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boegel/R-3.3.0-foss-2016a_partial.log

Created June 3, 2016 23:15
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(partial) EasyBuild log for failed build of /local/585950[3079].master19.golett.gent.vsc/eb-IcDEXQ/files_pr3079/R/R-3.3.0-foss-2016a.eb (PR #3079)
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R-3.3.0-foss-2016a_partial.log
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ZeroMQ/4.1.4-intel-2016a
zlib/1.2.8
zlib/1.2.8-foss-2015a
zlib/1.2.8-foss-2015b
zlib/1.2.8-foss-2016a
zlib/1.2.8-GCC-4.9.2-binutils-2.25
zlib/1.2.8-GCC-4.9.3-binutils-2.25
zlib/1.2.8-GCCcore-4.9.3
zlib/1.2.8-GCCcore-5.3.0
zlib/1.2.8-GCCcore-5.4.0
zlib/1.2.8-intel-2015a
zlib/1.2.8-intel-2016a
zlibbioc/1.18.0-intel-2016a-R-3.2.3
/etc/modulefiles/vsc:
cluster/delcatty
cluster/golett(default)
cluster/phanpy
cluster/raichu
cluster/swalot
software/legacy/gastly_SL5
software/legacy/gengar
software/legacy/haunter_SL5
== 2016-06-04 01:10:04,168 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from [''] to []
== 2016-06-04 01:10:04,168 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:04,176 modules.py:414 DEBUG 'module available ' gave 867 answers: ['ABINIT/7.10.5-intel-2016.02-GCC-4.9', 'ABINIT/7.10.5-intel-2016.02-GCC-4.9_libxc', 'ABySS/1.9.0-foss-2016a', 'ADF/2014.11.r48287-intel-2016a', 'AFNI/20160329-intel-2016a-Python-2.7.11', 'ALPS/2.2.b4-intel-2016a-Python-2.7.11', 'ANTLR/2.7.7-foss-2016a-Python-2.7.11', 'ASE/3.9.1.4567-intel-2016a-Python-2.7.11', 'ATK/2.18.0-intel-2016a', 'ATK/2.20.0-intel-2016a', 'Autoconf/2.69', 'Autoconf/2.69-GCC-4.9.2', 'Autoconf/2.69-GCC-4.9.3-2.25', 'Autoconf/2.69-GNU-4.9.3-2.25', 'Autoconf/2.69-foss-2015a', 'Autoconf/2.69-foss-2016a', 'Autoconf/2.69-intel-2016a', 'Automake/1.14-intel-2016a', 'Automake/1.15', 'Automake/1.15-GCC-4.9.2', 'Automake/1.15-GCC-4.9.3-2.25', 'Automake/1.15-GNU-4.9.3-2.25', 'Automake/1.15-foss-2015a', 'Automake/1.15-foss-2016a', 'Automake/1.15-intel-2016a', 'Autotools/20150215', 'Autotools/20150215-GCC-4.9.2', 'Autotools/20150215-GCC-4.9.3-2.25', 'Autotools/20150215-GNU-4.9.3-2.25', 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== 2016-06-04 01:10:04,177 modules.py:418 DEBUG Cached result for 'module avail' with key '('MODULEPATH=/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc', 'modulecmd', '')': ['ABINIT/7.10.5-intel-2016.02-GCC-4.9', 'ABINIT/7.10.5-intel-2016.02-GCC-4.9_libxc', 'ABySS/1.9.0-foss-2016a', 'ADF/2014.11.r48287-intel-2016a', 'AFNI/20160329-intel-2016a-Python-2.7.11', 'ALPS/2.2.b4-intel-2016a-Python-2.7.11', 'ANTLR/2.7.7-foss-2016a-Python-2.7.11', 'ASE/3.9.1.4567-intel-2016a-Python-2.7.11', 'ATK/2.18.0-intel-2016a', 'ATK/2.20.0-intel-2016a', 'Autoconf/2.69', 'Autoconf/2.69-GCC-4.9.2', 'Autoconf/2.69-GCC-4.9.3-2.25', 'Autoconf/2.69-GNU-4.9.3-2.25', 'Autoconf/2.69-foss-2015a', 'Autoconf/2.69-foss-2016a', 'Autoconf/2.69-intel-2016a', 'Automake/1.14-intel-2016a', 'Automake/1.15', 'Automake/1.15-GCC-4.9.2', 'Automake/1.15-GCC-4.9.3-2.25', 'Automake/1.15-GNU-4.9.3-2.25', 'Automake/1.15-foss-2015a', 'Automake/1.15-foss-2016a', 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'matplotlib/1.5.1-intel-2016a-Python-2.7.11', 'matplotlib/1.5.1-intel-2016a-Python-2.7.11-freetype-2.6.3', 'matplotlib/1.5.1-intel-2016a-Python-3.5.1', 'mayavi/4.4.4-intel-2016a-Python-2.7.11', 'minieigen/0.5.3-intel-2016a-Python-2.7.11', 'molmod/1.1-intel-2016a-Python-2.7.11', 'motif/2.3.5-intel-2016a', 'mpi4py/1.3.1-intel-2016a-Python-2.7.11-timed-pingpong', 'mpmath/0.19-foss-2016a-Python-2.7.11', 'mutil/1.822.3-intel-2016a', 'mympingpong/0.7.0-intel-2016a-Python-2.7.11', 'mysqlclient/1.3.7-intel-2016a-Python-2.7.11', 'ncbi-vdb/2.5.8-1-intel-2016a', 'ncurses/5.9-intel-2015a', 'ncurses/6.0', 'ncurses/6.0-foss-2016a', 'ncurses/6.0-intel-2016a', 'netCDF-C++/4.2-foss-2016a', 'netCDF-C++4/4.3.0-intel-2016a', 'netCDF-Fortran/4.4.3-foss-2016a', 'netCDF-Fortran/4.4.3-intel-2016a', 'netCDF-Fortran/4.4.4-intel-2016a', 'netCDF/4.3.3.1-foss-2016a', 'netCDF/4.3.3.1-intel-2016a', 'netCDF/4.4.0-foss-2016a', 'netCDF/4.4.0-intel-2016a', 'nettle/3.1.1-foss-2016a', 'nettle/3.1.1-intel-2016a', 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== 2016-06-04 01:10:04,178 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,178 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'libreadline/6.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libreadline', 'dummy': False, 'short_mod_name': 'libreadline/6.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.3', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,179 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,179 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'ncurses/6.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'ncurses', 'dummy': False, 'short_mod_name': 'ncurses/6.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.0', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,179 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,179 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'libpng/1.6.21-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libpng', 'dummy': False, 'short_mod_name': 'libpng/1.6.21-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.6.21', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,179 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,179 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libjpeg-turbo', 'dummy': False, 'short_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.4.2', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,179 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,179 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.0.6', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,179 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,180 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'Java/1.8.0_92', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Java', 'dummy': True, 'short_mod_name': 'Java/1.8.0_92', 'external_module': False, 'versionsuffix': '', 'version': '1.8.0_92', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,180 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,180 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'Tcl/8.6.5-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tcl', 'dummy': False, 'short_mod_name': 'Tcl/8.6.5-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '8.6.5', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,180 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,180 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tk', 'dummy': False, 'short_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'external_module': False, 'versionsuffix': '-libX11-1.6.3', 'version': '8.6.5', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,180 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,180 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'cURL/7.47.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cURL', 'dummy': False, 'short_mod_name': 'cURL/7.47.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '7.47.0', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,180 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,180 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'libxml2/2.9.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libxml2', 'dummy': False, 'short_mod_name': 'libxml2/2.9.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.9.3', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,181 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,181 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'GDAL/2.1.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'GDAL', 'dummy': False, 'short_mod_name': 'GDAL/2.1.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.1.0', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,181 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,181 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'PROJ/4.9.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'PROJ', 'dummy': False, 'short_mod_name': 'PROJ/4.9.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.9.2', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,181 toolchain.py:376 DEBUG add_dependencies: MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,181 toolchain.py:379 DEBUG add_dependencies: added toolchain dependency {'external_module_metadata': {}, 'full_mod_name': 'cairo/1.14.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cairo', 'dummy': False, 'short_mod_name': 'cairo/1.14.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.14.6', 'hidden': False, 'build_only': False}
== 2016-06-04 01:10:04,182 easyconfig.py:594 DEBUG Dependencies BEFORE filtering: [{'external_module_metadata': {}, 'full_mod_name': 'libreadline/6.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libreadline', 'dummy': False, 'short_mod_name': 'libreadline/6.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'ncurses/6.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'ncurses', 'dummy': False, 'short_mod_name': 'ncurses/6.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libpng/1.6.21-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libpng', 'dummy': False, 'short_mod_name': 'libpng/1.6.21-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.6.21', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libjpeg-turbo', 'dummy': False, 'short_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.4.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.0.6', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Java/1.8.0_92', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Java', 'dummy': True, 'short_mod_name': 'Java/1.8.0_92', 'external_module': False, 'versionsuffix': '', 'version': '1.8.0_92', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tcl/8.6.5-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tcl', 'dummy': False, 'short_mod_name': 'Tcl/8.6.5-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tk', 'dummy': False, 'short_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'external_module': False, 'versionsuffix': '-libX11-1.6.3', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cURL/7.47.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cURL', 'dummy': False, 'short_mod_name': 'cURL/7.47.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '7.47.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libxml2/2.9.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libxml2', 'dummy': False, 'short_mod_name': 'libxml2/2.9.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.9.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'GDAL/2.1.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'GDAL', 'dummy': False, 'short_mod_name': 'GDAL/2.1.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.1.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'PROJ/4.9.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'PROJ', 'dummy': False, 'short_mod_name': 'PROJ/4.9.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.9.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cairo/1.14.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cairo', 'dummy': False, 'short_mod_name': 'cairo/1.14.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.14.6', 'hidden': False, 'build_only': False}]
== 2016-06-04 01:10:04,183 easyblock.py:2133 INFO Running method make_builddir part of step ready
== 2016-06-04 01:10:04,183 easyblock.py:756 DEBUG Creating the build directory /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a (cleanup: True)
== 2016-06-04 01:10:04,183 filetools.py:905 INFO Creating directory /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a (parents: True, set_gid: False, sticky: False)
== 2016-06-04 01:10:04,183 easyblock.py:2133 INFO Running method env_reset_changes part of step ready
== 2016-06-04 01:10:04,183 easyblock.py:2133 INFO Running method handle_iterate_opts part of step ready
== 2016-06-04 01:10:04,184 easyblock.py:2122 DEBUG Not skipping source step (skippable: True, skip: None, skipsteps: [], module_only: False, force: True
== 2016-06-04 01:10:04,184 build_log.py:227 INFO unpacking...
