   "output_path": "/tmp/http:www.earthchem.orglibrarybrowseviewid=1472.ipynb",
   "parameters": {
    "ext": "application/vnd.ms-excel",
    "q": null,
    "url": "http://www.earthchem.org/library/browse/view?id=1472",
    "urn": "urn:gleaner:summoned:iedadata:ba30bda189c8a02c0dcc491b0e408779e48834b2"
   },
   "version": "2.4.0"
  }
 },
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}