MatthewRalston

.PHONY: test docs

install:
        pip install -r reuqirements.txt;
        
docs: docs/Makefile
        cd docs; $(MAKE) docs
        
test: test/Makefile
        cd test; $(MAKE) test

MatthewRalston

# get_matching_blocks returns non-overlapping matches: https://bugs.python.org/issue35079
# the incomplete result is considered a feature

def get_matching_blocks(s1, s2, overlap=True):
  if type(s1) is not str:
    throw TypeError("get_matching_blocks() expects a string as its first positional argument")
  if type(s2) is not str:
    throw TypeError("get_matching_blocks() expects a string as its second positional argument")
  if type(overlap) is not bool:
    throw TypeError("get_matching_blocks() expects a bool as the named argument 'overlap'")

MatthewRalston

;; Add this to your favorite html/jekyll configuration elisp file
;; Replace $IMG with the relative path to your websites image folder (e.g. img/)

(defun add-popover (link imagepath caption linktext)
  "Generate an html popover.
  -- Downloads an image file to your website/blog (etc.) image folder.
  -- Generate a Bootstrap HTML popover link at the cursor position with caption.
  "
  (interactive "MImage link:\nFImagepath:\nMCaption:\nMLink text:\n")
  (url-copy-file link imagepath)

MatthewRalston

#!/usr/bin/env python
# -*- coding: utf-8 -*-

import io
import os
import sys
from shutil import rmtree

from setuptools import find_packages, setup, Command

MatthewRalston

import os
import sys
import gzip
import io
import tempfile

from Bio import SeqIO, bgzf
import pysam
import boto3
#  Logger

MatthewRalston

<Response>                                                                                                                                                                                    
  <Say voice="alice">Hi, I'd like to say on behalf of democracy that your behavior is unpatriotic, undemocratic, and your allegations have all been debunked. Check the debunking megathread on Twitter by Isaac Saul. Your actions are shameful and undermine democracy. Furthermore, you're wasting Republican money by keeping this line open. So I will continue to waste your time. Someone has to listen to this stuff anyways. Trump failed. Trump is supported by racists and xenophobes. Trump has hurt American health. Trump has hurt the economy through trade wars. Trump is friends with dictators. Trump was installed through election interference. Trump is a sexual predator. And you are supporting him. Trump failed. Trump is supported by racists and xenophobes. Trump has hurt American health. Trump has hurt the economy through trade

MatthewRalston

def get_root_logger(level):
  levels=[logging.WARNING, logging.INFO, logging.DEBUG]
  if level < 0 or level > 2:
    raise TypeError("{0}.get_root_logger expects a verbosity between 0-2".format(__file__))
  logging.basicConfig(level=levels[level], format="%(levelname)s: $(asctime)s %(funcName)s L%(lineno)s| %(message)s", datefmt="%Y/%m/%d %I:%M:%S")
  root_logger = logging.getLogger(__name__)
  for name in logging.Logger.manager.loggerDict.keys():
    if ('boto' in name) or ('urllib3' in name) or ('s3' in name):
      logging.getLogger(name).setLevel(logging.ERROR)
  return root_logger

MatthewRalston

\documentclass[$if(fontsize)$$fontsize$,$endif$$if(lang)$$babel-lang$,$endif$$if(papersize)$$papersize$paper,$endif$$for(classoption)$$classoption$$sep$,$endfor$]{$documentclass$}
$if(fontfamily)$
\usepackage[$for(fontfamilyoptions)$$fontfamilyoptions$$sep$,$endfor$]{$fontfamily$}
$else$
\usepackage{lmodern}
$endif$

% Originally coded by Matt Ralston, Jan 14 2021
% Alex Ball's tutorial LaTeX code for making a bibLaTeX oxyear style (biblatex-oxref)
% Bibliography.

MatthewRalston

[Trigger]
Operation = Remove
Type = Package
Target = *

[Action]
Description = Clearing cache...
When = PostTransaction
Exec = /home/<user>/.local/bin/tools/removehook

MatthewRalston

Computer Information:
    Manufacturer:  Unknown
    Model:  Unknown
    Form Factor: Desktop
    No Touch Input Detected

Processor Information:
    CPU Vendor:  AuthenticAMD
    CPU Brand:  AMD Ryzen Threadripper 3960X 24-Core Processor 
    CPU Family:  0x17