== 2016-06-04 01:10:04,184 easyblock.py:2130 INFO Starting source step
== 2016-06-04 01:10:04,187 templates.py:149 DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'configure_cmd_prefix': ['', 'Prefix to be glued before ./configure', (1, 'easyblock-specific')], 'postinstallcmds': [[], 'Commands to run after the install step.', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tar.gz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'modaltsoftname': [None, 'Module name to use (rather than using software name', (8, 'modules')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'hiddendependencies': [[], 'List of dependencies available as hidden modules', (5, 'dependencies')], 'checksums': [[], 'Checksums for sources and patches', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': ['', 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'prebuildopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['3.3.0', 'Version of software', (0, 'mandatory')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'modaliases': [{}, 'Aliases to be defined in module file', (8, 'modules')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[('openssl-devel', 'libssl-dev', 'libopenssl-devel')], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'modluafooter': ['', 'Footer to include in generated module file (Lua syntax)', (8, 'modules')], 'homepage': ['http://www.r-project.org/', 'The homepage of the software', (0, 'mandatory')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'buildopts': ['', 'Extra options passed to make step (default already has -j X)', (3, 'build')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['R is a free software environment for statistical computing and graphics.', 'A short description of the software', (0, 'mandatory')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')], 'exts_list': [['base', 'datasets', 'graphics', 'grDevices', 'grid', 'methods', 'parallel', 'splines', 'stats', 'stats4', 'tools', 'utils', ('Rmpi', '0.6-5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('abind', '1.4-3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('magic', '1.5-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('geometry', '0.3-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bit', '1.1-12', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('filehash', '2.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ff', '2.2-13', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bnlearn', '4.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bootstrap', '2015.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('combinat', '0.0-8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('deal', '1.2-37', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('fdrtool', '1.2.15', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('formatR', '1.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('gtools', '3.5.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('gdata', '2.17.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('GSA', '1.03', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('highr', '0.6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('infotheo', '1.2.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('lars', '1.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('lazy', '1.2-15', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('kernlab', '0.9-24', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mime', '0.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('markdown', '0.7.7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mlbench', '2.1-1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('NLP', '0.1-9', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mclust', '5.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('RANN', '2.5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('rmeta', '2.16', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('segmented', '0.5-1.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('som', '0.3-5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('SuppDists', '1.1-9.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('stabledist', '0.7-0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('survivalROC', '1.0.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('pspline', '1.0-17', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('timeDate', '3012.100', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('longmemo', '1.0-0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ADGofTest', '0.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ade4', '1.7-4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('AlgDesign', '1.1-7.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('base64enc', '0.1-3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': 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{'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('rstudioapi', '0.5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('roxygen2', '5.0.1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('git2r', '0.15.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('rversions', '1.0.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('withr', '1.0.1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('devtools', '1.11.1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('Rook', '1.1-1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('Cairo', '1.5-9', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('RMTstat', '0.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('Lmoments', '1.2-3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('distillery', '1.0-2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('extRemes', '2.0-7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('pixmap', '0.4-11', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('tkrplot', '0.0-23', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('misc3d', '0.8-4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('multicool', '0.1-9', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ks', '1.10.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('logcondens', '2.1.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('Iso', '0.0-17', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('penalized', '0.9-46', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('clusterRepro', '0.5-1.1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('randomForestSRC', '2.2.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sm', '2.2-5.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('psych', '1.6.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('pbivnorm', '0.6.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('lavaan', '0.5-20', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('matrixcalc', '1.0-3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('arm', '1.8-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mi', '1.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('htmlwidgets', '0.6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('visNetwork', '1.0.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('DiagrammeR', '0.8.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sem', '3.1-7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('jpeg', '0.1-8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sna', '2.3-2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('glasso', '1.8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('huge', '1.2.7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('d3Network', '0.5.2.1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ggm', '2.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('qgraph', '1.3.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('diveRsity', '1.9.89', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('doSNOW', '1.0.14', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('phangorn', '2.0.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']})], 'List with extensions added to the base installation', (7, 'extensions')], 'docurls': [None, 'List of urls with documentation of the software (not necessarily on homepage)', (0, 'mandatory')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[{'external_module_metadata': {}, 'full_mod_name': 'libreadline/6.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libreadline', 'dummy': False, 'short_mod_name': 'libreadline/6.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'ncurses/6.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'ncurses', 'dummy': False, 'short_mod_name': 'ncurses/6.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libpng/1.6.21-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libpng', 'dummy': False, 'short_mod_name': 'libpng/1.6.21-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.6.21', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libjpeg-turbo', 'dummy': False, 'short_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.4.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.0.6', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Java/1.8.0_92', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Java', 'dummy': True, 'short_mod_name': 'Java/1.8.0_92', 'external_module': False, 'versionsuffix': '', 'version': '1.8.0_92', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tcl/8.6.5-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tcl', 'dummy': False, 'short_mod_name': 'Tcl/8.6.5-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tk', 'dummy': False, 'short_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'external_module': False, 'versionsuffix': '-libX11-1.6.3', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cURL/7.47.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cURL', 'dummy': False, 'short_mod_name': 'cURL/7.47.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '7.47.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libxml2/2.9.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libxml2', 'dummy': False, 'short_mod_name': 'libxml2/2.9.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.9.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'GDAL/2.1.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'GDAL', 'dummy': False, 'short_mod_name': 'GDAL/2.1.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.1.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'PROJ/4.9.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'PROJ', 'dummy': False, 'short_mod_name': 'PROJ/4.9.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.9.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cairo/1.14.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cairo', 'dummy': False, 'short_mod_name': 'cairo/1.14.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.14.6', 'hidden': False, 'build_only': False}], 'List of dependencies', (5, 'dependencies')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'key': [None, 'Key for installing software', (6, 'license')], 'include_modpath_extensions': [True, 'Include $MODULEPATH extensions specified by module naming scheme.', (8, 'modules')], 'prefix_opt': [None, "Prefix command line option for configure script ('--prefix=' if None)", (1, 'easyblock-specific')], 'modloadmsg': [{}, 'Message that should be printed when generated module is loaded', (8, 'modules')], 'modtclfooter': ['', 'Footer to include in generated module file (Tcl syntax)', (8, 'modules')], 'parallel': [24, 'Degree of parallelism for e.g. make (default: based on the number of cores, active cpuset and restrictions in ulimit)', (3, 'build')], 'buildininstalldir': [False, 'Boolean to build (True) or not build (False) in the installation directory', (4, 'file-management')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'buildstats': [None, 'A list of dicts with build statistics', (9, 'other')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['R', 'Name of software', (0, 'mandatory')], 'recursive_module_unload': [False, 'Recursive unload of all dependencies when unloading module', (8, 'modules')], 'toolchain': [{'version': '2016a', 'name': 'foss'}, 'Name and version of toolchain', (0, 'mandatory')], 'preconfigopts': ['BLAS_LIBS="$LIBBLAS" LAPACK_LIBS="$LIBLAPACK"', 'Extra options pre-passed to configure.', (3, 'build')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'source_urls': [['http://cran.us.r-project.org/src/base/R-%(version_major)s'], 'List of URLs for source files', (3, 'build')], 'easyblock': [None, 'EasyBlock to use for building; if set to None, an easyblock is selected based on the software name', (3, 'build')], 'whatis': [None, 'List of brief (one line) package description entries', (8, 'modules')], 'software_license': [None, 'Software license', (0, 'mandatory')], 'configopts': ['--with-lapack --with-blas --with-pic --enable-threads --enable-R-shlib --with-tcltk --with-x --with-tcl-config=$EBROOTTCL/lib/tclConfig.sh --with-tk-config=$EBROOTTK/lib/tkConfig.sh --with-cairo --with-libpng --with-jpeglib --with-libtiff --with-recommended-packages=no', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'software_license_urls': [None, 'List of software license locations', (0, 'mandatory')]}
== 2016-06-04 01:10:04,194 templates.py:173 DEBUG version found in easyconfig is 3.3.0
== 2016-06-04 01:10:04,194 templates.py:210 DEBUG name: name, config: R
== 2016-06-04 01:10:04,194 templates.py:210 DEBUG name: version, config: 3.3.0
== 2016-06-04 01:10:04,194 templates.py:210 DEBUG name: versionsuffix, config:
== 2016-06-04 01:10:04,194 templates.py:210 DEBUG name: versionprefix, config:
== 2016-06-04 01:10:04,198 templates.py:149 DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'configure_cmd_prefix': ['', 'Prefix to be glued before ./configure', (1, 'easyblock-specific')], 'postinstallcmds': [[], 'Commands to run after the install step.', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tar.gz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'modaltsoftname': [None, 'Module name to use (rather than using software name', (8, 'modules')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'hiddendependencies': [[], 'List of dependencies available as hidden modules', (5, 'dependencies')], 'checksums': [[], 'Checksums for sources and patches', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': ['', 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'prebuildopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['3.3.0', 'Version of software', (0, 'mandatory')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'modaliases': [{}, 'Aliases to be defined in module file', (8, 'modules')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[('openssl-devel', 'libssl-dev', 'libopenssl-devel')], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'modluafooter': ['', 'Footer to include in generated module file (Lua syntax)', (8, 'modules')], 'homepage': ['http://www.r-project.org/', 'The homepage of the software', (0, 'mandatory')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'buildopts': ['', 'Extra options passed to make step (default already has -j X)', (3, 'build')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['R is a free software environment for statistical computing and graphics.', 'A short description of the software', (0, 'mandatory')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')], 'exts_list': [['base', 'datasets', 'graphics', 'grDevices', 'grid', 'methods', 'parallel', 'splines', 'stats', 'stats4', 'tools', 'utils', ('Rmpi', '0.6-5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('abind', '1.4-3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('magic', '1.5-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('geometry', '0.3-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bit', '1.1-12', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('filehash', '2.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ff', '2.2-13', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bnlearn', '4.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bootstrap', '2015.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('combinat', '0.0-8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('deal', '1.2-37', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('fdrtool', '1.2.15', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('formatR', '1.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('gtools', '3.5.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('gdata', '2.17.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('GSA', '1.03', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('highr', '0.6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('infotheo', '1.2.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('lars', '1.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('lazy', '1.2-15', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('kernlab', '0.9-24', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mime', '0.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('markdown', '0.7.7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mlbench', '2.1-1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('NLP', '0.1-9', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mclust', '5.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('RANN', '2.5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('rmeta', '2.16', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('segmented', '0.5-1.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('som', '0.3-5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('SuppDists', '1.1-9.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('stabledist', '0.7-0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('survivalROC', '1.0.