ZGainsforth

ZGainsforth

#1/5/2022   Michael Ofengenden & Roger Yu & A LOT A LOT of help from Zack Gainsforth
import sys, os
import hyperspy.api as hs
import numpy as np
import warnings
with warnings.catch_warnings():
    warnings.simplefilter("ignore")
    import tifffile as tif
import skimage
from skimage.transform import resize

ZGainsforth

import streamlit as st
import numpy as np
import matplotlib.pyplot as plt
import os, sys
from scipy.ndimage.filters import gaussian_filter1d
from scipy.interpolate import interp1d

def ConvolveGaussian(Eraw, Iraw, Sigma):
    E = np.linspace(Eraw[0], Eraw[-1], 10000)
    dE = E[1] - E[0]

ZGainsforth

import numpy as np
import matplotlib.pyplot as plt
from scipy.signal import medfilt, convolve
from scipy.signal.windows import gaussian
import os, sys

SpectraPath = os.path.join(".")

SpectraFiles = {
                "Top Crystal"     :     os.path.join(SpectraPath, "Top Crystal.txt"),

ZGainsforth

ZGainsforth

# Created 2015, Zack Gainsforth
import matplotlib
import matplotlib.pyplot as plt
import numpy as np
import struct
from numpy.fft import fft, fftfreq

def LoadSPAInterferogram(FileName):

    # Open the SPA file.

ZGainsforth

ZGainsforth

ZGainsforth

ZGainsforth

How to compile quantum espresso on mac or linux.

Disable anaconda during compilation.

On mac install macports version of gnu compilers: gcc-7 and gfortran-7
On linux install gnu compilers.

Install blas, fftw, mpich.

On OS X macports won't overwrite clang.  Stupid, but just put the macports compilers earlier in the path.