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('pspline', '1.0-17', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('timeDate', '3012.100', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('longmemo', '1.0-0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 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['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('BH', '1.60.0-2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('brew', '1.0-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('Brobdingnag', '1.2-4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('corpcor', '1.6.8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('longitudinal', '1.1.12', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('stringi', '1.0-1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('backports', '1.0.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('checkmate', '1.7.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('cubature', '1.1-2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('DEoptimR', '1.0-4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('digest', '0.6.9', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('fastmatch', '1.0-4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ffbase', '0.12.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('iterators', '1.0.8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('maps', '3.1.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('nnls', '1.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sendmailR', '1.2-1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('spam', '1.3-0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('subplex', '1.1-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('magrittr', '1.5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('stringr', '1.0.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 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{'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('logcondens', '2.1.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('Iso', '0.0-17', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('penalized', '0.9-46', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('clusterRepro', '0.5-1.1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('randomForestSRC', '2.2.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sm', '2.2-5.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('psych', '1.6.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('pbivnorm', '0.6.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('lavaan', '0.5-20', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('matrixcalc', '1.0-3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('arm', '1.8-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mi', '1.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('htmlwidgets', '0.6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('visNetwork', '1.0.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('DiagrammeR', '0.8.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sem', '3.1-7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('jpeg', '0.1-8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sna', '2.3-2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('glasso', '1.8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('huge', '1.2.7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('d3Network', '0.5.2.1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ggm', '2.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('qgraph', '1.3.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('diveRsity', '1.9.89', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('doSNOW', '1.0.14', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('phangorn', '2.0.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']})], 'List with extensions added to the base installation', (7, 'extensions')], 'docurls': [None, 'List of urls with documentation of the software (not necessarily on homepage)', (0, 'mandatory')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[{'external_module_metadata': {}, 'full_mod_name': 'libreadline/6.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libreadline', 'dummy': False, 'short_mod_name': 'libreadline/6.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'ncurses/6.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'ncurses', 'dummy': False, 'short_mod_name': 'ncurses/6.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libpng/1.6.21-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libpng', 'dummy': False, 'short_mod_name': 'libpng/1.6.21-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.6.21', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libjpeg-turbo', 'dummy': False, 'short_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.4.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.0.6', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Java/1.8.0_92', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Java', 'dummy': True, 'short_mod_name': 'Java/1.8.0_92', 'external_module': False, 'versionsuffix': '', 'version': '1.8.0_92', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tcl/8.6.5-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tcl', 'dummy': False, 'short_mod_name': 'Tcl/8.6.5-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tk', 'dummy': False, 'short_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'external_module': False, 'versionsuffix': '-libX11-1.6.3', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cURL/7.47.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cURL', 'dummy': False, 'short_mod_name': 'cURL/7.47.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '7.47.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libxml2/2.9.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libxml2', 'dummy': False, 'short_mod_name': 'libxml2/2.9.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.9.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'GDAL/2.1.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'GDAL', 'dummy': False, 'short_mod_name': 'GDAL/2.1.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.1.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'PROJ/4.9.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'PROJ', 'dummy': False, 'short_mod_name': 'PROJ/4.9.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.9.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cairo/1.14.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cairo', 'dummy': False, 'short_mod_name': 'cairo/1.14.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.14.6', 'hidden': False, 'build_only': False}], 'List of dependencies', (5, 'dependencies')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'key': [None, 'Key for installing software', (6, 'license')], 'include_modpath_extensions': [True, 'Include $MODULEPATH extensions specified by module naming scheme.', (8, 'modules')], 'prefix_opt': [None, "Prefix command line option for configure script ('--prefix=' if None)", (1, 'easyblock-specific')], 'modloadmsg': [{}, 'Message that should be printed when generated module is loaded', (8, 'modules')], 'modtclfooter': ['', 'Footer to include in generated module file (Tcl syntax)', (8, 'modules')], 'parallel': [24, 'Degree of parallelism for e.g. make (default: based on the number of cores, active cpuset and restrictions in ulimit)', (3, 'build')], 'buildininstalldir': [False, 'Boolean to build (True) or not build (False) in the installation directory', (4, 'file-management')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'buildstats': [None, 'A list of dicts with build statistics', (9, 'other')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['R', 'Name of software', (0, 'mandatory')], 'recursive_module_unload': [False, 'Recursive unload of all dependencies when unloading module', (8, 'modules')], 'toolchain': [{'version': '2016a', 'name': 'foss'}, 'Name and version of toolchain', (0, 'mandatory')], 'preconfigopts': ['BLAS_LIBS="$LIBBLAS" LAPACK_LIBS="$LIBLAPACK"', 'Extra options pre-passed to configure.', (3, 'build')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'source_urls': [['http://cran.us.r-project.org/src/base/R-%(version_major)s'], 'List of URLs for source files', (3, 'build')], 'easyblock': [None, 'EasyBlock to use for building; if set to None, an easyblock is selected based on the software name', (3, 'build')], 'whatis': [None, 'List of brief (one line) package description entries', (8, 'modules')], 'software_license': [None, 'Software license', (0, 'mandatory')], 'configopts': ['--with-lapack --with-blas --with-pic --enable-threads --enable-R-shlib --with-tcltk --with-x --with-tcl-config=$EBROOTTCL/lib/tclConfig.sh --with-tk-config=$EBROOTTK/lib/tkConfig.sh --with-cairo --with-libpng --with-jpeglib --with-libtiff --with-recommended-packages=no', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'software_license_urls': [None, 'List of software license locations', (0, 'mandatory')]}
== 2016-06-04 01:10:04,204 templates.py:173 DEBUG version found in easyconfig is 3.3.0
== 2016-06-04 01:10:04,204 templates.py:210 DEBUG name: name, config: R
== 2016-06-04 01:10:04,204 templates.py:210 DEBUG name: version, config: 3.3.0
== 2016-06-04 01:10:04,204 templates.py:210 DEBUG name: versionsuffix, config:
== 2016-06-04 01:10:04,205 templates.py:210 DEBUG name: versionprefix, config:
== 2016-06-04 01:10:04,205 easyblock.py:2133 INFO Running method checksum_step part of step source
== 2016-06-04 01:10:04,205 easyblock.py:1491 INFO Checksum verification for /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/R-3.3.0.tar.gz using None passed.
== 2016-06-04 01:10:04,205 easyblock.py:2133 INFO Running method extract_step part of step source
== 2016-06-04 01:10:04,205 easyblock.py:1498 INFO Unpacking source R-3.3.0.tar.gz
== 2016-06-04 01:10:04,206 filetools.py:933 DEBUG Not creating existing path /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a
== 2016-06-04 01:10:04,206 filetools.py:189 DEBUG Unpacking /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/R-3.3.0.tar.gz in directory /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a.
== 2016-06-04 01:10:04,206 run.py:99 DEBUG run_cmd: running cmd tar xzf /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/R-3.3.0.tar.gz (in /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a)
== 2016-06-04 01:10:04,784 run.py:392 DEBUG cmd "tar xzf /user/data/gent/vsc400/vsc40023/EasyBuild/sources/r/R/R-3.3.0.tar.gz" exited with exitcode 0 and output:
== 2016-06-04 01:10:04,784 run.py:436 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w)
== 2016-06-04 01:10:04,784 filetools.py:544 DEBUG Last dir list ['ChangeLog', 'configure.ac', 'tests', 'COPYING', 'etc', 'po', 'm4', 'SVN-REVISION', 'src', 'tools', 'Makeconf.in', 'VERSION', 'VERSION-NICK', 'share', 'Makefile.in', 'configure', 'INSTALL', 'config.site', 'doc', 'README', 'Makefile.fw']
== 2016-06-04 01:10:04,784 filetools.py:545 DEBUG Possible new dir /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0 found
== 2016-06-04 01:10:04,784 easyblock.py:2122 DEBUG Not skipping patch step (skippable: True, skip: None, skipsteps: [], module_only: False, force: True
== 2016-06-04 01:10:04,785 build_log.py:227 INFO patching...
== 2016-06-04 01:10:04,785 easyblock.py:2130 INFO Starting patch step
== 2016-06-04 01:10:04,788 templates.py:149 DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'configure_cmd_prefix': ['', 'Prefix to be glued before ./configure', (1, 'easyblock-specific')], 'postinstallcmds': [[], 'Commands to run after the install step.', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tar.gz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'modaltsoftname': [None, 'Module name to use (rather than using software name', (8, 'modules')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'hiddendependencies': [[], 'List of dependencies available as hidden modules', (5, 'dependencies')], 'checksums': [[], 'Checksums for sources and patches', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': ['', 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'prebuildopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['3.3.0', 'Version of software', (0, 'mandatory')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'modaliases': [{}, 'Aliases to be defined in module file', (8, 'modules')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[('openssl-devel', 'libssl-dev', 'libopenssl-devel')], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'modluafooter': ['', 'Footer to include in generated module file (Lua syntax)', (8, 'modules')], 'homepage': ['http://www.r-project.org/', 'The homepage of the software', (0, 'mandatory')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'buildopts': ['', 'Extra options passed to make step (default already has -j X)', (3, 'build')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['R is a free software environment for statistical computing and graphics.', 'A short description of the software', (0, 'mandatory')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')], 'exts_list': [['base', 'datasets', 'graphics', 'grDevices', 'grid', 'methods', 'parallel', 'splines', 'stats', 'stats4', 'tools', 'utils', ('Rmpi', '0.6-5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('abind', '1.4-3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('magic', '1.5-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('geometry', '0.3-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bit', '1.1-12', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('filehash', '2.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 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'http://cran.freestatistics.org/src/contrib']}), ('deal', '1.2-37', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('fdrtool', '1.2.15', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('formatR', '1.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('gtools', '3.5.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('gdata', '2.17.0', 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['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('lazy', '1.2-15', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('kernlab', '0.9-24', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mime', '0.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('markdown', '0.7.7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 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{'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('logcondens', '2.1.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('Iso', '0.0-17', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('penalized', '0.9-46', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('clusterRepro', '0.5-1.1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('randomForestSRC', '2.2.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sm', '2.2-5.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('psych', '1.6.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('pbivnorm', '0.6.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('lavaan', '0.5-20', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('matrixcalc', '1.0-3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('arm', '1.8-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mi', '1.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('htmlwidgets', '0.6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('visNetwork', '1.0.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('DiagrammeR', '0.8.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sem', '3.1-7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('jpeg', '0.1-8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sna', '2.3-2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('glasso', '1.8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('huge', '1.2.7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('d3Network', '0.5.2.1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ggm', '2.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('qgraph', '1.3.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('diveRsity', '1.9.89', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('doSNOW', '1.0.14', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('phangorn', '2.0.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']})], 'List with extensions added to the base installation', (7, 'extensions')], 'docurls': [None, 'List of urls with documentation of the software (not necessarily on homepage)', (0, 'mandatory')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[{'external_module_metadata': {}, 'full_mod_name': 'libreadline/6.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libreadline', 'dummy': False, 'short_mod_name': 'libreadline/6.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'ncurses/6.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'ncurses', 'dummy': False, 'short_mod_name': 'ncurses/6.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libpng/1.6.21-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libpng', 'dummy': False, 'short_mod_name': 'libpng/1.6.21-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.6.21', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libjpeg-turbo', 'dummy': False, 'short_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.4.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.0.6', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Java/1.8.0_92', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Java', 'dummy': True, 'short_mod_name': 'Java/1.8.0_92', 'external_module': False, 'versionsuffix': '', 'version': '1.8.0_92', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tcl/8.6.5-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tcl', 'dummy': False, 'short_mod_name': 'Tcl/8.6.5-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tk', 'dummy': False, 'short_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'external_module': False, 'versionsuffix': '-libX11-1.6.3', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cURL/7.47.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cURL', 'dummy': False, 'short_mod_name': 'cURL/7.47.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '7.47.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libxml2/2.9.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libxml2', 'dummy': False, 'short_mod_name': 'libxml2/2.9.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.9.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'GDAL/2.1.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'GDAL', 'dummy': False, 'short_mod_name': 'GDAL/2.1.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.1.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'PROJ/4.9.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'PROJ', 'dummy': False, 'short_mod_name': 'PROJ/4.9.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.9.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cairo/1.14.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cairo', 'dummy': False, 'short_mod_name': 'cairo/1.14.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.14.6', 'hidden': False, 'build_only': False}], 'List of dependencies', (5, 'dependencies')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'key': [None, 'Key for installing software', (6, 'license')], 'include_modpath_extensions': [True, 'Include $MODULEPATH extensions specified by module naming scheme.', (8, 'modules')], 'prefix_opt': [None, "Prefix command line option for configure script ('--prefix=' if None)", (1, 'easyblock-specific')], 'modloadmsg': [{}, 'Message that should be printed when generated module is loaded', (8, 'modules')], 'modtclfooter': ['', 'Footer to include in generated module file (Tcl syntax)', (8, 'modules')], 'parallel': [24, 'Degree of parallelism for e.g. make (default: based on the number of cores, active cpuset and restrictions in ulimit)', (3, 'build')], 'buildininstalldir': [False, 'Boolean to build (True) or not build (False) in the installation directory', (4, 'file-management')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'buildstats': [None, 'A list of dicts with build statistics', (9, 'other')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['R', 'Name of software', (0, 'mandatory')], 'recursive_module_unload': [False, 'Recursive unload of all dependencies when unloading module', (8, 'modules')], 'toolchain': [{'version': '2016a', 'name': 'foss'}, 'Name and version of toolchain', (0, 'mandatory')], 'preconfigopts': ['BLAS_LIBS="$LIBBLAS" LAPACK_LIBS="$LIBLAPACK"', 'Extra options pre-passed to configure.', (3, 'build')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'source_urls': [['http://cran.us.r-project.org/src/base/R-%(version_major)s'], 'List of URLs for source files', (3, 'build')], 'easyblock': [None, 'EasyBlock to use for building; if set to None, an easyblock is selected based on the software name', (3, 'build')], 'whatis': [None, 'List of brief (one line) package description entries', (8, 'modules')], 'software_license': [None, 'Software license', (0, 'mandatory')], 'configopts': ['--with-lapack --with-blas --with-pic --enable-threads --enable-R-shlib --with-tcltk --with-x --with-tcl-config=$EBROOTTCL/lib/tclConfig.sh --with-tk-config=$EBROOTTK/lib/tkConfig.sh --with-cairo --with-libpng --with-jpeglib --with-libtiff --with-recommended-packages=no', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'software_license_urls': [None, 'List of software license locations', (0, 'mandatory')]}
== 2016-06-04 01:10:04,795 templates.py:173 DEBUG version found in easyconfig is 3.3.0
== 2016-06-04 01:10:04,795 templates.py:210 DEBUG name: name, config: R
== 2016-06-04 01:10:04,795 templates.py:210 DEBUG name: version, config: 3.3.0
== 2016-06-04 01:10:04,795 templates.py:210 DEBUG name: versionsuffix, config:
== 2016-06-04 01:10:04,795 templates.py:210 DEBUG name: versionprefix, config:
== 2016-06-04 01:10:04,798 templates.py:149 DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'configure_cmd_prefix': ['', 'Prefix to be glued before ./configure', (1, 'easyblock-specific')], 'postinstallcmds': [[], 'Commands to run after the install step.', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tar.gz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'modaltsoftname': [None, 'Module name to use (rather than using software name', (8, 'modules')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'hiddendependencies': [[], 'List of dependencies available as hidden modules', (5, 'dependencies')], 'checksums': [[], 'Checksums for sources and patches', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': ['', 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'prebuildopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['3.3.0', 'Version of software', (0, 'mandatory')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'modaliases': [{}, 'Aliases to be defined in module file', (8, 'modules')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[('openssl-devel', 'libssl-dev', 'libopenssl-devel')], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'modluafooter': ['', 'Footer to include in generated module file (Lua syntax)', (8, 'modules')], 'homepage': ['http://www.r-project.org/', 'The homepage of the software', (0, 'mandatory')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. 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'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('htmlwidgets', '0.6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('visNetwork', '1.0.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('DiagrammeR', '0.8.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sem', '3.1-7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('jpeg', '0.1-8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('sna', '2.3-2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('glasso', '1.8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('huge', '1.2.7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('d3Network', '0.5.2.1', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ggm', '2.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('qgraph', '1.3.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('diveRsity', '1.9.89', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('doSNOW', '1.0.14', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('phangorn', '2.0.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']})], 'List with extensions added to the base installation', (7, 'extensions')], 'docurls': [None, 'List of urls with documentation of the software (not necessarily on homepage)', (0, 'mandatory')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[{'external_module_metadata': {}, 'full_mod_name': 'libreadline/6.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libreadline', 'dummy': False, 'short_mod_name': 'libreadline/6.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'ncurses/6.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'ncurses', 'dummy': False, 'short_mod_name': 'ncurses/6.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libpng/1.6.21-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libpng', 'dummy': False, 'short_mod_name': 'libpng/1.6.21-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.6.21', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libjpeg-turbo', 'dummy': False, 'short_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.4.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.0.6', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Java/1.8.0_92', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Java', 'dummy': True, 'short_mod_name': 'Java/1.8.0_92', 'external_module': False, 'versionsuffix': '', 'version': '1.8.0_92', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tcl/8.6.5-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tcl', 'dummy': False, 'short_mod_name': 'Tcl/8.6.5-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tk', 'dummy': False, 'short_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'external_module': False, 'versionsuffix': '-libX11-1.6.3', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cURL/7.47.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cURL', 'dummy': False, 'short_mod_name': 'cURL/7.47.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '7.47.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libxml2/2.9.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libxml2', 'dummy': False, 'short_mod_name': 'libxml2/2.9.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.9.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'GDAL/2.1.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'GDAL', 'dummy': False, 'short_mod_name': 'GDAL/2.1.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.1.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'PROJ/4.9.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'PROJ', 'dummy': False, 'short_mod_name': 'PROJ/4.9.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.9.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cairo/1.14.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cairo', 'dummy': False, 'short_mod_name': 'cairo/1.14.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.14.6', 'hidden': False, 'build_only': False}], 'List of dependencies', (5, 'dependencies')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'key': [None, 'Key for installing software', (6, 'license')], 'include_modpath_extensions': [True, 'Include $MODULEPATH extensions specified by module naming scheme.', (8, 'modules')], 'prefix_opt': [None, "Prefix command line option for configure script ('--prefix=' if None)", (1, 'easyblock-specific')], 'modloadmsg': [{}, 'Message that should be printed when generated module is loaded', (8, 'modules')], 'modtclfooter': ['', 'Footer to include in generated module file (Tcl syntax)', (8, 'modules')], 'parallel': [24, 'Degree of parallelism for e.g. make (default: based on the number of cores, active cpuset and restrictions in ulimit)', (3, 'build')], 'buildininstalldir': [False, 'Boolean to build (True) or not build (False) in the installation directory', (4, 'file-management')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'buildstats': [None, 'A list of dicts with build statistics', (9, 'other')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['R', 'Name of software', (0, 'mandatory')], 'recursive_module_unload': [False, 'Recursive unload of all dependencies when unloading module', (8, 'modules')], 'toolchain': [{'version': '2016a', 'name': 'foss'}, 'Name and version of toolchain', (0, 'mandatory')], 'preconfigopts': ['BLAS_LIBS="$LIBBLAS" LAPACK_LIBS="$LIBLAPACK"', 'Extra options pre-passed to configure.', (3, 'build')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'source_urls': [['http://cran.us.r-project.org/src/base/R-%(version_major)s'], 'List of URLs for source files', (3, 'build')], 'easyblock': [None, 'EasyBlock to use for building; if set to None, an easyblock is selected based on the software name', (3, 'build')], 'whatis': [None, 'List of brief (one line) package description entries', (8, 'modules')], 'software_license': [None, 'Software license', (0, 'mandatory')], 'configopts': ['--with-lapack --with-blas --with-pic --enable-threads --enable-R-shlib --with-tcltk --with-x --with-tcl-config=$EBROOTTCL/lib/tclConfig.sh --with-tk-config=$EBROOTTK/lib/tkConfig.sh --with-cairo --with-libpng --with-jpeglib --with-libtiff --with-recommended-packages=no', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'software_license_urls': [None, 'List of software license locations', (0, 'mandatory')]}
== 2016-06-04 01:10:04,805 templates.py:173 DEBUG version found in easyconfig is 3.3.0
== 2016-06-04 01:10:04,805 templates.py:210 DEBUG name: name, config: R
== 2016-06-04 01:10:04,805 templates.py:210 DEBUG name: version, config: 3.3.0
== 2016-06-04 01:10:04,805 templates.py:210 DEBUG name: versionsuffix, config:
== 2016-06-04 01:10:04,805 templates.py:210 DEBUG name: versionprefix, config:
== 2016-06-04 01:10:04,805 easyblock.py:2133 INFO Running method patch_step part of step patch
== 2016-06-04 01:10:04,806 easyblock.py:2122 DEBUG Not skipping prepare step (skippable: False, skip: None, skipsteps: [], module_only: False, force: True
== 2016-06-04 01:10:04,806 build_log.py:227 INFO preparing...
== 2016-06-04 01:10:04,806 easyblock.py:2130 INFO Starting prepare step
== 2016-06-04 01:10:04,809 templates.py:149 DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'configure_cmd_prefix': ['', 'Prefix to be glued before ./configure', (1, 'easyblock-specific')], 'postinstallcmds': [[], 'Commands to run after the install step.', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tar.gz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'modaltsoftname': [None, 'Module name to use (rather than using software name', (8, 'modules')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'hiddendependencies': [[], 'List of dependencies available as hidden modules', (5, 'dependencies')], 'checksums': [[], 'Checksums for sources and patches', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': ['', 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'prebuildopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['3.3.0', 'Version of software', (0, 'mandatory')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'modaliases': [{}, 'Aliases to be defined in module file', (8, 'modules')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[('openssl-devel', 'libssl-dev', 'libopenssl-devel')], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'modluafooter': ['', 'Footer to include in generated module file (Lua syntax)', (8, 'modules')], 'homepage': ['http://www.r-project.org/', 'The homepage of the software', (0, 'mandatory')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'buildopts': ['', 'Extra options passed to make step (default already has -j X)', (3, 'build')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['R is a free software environment for statistical computing and graphics.', 'A short description of the software', (0, 'mandatory')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')], 'exts_list': [['base', 'datasets', 'graphics', 'grDevices', 'grid', 'methods', 'parallel', 'splines', 'stats', 'stats4', 'tools', 'utils', ('Rmpi', '0.6-5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('abind', '1.4-3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('magic', '1.5-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('geometry', '0.3-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bit', '1.1-12', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('filehash', '2.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 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['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('phangorn', '2.0.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']})], 'List with extensions added to the base installation', (7, 'extensions')], 'docurls': [None, 'List of urls with documentation of the software (not necessarily on homepage)', (0, 'mandatory')], 'stop': [None, 'Keyword to halt the build process after a certain step.', (3, 'build')], 'sanity_check_commands': [[], "format: [(name, options)] e.g. [('gzip','-h')]. Using a non-tuple is equivalent to (name, '-h')", (3, 'build')], 'exts_classmap': [{}, 'Map of extension name to class for handling build and installation.', (7, 'extensions')], 'moduleforceunload': [False, 'Force unload of all modules when loading the extension', (8, 'modules')], 'dependencies': [[{'external_module_metadata': {}, 'full_mod_name': 'libreadline/6.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libreadline', 'dummy': False, 'short_mod_name': 'libreadline/6.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'ncurses/6.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'ncurses', 'dummy': False, 'short_mod_name': 'ncurses/6.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '6.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libpng/1.6.21-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libpng', 'dummy': False, 'short_mod_name': 'libpng/1.6.21-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.6.21', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libjpeg-turbo', 'dummy': False, 'short_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.4.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.0.6', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Java/1.8.0_92', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Java', 'dummy': True, 'short_mod_name': 'Java/1.8.0_92', 'external_module': False, 'versionsuffix': '', 'version': '1.8.0_92', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tcl/8.6.5-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tcl', 'dummy': False, 'short_mod_name': 'Tcl/8.6.5-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tk', 'dummy': False, 'short_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'external_module': False, 'versionsuffix': '-libX11-1.6.3', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cURL/7.47.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cURL', 'dummy': False, 'short_mod_name': 'cURL/7.47.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '7.47.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libxml2/2.9.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libxml2', 'dummy': False, 'short_mod_name': 'libxml2/2.9.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.9.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'GDAL/2.1.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'GDAL', 'dummy': False, 'short_mod_name': 'GDAL/2.1.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.1.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'PROJ/4.9.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'PROJ', 'dummy': False, 'short_mod_name': 'PROJ/4.9.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.9.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cairo/1.14.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cairo', 'dummy': False, 'short_mod_name': 'cairo/1.14.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.14.6', 'hidden': False, 'build_only': False}], 'List of dependencies', (5, 'dependencies')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'key': [None, 'Key for installing software', (6, 'license')], 'include_modpath_extensions': [True, 'Include $MODULEPATH extensions specified by module naming scheme.', (8, 'modules')], 'prefix_opt': [None, "Prefix command line option for configure script ('--prefix=' if None)", (1, 'easyblock-specific')], 'modloadmsg': [{}, 'Message that should be printed when generated module is loaded', (8, 'modules')], 'modtclfooter': ['', 'Footer to include in generated module file (Tcl syntax)', (8, 'modules')], 'parallel': [24, 'Degree of parallelism for e.g. make (default: based on the number of cores, active cpuset and restrictions in ulimit)', (3, 'build')], 'buildininstalldir': [False, 'Boolean to build (True) or not build (False) in the installation directory', (4, 'file-management')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'buildstats': [None, 'A list of dicts with build statistics', (9, 'other')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['R', 'Name of software', (0, 'mandatory')], 'recursive_module_unload': [False, 'Recursive unload of all dependencies when unloading module', (8, 'modules')], 'toolchain': [{'version': '2016a', 'name': 'foss'}, 'Name and version of toolchain', (0, 'mandatory')], 'preconfigopts': ['BLAS_LIBS="$LIBBLAS" LAPACK_LIBS="$LIBLAPACK"', 'Extra options pre-passed to configure.', (3, 'build')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'source_urls': [['http://cran.us.r-project.org/src/base/R-%(version_major)s'], 'List of URLs for source files', (3, 'build')], 'easyblock': [None, 'EasyBlock to use for building; if set to None, an easyblock is selected based on the software name', (3, 'build')], 'whatis': [None, 'List of brief (one line) package description entries', (8, 'modules')], 'software_license': [None, 'Software license', (0, 'mandatory')], 'configopts': ['--with-lapack --with-blas --with-pic --enable-threads --enable-R-shlib --with-tcltk --with-x --with-tcl-config=$EBROOTTCL/lib/tclConfig.sh --with-tk-config=$EBROOTTK/lib/tkConfig.sh --with-cairo --with-libpng --with-jpeglib --with-libtiff --with-recommended-packages=no', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'software_license_urls': [None, 'List of software license locations', (0, 'mandatory')]}
== 2016-06-04 01:10:04,815 templates.py:173 DEBUG version found in easyconfig is 3.3.0
== 2016-06-04 01:10:04,815 templates.py:210 DEBUG name: name, config: R
== 2016-06-04 01:10:04,816 templates.py:210 DEBUG name: version, config: 3.3.0
== 2016-06-04 01:10:04,816 templates.py:210 DEBUG name: versionsuffix, config:
== 2016-06-04 01:10:04,816 templates.py:210 DEBUG name: versionprefix, config:
== 2016-06-04 01:10:04,819 templates.py:149 DEBUG config: {'preinstallopts': ['', 'Extra prefix options for installation.', (3, 'build')], 'configure_cmd_prefix': ['', 'Prefix to be glued before ./configure', (1, 'easyblock-specific')], 'postinstallcmds': [[], 'Commands to run after the install step.', (3, 'build')], 'moduleloadnoconflict': [False, "Don't check for conflicts, unload other versions instead ", (8, 'modules')], 'skip': [False, 'Skip existing software', (3, 'build')], 'cleanupoldbuild': [True, 'Boolean to remove (True) or backup (False) the previous build directory with identical name or not.', (4, 'file-management')], 'installopts': ['', 'Extra options for installation', (3, 'build')], 'sources': [['%(name)s-%(version)s.tar.gz'], 'List of source files', (3, 'build')], 'versionsuffix': ['', 'Additional suffix for software version (placed after toolchain name)', (3, 'build')], 'license_server': [None, 'License server for software', (6, 'license')], 'modaltsoftname': [None, 'Module name to use (rather than using software name', (8, 'modules')], 'keeppreviousinstall': [False, 'Boolean to keep the previous installation with identical name. Experts only!', (4, 'file-management')], 'hiddendependencies': [[], 'List of dependencies available as hidden modules', (5, 'dependencies')], 'checksums': [[], 'Checksums for sources and patches', (3, 'build')], 'keepsymlinks': [False, 'Boolean to determine whether symlinks are to be kept during copying or if the content of the files pointed to should be copied', (4, 'file-management')], 'cleanupoldinstall': [True, 'Boolean to remove (True) or backup (False) the previous install directory with identical name or not.', (4, 'file-management')], 'builddependencies': [[], 'List of build dependencies', (5, 'dependencies')], 'dontcreateinstalldir': [False, 'Boolean to create (False) or not create (True) the install directory', (4, 'file-management')], 'modextravars': [{}, 'Extra environment variables to be added to module file', (8, 'modules')], 'unpack_options': ['', 'Extra options for unpacking source', (3, 'build')], 'group': [None, 'Name of the user group for which the software should be available', (6, 'license')], 'versionprefix': ['', 'Additional prefix for software version (placed before version and toolchain name)', (3, 'build')], 'parsed': [True, 'This is a parsed easyconfig', 'HIDDEN'], 'prebuildopts': ['', 'Extra options pre-passed to build command.', (3, 'build')], 'easybuild_version': [None, 'EasyBuild-version this spec-file was written for', (3, 'build')], 'skipsteps': [[], 'Skip these steps', (3, 'build')], 'start_dir': [None, 'Path to start the make in. If the path is absolute, use that path. If not, this is added to the guessed path.', (4, 'file-management')], 'version': ['3.3.0', 'Version of software', (0, 'mandatory')], 'exts_filter': [None, 'Extension filter details: template for cmd and input to cmd (templates for name, version and src).', (7, 'extensions')], 'modaliases': [{}, 'Aliases to be defined in module file', (8, 'modules')], 'allow_system_deps': [[], 'Allow listed system dependencies (format: (<name>, <version>))', (5, 'dependencies')], 'osdependencies': [[('openssl-devel', 'libssl-dev', 'libopenssl-devel')], 'OS dependencies that should be present on the system', (5, 'dependencies')], 'modluafooter': ['', 'Footer to include in generated module file (Lua syntax)', (8, 'modules')], 'homepage': ['http://www.r-project.org/', 'The homepage of the software', (0, 'mandatory')], 'license_file': [None, 'License file for software', (6, 'license')], 'tests': [[], 'List of test-scripts to run after install. A test script should return a non-zero exit status to fail', (3, 'build')], 'buildopts': ['', 'Extra options passed to make step (default already has -j X)', (3, 'build')], 'tar_config_opts': [False, 'Override tar settings as determined by configure.', (1, 'easyblock-specific')], 'description': ['R is a free software environment for statistical computing and graphics.', 'A short description of the software', (0, 'mandatory')], 'modextrapaths': [{}, 'Extra paths to be prepended in module file', (8, 'modules')], 'exts_list': [['base', 'datasets', 'graphics', 'grDevices', 'grid', 'methods', 'parallel', 'splines', 'stats', 'stats4', 'tools', 'utils', ('Rmpi', '0.6-5', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('abind', '1.4-3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('magic', '1.5-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('geometry', '0.3-6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bit', '1.1-12', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('filehash', '2.3', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('ff', '2.2-13', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bnlearn', '4.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('bootstrap', '2015.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('combinat', '0.0-8', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('deal', '1.2-37', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('fdrtool', '1.2.15', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('formatR', '1.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('gtools', '3.5.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('gdata', '2.17.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('GSA', '1.03', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('highr', '0.6', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('infotheo', '1.2.0', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('lars', '1.2', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('lazy', '1.2-15', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('kernlab', '0.9-24', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('mime', '0.4', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 'http://cran.r-project.org/src/contrib/', 'http://cran.freestatistics.org/src/contrib']}), ('markdown', '0.7.7', {'source_tmpl': '%(name)s_%(version)s.tar.gz', 'source_urls': ['http://cran.r-project.org/src/contrib/Archive/%(name)s', 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'libpng/1.6.21-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libpng', 'dummy': False, 'short_mod_name': 'libpng/1.6.21-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.6.21', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libjpeg-turbo', 'dummy': False, 'short_mod_name': 'libjpeg-turbo/1.4.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.4.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'LibTIFF', 'dummy': False, 'short_mod_name': 'LibTIFF/4.0.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.0.6', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Java/1.8.0_92', 'toolchain': {'version': 'dummy', 'name': 'dummy'}, 'name': 'Java', 'dummy': True, 'short_mod_name': 'Java/1.8.0_92', 'external_module': False, 'versionsuffix': '', 'version': '1.8.0_92', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tcl/8.6.5-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tcl', 'dummy': False, 'short_mod_name': 'Tcl/8.6.5-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'Tk', 'dummy': False, 'short_mod_name': 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'external_module': False, 'versionsuffix': '-libX11-1.6.3', 'version': '8.6.5', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cURL/7.47.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cURL', 'dummy': False, 'short_mod_name': 'cURL/7.47.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '7.47.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'libxml2/2.9.3-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'libxml2', 'dummy': False, 'short_mod_name': 'libxml2/2.9.3-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.9.3', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'GDAL/2.1.0-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'GDAL', 'dummy': False, 'short_mod_name': 'GDAL/2.1.0-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '2.1.0', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'PROJ/4.9.2-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'PROJ', 'dummy': False, 'short_mod_name': 'PROJ/4.9.2-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '4.9.2', 'hidden': False, 'build_only': False}, {'external_module_metadata': {}, 'full_mod_name': 'cairo/1.14.6-foss-2016a', 'toolchain': {'version': '2016a', 'name': 'foss'}, 'name': 'cairo', 'dummy': False, 'short_mod_name': 'cairo/1.14.6-foss-2016a', 'external_module': False, 'versionsuffix': '', 'version': '1.14.6', 'hidden': False, 'build_only': False}], 'List of dependencies', (5, 'dependencies')], 'moduleclass': ['lang', 'Module class to be used for this software', (8, 'modules')], 'key': [None, 'Key for installing software', (6, 'license')], 'include_modpath_extensions': [True, 'Include $MODULEPATH extensions specified by module naming scheme.', (8, 'modules')], 'prefix_opt': [None, "Prefix command line option for configure script ('--prefix=' if None)", (1, 'easyblock-specific')], 'modloadmsg': [{}, 'Message that should be printed when generated module is loaded', (8, 'modules')], 'modtclfooter': ['', 'Footer to include in generated module file (Tcl syntax)', (8, 'modules')], 'parallel': [24, 'Degree of parallelism for e.g. make (default: based on the number of cores, active cpuset and restrictions in ulimit)', (3, 'build')], 'buildininstalldir': [False, 'Boolean to build (True) or not build (False) in the installation directory', (4, 'file-management')], 'patches': [[], 'List of patches to apply', (3, 'build')], 'sanity_check_paths': [{}, "List of files and directories to check (format: {'files':<list>, 'dirs':<list>})", (3, 'build')], 'runtest': [None, 'Indicates if a test should be run after make; should specify argument after make (for e.g.,"test" for make test)', (3, 'build')], 'onlytcmod': [False, 'Boolean/string to indicate if the toolchain should only load the environment with module (True) or also set all other variables (False) like compiler CC etc (if string: comma separated list of variables that will be ignored).', (2, 'toolchain')], 'buildstats': [None, 'A list of dicts with build statistics', (9, 'other')], 'unwanted_env_vars': [[], "List of environment variables that shouldn't be set during build", (3, 'build')], 'name': ['R', 'Name of software', (0, 'mandatory')], 'recursive_module_unload': [False, 'Recursive unload of all dependencies when unloading module', (8, 'modules')], 'toolchain': [{'version': '2016a', 'name': 'foss'}, 'Name and version of toolchain', (0, 'mandatory')], 'preconfigopts': ['BLAS_LIBS="$LIBBLAS" LAPACK_LIBS="$LIBLAPACK"', 'Extra options pre-passed to configure.', (3, 'build')], 'maxparallel': [None, 'Max degree of parallelism', (3, 'build')], 'license_server_port': [None, 'Port for license server', (6, 'license')], 'exts_defaultclass': [None, 'List of module for and name of the default extension class', (7, 'extensions')], 'toolchainopts': [None, 'Extra options for compilers', (2, 'toolchain')], 'source_urls': [['http://cran.us.r-project.org/src/base/R-%(version_major)s'], 'List of URLs for source files', (3, 'build')], 'easyblock': [None, 'EasyBlock to use for building; if set to None, an easyblock is selected based on the software name', (3, 'build')], 'whatis': [None, 'List of brief (one line) package description entries', (8, 'modules')], 'software_license': [None, 'Software license', (0, 'mandatory')], 'configopts': ['--with-lapack --with-blas --with-pic --enable-threads --enable-R-shlib --with-tcltk --with-x --with-tcl-config=$EBROOTTCL/lib/tclConfig.sh --with-tk-config=$EBROOTTK/lib/tkConfig.sh --with-cairo --with-libpng --with-jpeglib --with-libtiff --with-recommended-packages=no', 'Extra options passed to configure (default already has --prefix)', (3, 'build')], 'software_license_urls': [None, 'List of software license locations', (0, 'mandatory')]}
== 2016-06-04 01:10:04,825 templates.py:173 DEBUG version found in easyconfig is 3.3.0
== 2016-06-04 01:10:04,826 templates.py:210 DEBUG name: name, config: R
== 2016-06-04 01:10:04,826 templates.py:210 DEBUG name: version, config: 3.3.0
== 2016-06-04 01:10:04,826 templates.py:210 DEBUG name: versionsuffix, config:
== 2016-06-04 01:10:04,826 templates.py:210 DEBUG name: versionprefix, config:
== 2016-06-04 01:10:04,826 easyblock.py:2133 INFO Running method prepare_step part of step prepare
== 2016-06-04 01:10:04,826 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,826 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2016-06-04 01:10:04,826 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:04,827 modules.py:607 DEBUG Running module command '/bin/modulecmd python show foss/2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:04,844 modules.py:613 DEBUG Output of module command '/bin/modulecmd python show foss/2016a': stdout: ; stderr: -------------------------------------------------------------------
/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:
module-whatis Description: GNU Compiler Collection (GCC) based compiler toolchain, including
OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. - Homepage: (none)
conflict foss
module load GCC/4.9.3-2.25
module load OpenMPI/1.10.2-GCC-4.9.3-2.25
module load OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0
module load FFTW/3.3.4-gompi-2016a
module load ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0
setenv EBROOTFOSS /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/foss/2016a
setenv EBVERSIONFOSS 2016a
setenv EBDEVELFOSS /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/foss/2016a/easybuild/foss-2016a-easybuild-devel
-------------------------------------------------------------------
== 2016-06-04 01:10:04,844 modules.py:526 DEBUG Cached result for 'module show foss/2016a' with key '('MODULEPATH=/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc', 'modulecmd', 'foss/2016a')': -------------------------------------------------------------------
/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:
module-whatis Description: GNU Compiler Collection (GCC) based compiler toolchain, including
OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. - Homepage: (none)
conflict foss
module load GCC/4.9.3-2.25
module load OpenMPI/1.10.2-GCC-4.9.3-2.25
module load OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0
module load FFTW/3.3.4-gompi-2016a
module load ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0
setenv EBROOTFOSS /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/foss/2016a
setenv EBVERSIONFOSS 2016a
setenv EBDEVELFOSS /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/foss/2016a/easybuild/foss-2016a-easybuild-devel
-------------------------------------------------------------------
== 2016-06-04 01:10:04,844 toolchain.py:545 DEBUG Loading toolchain module and dependencies...
== 2016-06-04 01:10:04,845 toolchain.py:478 DEBUG Loading module for toolchain: foss/2016a
== 2016-06-04 01:10:04,845 modules.py:384 DEBUG Current value of $MODULEPATH already matches list of module path ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all', '/etc/modulefiles/vsc']
== 2016-06-04 01:10:04,845 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,845 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '' to '' in environment for module command
== 2016-06-04 01:10:04,845 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:04,845 modules.py:607 DEBUG Running module command '/bin/modulecmd python load foss/2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:04,973 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load foss/2016a': stdout: os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['EBDEVELBINUTILS'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/easybuild/binutils-2.25-GCCcore-4.9.3-easybuild-devel'
os.environ['EBDEVELFFTW'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/easybuild/FFTW-3.3.4-gompi-2016a-easybuild-devel'
os.environ['EBDEVELFOSS'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/foss/2016a/easybuild/foss-2016a-easybuild-devel'
os.environ['EBDEVELGCC'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCC/4.9.3-2.25/easybuild/GCC-4.9.3-2.25-easybuild-devel'
os.environ['EBDEVELGCCCORE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/easybuild/GCCcore-4.9.3-easybuild-devel'
os.environ['EBDEVELGOMPI'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/gompi/2016a/easybuild/gompi-2016a-easybuild-devel'
os.environ['EBDEVELHWLOC'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/easybuild/hwloc-1.11.2-GCC-4.9.3-2.25-easybuild-devel'
os.environ['EBDEVELNUMACTL'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/easybuild/numactl-2.0.11-GCC-4.9.3-2.25-easybuild-devel'
os.environ['EBDEVELOPENBLAS'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/easybuild/OpenBLAS-0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0-easybuild-devel'
os.environ['EBDEVELOPENMPI'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/easybuild/OpenMPI-1.10.2-GCC-4.9.3-2.25-easybuild-devel'
os.environ['EBDEVELSCALAPACK'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/easybuild/ScaLAPACK-2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0-easybuild-devel'
os.environ['EBROOTBINUTILS'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3'
os.environ['EBROOTFFTW'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a'
os.environ['EBROOTFOSS'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/foss/2016a'
os.environ['EBROOTGCC'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3'
os.environ['EBROOTGCCCORE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3'
os.environ['EBROOTGOMPI'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/gompi/2016a'
os.environ['EBROOTHWLOC'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25'
os.environ['EBROOTNUMACTL'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25'
os.environ['EBROOTOPENBLAS'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0'
os.environ['EBROOTOPENMPI'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25'
os.environ['EBROOTSCALAPACK'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0'
os.environ['EBVERSIONBINUTILS'] = '2.25'
os.environ['EBVERSIONFFTW'] = '3.3.4'
os.environ['EBVERSIONFOSS'] = '2016a'
os.environ['EBVERSIONGCC'] = '4.9.3'
os.environ['EBVERSIONGCCCORE'] = '4.9.3'
os.environ['EBVERSIONGOMPI'] = '2016a'
os.environ['EBVERSIONHWLOC'] = '1.11.2'
os.environ['EBVERSIONNUMACTL'] = '2.0.11'
os.environ['EBVERSIONOPENBLAS'] = '0.2.15'
os.environ['EBVERSIONOPENMPI'] = '1.10.2'
os.environ['EBVERSIONSCALAPACK'] = '2.0.2'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
os.environ['LOADEDMODULES'] = 'cluster/golett:GCCcore/4.9.3:binutils/2.25-GCCcore-4.9.3:GCC/4.9.3-2.25:numactl/2.0.11-GCC-4.9.3-2.25:hwloc/1.11.2-GCC-4.9.3-2.25:OpenMPI/1.10.2-GCC-4.9.3-2.25:OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:gompi/2016a:FFTW/3.3.4-gompi-2016a:ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:foss/2016a'
os.environ['MANPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/share/man:/usr/share/man:/usr/local/share/man'
os.environ['PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/sbin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/bin:/user/home/gent/vsc400/vsc40023/lmod/6.3.4/libexec:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin'
os.environ['PKG_CONFIG_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib/pkgconfig'
os.environ['_LMFILES_'] = '/etc/modulefiles/vsc/cluster/golett:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCCcore/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/binutils/2.25-GCCcore-4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCC/4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/numactl/2.0.11-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/hwloc/1.11.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenMPI/1.10.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/gompi/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/FFTW/3.3.4-gompi-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a'
; stderr:
== 2016-06-04 01:10:04,975 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:04,975 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:04,975 toolchain.py:507 DEBUG Loading modules for dependencies: ['libreadline/6.3-foss-2016a', 'ncurses/6.0-foss-2016a', 'libpng/1.6.21-foss-2016a', 'libjpeg-turbo/1.4.2-foss-2016a', 'LibTIFF/4.0.6-foss-2016a', 'Java/1.8.0_92', 'Tcl/8.6.5-foss-2016a', 'Tk/8.6.5-foss-2016a-libX11-1.6.3', 'cURL/7.47.0-foss-2016a', 'libxml2/2.9.3-foss-2016a', 'GDAL/2.1.0-foss-2016a', 'PROJ/4.9.2-foss-2016a', 'cairo/1.14.6-foss-2016a']
== 2016-06-04 01:10:04,975 modules.py:384 DEBUG Current value of $MODULEPATH already matches list of module path ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all', '/etc/modulefiles/vsc']
== 2016-06-04 01:10:04,975 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:04,975 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:04,976 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:04,976 modules.py:607 DEBUG Running module command '/bin/modulecmd python load libreadline/6.3-foss-2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,017 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load libreadline/6.3-foss-2016a': stdout: os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['EBDEVELLIBREADLINE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/easybuild/libreadline-6.3-foss-2016a-easybuild-devel'
os.environ['EBDEVELNCURSES'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/easybuild/ncurses-6.0-foss-2016a-easybuild-devel'
os.environ['EBROOTLIBREADLINE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a'
os.environ['EBROOTNCURSES'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a'
os.environ['EBVERSIONLIBREADLINE'] = '6.3'
os.environ['EBVERSIONNCURSES'] = '6.0'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
os.environ['LOADEDMODULES'] = 'cluster/golett:GCCcore/4.9.3:binutils/2.25-GCCcore-4.9.3:GCC/4.9.3-2.25:numactl/2.0.11-GCC-4.9.3-2.25:hwloc/1.11.2-GCC-4.9.3-2.25:OpenMPI/1.10.2-GCC-4.9.3-2.25:OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:gompi/2016a:FFTW/3.3.4-gompi-2016a:ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:foss/2016a:ncurses/6.0-foss-2016a:libreadline/6.3-foss-2016a'
os.environ['MANPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/share/man:/usr/share/man:/usr/local/share/man'
os.environ['PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/sbin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/bin:/user/home/gent/vsc400/vsc40023/lmod/6.3.4/libexec:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin'
os.environ['_LMFILES_'] = '/etc/modulefiles/vsc/cluster/golett:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCCcore/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/binutils/2.25-GCCcore-4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCC/4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/numactl/2.0.11-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/hwloc/1.11.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenMPI/1.10.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/gompi/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/FFTW/3.3.4-gompi-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ncurses/6.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libreadline/6.3-foss-2016a'
; stderr:
== 2016-06-04 01:10:05,018 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:05,018 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:05,018 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:05,018 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:05,018 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:05,018 modules.py:607 DEBUG Running module command '/bin/modulecmd python load ncurses/6.0-foss-2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,046 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load ncurses/6.0-foss-2016a': stdout: os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib'
; stderr:
== 2016-06-04 01:10:05,047 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:05,047 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:05,047 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:05,047 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:05,047 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:05,047 modules.py:607 DEBUG Running module command '/bin/modulecmd python load libpng/1.6.21-foss-2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,087 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load libpng/1.6.21-foss-2016a': stdout: os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['EBDEVELLIBPNG'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/easybuild/libpng-1.6.21-foss-2016a-easybuild-devel'
os.environ['EBDEVELZLIB'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/easybuild/zlib-1.2.8-foss-2016a-easybuild-devel'
os.environ['EBROOTLIBPNG'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a'
os.environ['EBROOTZLIB'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a'
os.environ['EBVERSIONLIBPNG'] = '1.6.21'
os.environ['EBVERSIONZLIB'] = '1.2.8'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
os.environ['LOADEDMODULES'] = 'cluster/golett:GCCcore/4.9.3:binutils/2.25-GCCcore-4.9.3:GCC/4.9.3-2.25:numactl/2.0.11-GCC-4.9.3-2.25:hwloc/1.11.2-GCC-4.9.3-2.25:OpenMPI/1.10.2-GCC-4.9.3-2.25:OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:gompi/2016a:FFTW/3.3.4-gompi-2016a:ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:foss/2016a:ncurses/6.0-foss-2016a:libreadline/6.3-foss-2016a:zlib/1.2.8-foss-2016a:libpng/1.6.21-foss-2016a'
os.environ['MANPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/share/man:/usr/share/man:/usr/local/share/man'
os.environ['PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/sbin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/bin:/user/home/gent/vsc400/vsc40023/lmod/6.3.4/libexec:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin'
os.environ['PKG_CONFIG_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib/pkgconfig'
os.environ['_LMFILES_'] = '/etc/modulefiles/vsc/cluster/golett:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCCcore/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/binutils/2.25-GCCcore-4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCC/4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/numactl/2.0.11-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/hwloc/1.11.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenMPI/1.10.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/gompi/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/FFTW/3.3.4-gompi-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ncurses/6.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libreadline/6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/zlib/1.2.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libpng/1.6.21-foss-2016a'
; stderr:
== 2016-06-04 01:10:05,088 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:05,088 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:05,088 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:05,088 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:05,088 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:05,089 modules.py:607 DEBUG Running module command '/bin/modulecmd python load libjpeg-turbo/1.4.2-foss-2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,124 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load libjpeg-turbo/1.4.2-foss-2016a': stdout: os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['EBDEVELLIBJPEGMINTURBO'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/easybuild/libjpeg-turbo-1.4.2-foss-2016a-easybuild-devel'
os.environ['EBDEVELNASM'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/easybuild/NASM-2.11.08-foss-2016a-easybuild-devel'
os.environ['EBROOTLIBJPEGMINTURBO'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a'
os.environ['EBROOTNASM'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a'
os.environ['EBVERSIONLIBJPEGMINTURBO'] = '1.4.2'
os.environ['EBVERSIONNASM'] = '2.11.08'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
os.environ['LOADEDMODULES'] = 'cluster/golett:GCCcore/4.9.3:binutils/2.25-GCCcore-4.9.3:GCC/4.9.3-2.25:numactl/2.0.11-GCC-4.9.3-2.25:hwloc/1.11.2-GCC-4.9.3-2.25:OpenMPI/1.10.2-GCC-4.9.3-2.25:OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:gompi/2016a:FFTW/3.3.4-gompi-2016a:ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:foss/2016a:ncurses/6.0-foss-2016a:libreadline/6.3-foss-2016a:zlib/1.2.8-foss-2016a:libpng/1.6.21-foss-2016a:NASM/2.11.08-foss-2016a:libjpeg-turbo/1.4.2-foss-2016a'
os.environ['MANPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/share/man:/usr/share/man:/usr/local/share/man'
os.environ['PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/sbin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/bin:/user/home/gent/vsc400/vsc40023/lmod/6.3.4/libexec:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin'
os.environ['_LMFILES_'] = '/etc/modulefiles/vsc/cluster/golett:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCCcore/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/binutils/2.25-GCCcore-4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCC/4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/numactl/2.0.11-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/hwloc/1.11.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenMPI/1.10.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/gompi/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/FFTW/3.3.4-gompi-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ncurses/6.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libreadline/6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/zlib/1.2.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libpng/1.6.21-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/NASM/2.11.08-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libjpeg-turbo/1.4.2-foss-2016a'
; stderr:
== 2016-06-04 01:10:05,125 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:05,125 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:05,125 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:05,125 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:05,125 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:05,125 modules.py:607 DEBUG Running module command '/bin/modulecmd python load LibTIFF/4.0.6-foss-2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,168 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load LibTIFF/4.0.6-foss-2016a': stdout: os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['EBDEVELLIBTIFF'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/easybuild/LibTIFF-4.0.6-foss-2016a-easybuild-devel'
os.environ['EBROOTLIBTIFF'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a'
os.environ['EBVERSIONLIBTIFF'] = '4.0.6'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
os.environ['LOADEDMODULES'] = 'cluster/golett:GCCcore/4.9.3:binutils/2.25-GCCcore-4.9.3:GCC/4.9.3-2.25:numactl/2.0.11-GCC-4.9.3-2.25:hwloc/1.11.2-GCC-4.9.3-2.25:OpenMPI/1.10.2-GCC-4.9.3-2.25:OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:gompi/2016a:FFTW/3.3.4-gompi-2016a:ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:foss/2016a:ncurses/6.0-foss-2016a:libreadline/6.3-foss-2016a:zlib/1.2.8-foss-2016a:libpng/1.6.21-foss-2016a:NASM/2.11.08-foss-2016a:libjpeg-turbo/1.4.2-foss-2016a:LibTIFF/4.0.6-foss-2016a'
os.environ['MANPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/share/man:/usr/share/man:/usr/local/share/man'
os.environ['PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/sbin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/bin:/user/home/gent/vsc400/vsc40023/lmod/6.3.4/libexec:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin'
os.environ['PKG_CONFIG_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib/pkgconfig'
os.environ['_LMFILES_'] = '/etc/modulefiles/vsc/cluster/golett:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCCcore/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/binutils/2.25-GCCcore-4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCC/4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/numactl/2.0.11-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/hwloc/1.11.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenMPI/1.10.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/gompi/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/FFTW/3.3.4-gompi-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ncurses/6.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libreadline/6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/zlib/1.2.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libpng/1.6.21-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/NASM/2.11.08-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libjpeg-turbo/1.4.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/LibTIFF/4.0.6-foss-2016a'
; stderr:
== 2016-06-04 01:10:05,169 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:05,169 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:05,169 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:05,170 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:05,170 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:05,170 modules.py:607 DEBUG Running module command '/bin/modulecmd python load Java/1.8.0_92' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,198 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load Java/1.8.0_92': stdout: os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['EBDEVELJAVA'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/easybuild/Java-1.8.0_92-easybuild-devel'
os.environ['EBROOTJAVA'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92'
os.environ['EBVERSIONJAVA'] = '1.8.0_92'
os.environ['JAVA_HOME'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
os.environ['LOADEDMODULES'] = 'cluster/golett:GCCcore/4.9.3:binutils/2.25-GCCcore-4.9.3:GCC/4.9.3-2.25:numactl/2.0.11-GCC-4.9.3-2.25:hwloc/1.11.2-GCC-4.9.3-2.25:OpenMPI/1.10.2-GCC-4.9.3-2.25:OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:gompi/2016a:FFTW/3.3.4-gompi-2016a:ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:foss/2016a:ncurses/6.0-foss-2016a:libreadline/6.3-foss-2016a:zlib/1.2.8-foss-2016a:libpng/1.6.21-foss-2016a:NASM/2.11.08-foss-2016a:libjpeg-turbo/1.4.2-foss-2016a:LibTIFF/4.0.6-foss-2016a:Java/1.8.0_92'
os.environ['MANPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/share/man:/usr/share/man:/usr/local/share/man'
os.environ['PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/sbin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/bin:/user/home/gent/vsc400/vsc40023/lmod/6.3.4/libexec:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin'
os.environ['_LMFILES_'] = '/etc/modulefiles/vsc/cluster/golett:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCCcore/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/binutils/2.25-GCCcore-4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCC/4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/numactl/2.0.11-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/hwloc/1.11.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenMPI/1.10.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/gompi/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/FFTW/3.3.4-gompi-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ncurses/6.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libreadline/6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/zlib/1.2.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libpng/1.6.21-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/NASM/2.11.08-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libjpeg-turbo/1.4.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/LibTIFF/4.0.6-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Java/1.8.0_92'
; stderr:
== 2016-06-04 01:10:05,198 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:05,198 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:05,199 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:05,199 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:05,199 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:05,199 modules.py:607 DEBUG Running module command '/bin/modulecmd python load Tcl/8.6.5-foss-2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,230 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load Tcl/8.6.5-foss-2016a': stdout: os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['EBDEVELTCL'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/easybuild/Tcl-8.6.5-foss-2016a-easybuild-devel'
os.environ['EBROOTTCL'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a'
os.environ['EBVERSIONTCL'] = '8.6.5'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
os.environ['LOADEDMODULES'] = 'cluster/golett:GCCcore/4.9.3:binutils/2.25-GCCcore-4.9.3:GCC/4.9.3-2.25:numactl/2.0.11-GCC-4.9.3-2.25:hwloc/1.11.2-GCC-4.9.3-2.25:OpenMPI/1.10.2-GCC-4.9.3-2.25:OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:gompi/2016a:FFTW/3.3.4-gompi-2016a:ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:foss/2016a:ncurses/6.0-foss-2016a:libreadline/6.3-foss-2016a:zlib/1.2.8-foss-2016a:libpng/1.6.21-foss-2016a:NASM/2.11.08-foss-2016a:libjpeg-turbo/1.4.2-foss-2016a:LibTIFF/4.0.6-foss-2016a:Java/1.8.0_92:Tcl/8.6.5-foss-2016a'
os.environ['MANPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/share/man:/usr/share/man:/usr/local/share/man'
os.environ['PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/sbin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/bin:/user/home/gent/vsc400/vsc40023/lmod/6.3.4/libexec:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin'
os.environ['PKG_CONFIG_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib/pkgconfig'
os.environ['_LMFILES_'] = '/etc/modulefiles/vsc/cluster/golett:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCCcore/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/binutils/2.25-GCCcore-4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCC/4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/numactl/2.0.11-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/hwloc/1.11.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenMPI/1.10.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/gompi/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/FFTW/3.3.4-gompi-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ncurses/6.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libreadline/6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/zlib/1.2.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libpng/1.6.21-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/NASM/2.11.08-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libjpeg-turbo/1.4.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/LibTIFF/4.0.6-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Java/1.8.0_92:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Tcl/8.6.5-foss-2016a'
; stderr:
== 2016-06-04 01:10:05,230 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:05,231 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:05,231 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:05,231 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:05,231 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:05,231 modules.py:607 DEBUG Running module command '/bin/modulecmd python load Tk/8.6.5-foss-2016a-libX11-1.6.3' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,431 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load Tk/8.6.5-foss-2016a-libX11-1.6.3': stdout: os.environ['ACLOCAL_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/share/aclocal'
os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/include/freetype2:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['EBDEVELEXPAT'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/easybuild/expat-2.1.0-foss-2016a-easybuild-devel'
os.environ['EBDEVELFONTCONFIG'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/easybuild/fontconfig-2.11.94-foss-2016a-easybuild-devel'
os.environ['EBDEVELFREETYPE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/easybuild/freetype-2.6.2-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBICE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/easybuild/libICE-1.0.9-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBSM'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/easybuild/libSM-1.2.2-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBX11'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/easybuild/libX11-1.6.3-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBXAU'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/easybuild/libXau-1.0.8-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBXCB'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/easybuild/libxcb-1.11.1-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBXDMCP'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/easybuild/libXdmcp-1.1.2-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBXEXT'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/easybuild/libXext-1.3.3-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBXFT'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/easybuild/libXft-2.3.2-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBXRENDER'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/easybuild/libXrender-0.9.9-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBXT'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/easybuild/libXt-1.1.5-foss-2016a-easybuild-devel'
os.environ['EBDEVELTK'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/easybuild/Tk-8.6.5-foss-2016a-libX11-1.6.3-easybuild-devel'
os.environ['EBDEVELXTRANS'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/easybuild/xtrans-1.3.5-foss-2016a-easybuild-devel'
os.environ['EBROOTEXPAT'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a'
os.environ['EBROOTFONTCONFIG'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a'
os.environ['EBROOTFREETYPE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a'
os.environ['EBROOTLIBICE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a'
os.environ['EBROOTLIBSM'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a'
os.environ['EBROOTLIBX11'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a'
os.environ['EBROOTLIBXAU'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a'
os.environ['EBROOTLIBXCB'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a'
os.environ['EBROOTLIBXDMCP'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a'
os.environ['EBROOTLIBXEXT'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a'
os.environ['EBROOTLIBXFT'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a'
os.environ['EBROOTLIBXRENDER'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a'
os.environ['EBROOTLIBXT'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a'
os.environ['EBROOTTK'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3'
os.environ['EBROOTXTRANS'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a'
os.environ['EBVERSIONEXPAT'] = '2.1.0'
os.environ['EBVERSIONFONTCONFIG'] = '2.11.94'
os.environ['EBVERSIONFREETYPE'] = '2.6.2'
os.environ['EBVERSIONLIBICE'] = '1.0.9'
os.environ['EBVERSIONLIBSM'] = '1.2.2'
os.environ['EBVERSIONLIBX11'] = '1.6.3'
os.environ['EBVERSIONLIBXAU'] = '1.0.8'
os.environ['EBVERSIONLIBXCB'] = '1.11.1'
os.environ['EBVERSIONLIBXDMCP'] = '1.1.2'
os.environ['EBVERSIONLIBXEXT'] = '1.3.3'
os.environ['EBVERSIONLIBXFT'] = '2.3.2'
os.environ['EBVERSIONLIBXRENDER'] = '0.9.9'
os.environ['EBVERSIONLIBXT'] = '1.1.5'
os.environ['EBVERSIONTK'] = '8.6.5'
os.environ['EBVERSIONXTRANS'] = '1.3.5'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
os.environ['LOADEDMODULES'] = 'cluster/golett:GCCcore/4.9.3:binutils/2.25-GCCcore-4.9.3:GCC/4.9.3-2.25:numactl/2.0.11-GCC-4.9.3-2.25:hwloc/1.11.2-GCC-4.9.3-2.25:OpenMPI/1.10.2-GCC-4.9.3-2.25:OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:gompi/2016a:FFTW/3.3.4-gompi-2016a:ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:foss/2016a:ncurses/6.0-foss-2016a:libreadline/6.3-foss-2016a:zlib/1.2.8-foss-2016a:libpng/1.6.21-foss-2016a:NASM/2.11.08-foss-2016a:libjpeg-turbo/1.4.2-foss-2016a:LibTIFF/4.0.6-foss-2016a:Java/1.8.0_92:Tcl/8.6.5-foss-2016a:libXau/1.0.8-foss-2016a:libXdmcp/1.1.2-foss-2016a:libxcb/1.11.1-foss-2016a:libX11/1.6.3-foss-2016a:xtrans/1.3.5-foss-2016a:libICE/1.0.9-foss-2016a:libSM/1.2.2-foss-2016a:libXt/1.1.5-foss-2016a:libXext/1.3.3-foss-2016a:libXrender/0.9.9-foss-2016a:freetype/2.6.2-foss-2016a:expat/2.1.0-foss-2016a:fontconfig/2.11.94-foss-2016a:libXft/2.3.2-foss-2016a:Tk/8.6.5-foss-2016a-libX11-1.6.3'
os.environ['MANPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/share/man:/usr/share/man:/usr/local/share/man'
os.environ['PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/sbin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/bin:/user/home/gent/vsc400/vsc40023/lmod/6.3.4/libexec:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin'
os.environ['PKG_CONFIG_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/share/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib/pkgconfig'
os.environ['_LMFILES_'] = '/etc/modulefiles/vsc/cluster/golett:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCCcore/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/binutils/2.25-GCCcore-4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCC/4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/numactl/2.0.11-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/hwloc/1.11.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenMPI/1.10.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/gompi/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/FFTW/3.3.4-gompi-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ncurses/6.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libreadline/6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/zlib/1.2.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libpng/1.6.21-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/NASM/2.11.08-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libjpeg-turbo/1.4.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/LibTIFF/4.0.6-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Java/1.8.0_92:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Tcl/8.6.5-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXau/1.0.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXdmcp/1.1.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libxcb/1.11.1-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libX11/1.6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/xtrans/1.3.5-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libICE/1.0.9-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libSM/1.2.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXt/1.1.5-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXext/1.3.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXrender/0.9.9-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/freetype/2.6.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/expat/2.1.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/fontconfig/2.11.94-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXft/2.3.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Tk/8.6.5-foss-2016a-libX11-1.6.3'
; stderr:
== 2016-06-04 01:10:05,433 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:05,433 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:05,433 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:05,433 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:05,433 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:05,434 modules.py:607 DEBUG Running module command '/bin/modulecmd python load cURL/7.47.0-foss-2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,465 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load cURL/7.47.0-foss-2016a': stdout: os.environ['ACLOCAL_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/share/aclocal'
os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/include/freetype2:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['CURL_INCLUDES'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/include'
os.environ['EBDEVELCURL'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/easybuild/cURL-7.47.0-foss-2016a-easybuild-devel'
os.environ['EBROOTCURL'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a'
os.environ['EBVERSIONCURL'] = '7.47.0'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
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os.environ['PKG_CONFIG_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/share/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib/pkgconfig'
os.environ['_LMFILES_'] = '/etc/modulefiles/vsc/cluster/golett:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCCcore/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/binutils/2.25-GCCcore-4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCC/4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/numactl/2.0.11-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/hwloc/1.11.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenMPI/1.10.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/gompi/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/FFTW/3.3.4-gompi-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ncurses/6.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libreadline/6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/zlib/1.2.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libpng/1.6.21-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/NASM/2.11.08-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libjpeg-turbo/1.4.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/LibTIFF/4.0.6-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Java/1.8.0_92:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Tcl/8.6.5-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXau/1.0.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXdmcp/1.1.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libxcb/1.11.1-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libX11/1.6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/xtrans/1.3.5-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libICE/1.0.9-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libSM/1.2.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXt/1.1.5-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXext/1.3.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXrender/0.9.9-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/freetype/2.6.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/expat/2.1.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/fontconfig/2.11.94-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXft/2.3.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Tk/8.6.5-foss-2016a-libX11-1.6.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/cURL/7.47.0-foss-2016a'
; stderr:
== 2016-06-04 01:10:05,466 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:05,466 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:05,466 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:05,466 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:05,467 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:05,467 modules.py:607 DEBUG Running module command '/bin/modulecmd python load libxml2/2.9.3-foss-2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,499 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load libxml2/2.9.3-foss-2016a': stdout: os.environ['ACLOCAL_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/share/aclocal'
os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/include/freetype2:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['EBDEVELLIBXML2'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/easybuild/libxml2-2.9.3-foss-2016a-easybuild-devel'
os.environ['EBROOTLIBXML2'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a'
os.environ['EBVERSIONLIBXML2'] = '2.9.3'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib'
os.environ['LOADEDMODULES'] = 'cluster/golett:GCCcore/4.9.3:binutils/2.25-GCCcore-4.9.3:GCC/4.9.3-2.25:numactl/2.0.11-GCC-4.9.3-2.25:hwloc/1.11.2-GCC-4.9.3-2.25:OpenMPI/1.10.2-GCC-4.9.3-2.25:OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:gompi/2016a:FFTW/3.3.4-gompi-2016a:ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:foss/2016a:ncurses/6.0-foss-2016a:libreadline/6.3-foss-2016a:zlib/1.2.8-foss-2016a:libpng/1.6.21-foss-2016a:NASM/2.11.08-foss-2016a:libjpeg-turbo/1.4.2-foss-2016a:LibTIFF/4.0.6-foss-2016a:Java/1.8.0_92:Tcl/8.6.5-foss-2016a:libXau/1.0.8-foss-2016a:libXdmcp/1.1.2-foss-2016a:libxcb/1.11.1-foss-2016a:libX11/1.6.3-foss-2016a:xtrans/1.3.5-foss-2016a:libICE/1.0.9-foss-2016a:libSM/1.2.2-foss-2016a:libXt/1.1.5-foss-2016a:libXext/1.3.3-foss-2016a:libXrender/0.9.9-foss-2016a:freetype/2.6.2-foss-2016a:expat/2.1.0-foss-2016a:fontconfig/2.11.94-foss-2016a:libXft/2.3.2-foss-2016a:Tk/8.6.5-foss-2016a-libX11-1.6.3:cURL/7.47.0-foss-2016a:libxml2/2.9.3-foss-2016a'
os.environ['MANPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/share/man:/usr/share/man:/usr/local/share/man'
os.environ['PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/NASM/2.11.08-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/sbin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/bin:/user/home/gent/vsc400/vsc40023/lmod/6.3.4/libexec:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin'
os.environ['PKG_CONFIG_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/share/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib/pkgconfig:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib/pkgconfig'
os.environ['_LMFILES_'] = '/etc/modulefiles/vsc/cluster/golett:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCCcore/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/binutils/2.25-GCCcore-4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/GCC/4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/numactl/2.0.11-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/hwloc/1.11.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenMPI/1.10.2-GCC-4.9.3-2.25:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/gompi/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/FFTW/3.3.4-gompi-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/foss/2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/ncurses/6.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libreadline/6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/zlib/1.2.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libpng/1.6.21-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/NASM/2.11.08-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libjpeg-turbo/1.4.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/LibTIFF/4.0.6-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Java/1.8.0_92:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Tcl/8.6.5-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXau/1.0.8-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXdmcp/1.1.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libxcb/1.11.1-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libX11/1.6.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/xtrans/1.3.5-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libICE/1.0.9-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libSM/1.2.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXt/1.1.5-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXext/1.3.3-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXrender/0.9.9-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/freetype/2.6.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/expat/2.1.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/fontconfig/2.11.94-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libXft/2.3.2-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/Tk/8.6.5-foss-2016a-libX11-1.6.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/cURL/7.47.0-foss-2016a:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all/libxml2/2.9.3-foss-2016a'
; stderr:
== 2016-06-04 01:10:05,500 modules.py:641 DEBUG Correcting paths in $LD_LIBRARY_PATH from ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/lib'] to ['/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64', '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib']
== 2016-06-04 01:10:05,500 modules.py:641 DEBUG Correcting paths in $LD_PRELOAD from [''] to []
== 2016-06-04 01:10:05,500 modules.py:589 DEBUG Current MODULEPATH: /user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/modules/all:/etc/modulefiles/vsc
== 2016-06-04 01:10:05,501 modules.py:596 DEBUG Changing LD_LIBRARY_PATH from '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib/gcc/x86_64-unknown-linux-gnu/4.9.3:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/lib' to '' in environment for module command
== 2016-06-04 01:10:05,501 modules.py:596 DEBUG Changing LD_PRELOAD from '' to '' in environment for module command
== 2016-06-04 01:10:05,501 modules.py:607 DEBUG Running module command '/bin/modulecmd python load GDAL/2.1.0-foss-2016a' from /tmp/vsc40023/easybuild_build/R/3.3.0/foss-2016a/R-3.3.0
== 2016-06-04 01:10:05,741 modules.py:613 DEBUG Output of module command '/bin/modulecmd python load GDAL/2.1.0-foss-2016a': stdout: os.environ['ACLOCAL_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/guile/1.8.8-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/pkg-config/0.29-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtool/2.4.6-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/share/aclocal:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/share/aclocal'
os.environ['CPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GDAL/2.1.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/JasPer/1.900.1-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/gnutls/3.4.11-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/p11-kit/0.23.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libidn/1.32-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtasn1/4.7-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/guile/1.8.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libunistring/0.9.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtool/2.4.6-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/nettle/3.1.1-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GMP/6.1.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/PCRE/8.38-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/netCDF/4.4.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/HDF5/1.8.16-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Szip/2.1-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/include/freetype2:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/xtrans/1.3.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2.0.11-GCC-4.9.3-2.25/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/binutils/2.25-GCCcore-4.9.3/include:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GCCcore/4.9.3/include'
os.environ['EBDEVELGDAL'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GDAL/2.1.0-foss-2016a/easybuild/GDAL-2.1.0-foss-2016a-easybuild-devel'
os.environ['EBDEVELGMP'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GMP/6.1.0-foss-2016a/easybuild/GMP-6.1.0-foss-2016a-easybuild-devel'
os.environ['EBDEVELGNUTLS'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/gnutls/3.4.11-foss-2016a/easybuild/gnutls-3.4.11-foss-2016a-easybuild-devel'
os.environ['EBDEVELGUILE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/guile/1.8.8-foss-2016a/easybuild/guile-1.8.8-foss-2016a-easybuild-devel'
os.environ['EBDEVELJASPER'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/JasPer/1.900.1-foss-2016a/easybuild/JasPer-1.900.1-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBFFI'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libffi/3.2.1-foss-2016a/easybuild/libffi-3.2.1-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBIDN'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libidn/1.32-foss-2016a/easybuild/libidn-1.32-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBTASN1'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtasn1/4.7-foss-2016a/easybuild/libtasn1-4.7-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBTOOL'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtool/2.4.6-foss-2016a/easybuild/libtool-2.4.6-foss-2016a-easybuild-devel'
os.environ['EBDEVELLIBUNISTRING'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libunistring/0.9.3-foss-2016a/easybuild/libunistring-0.9.3-foss-2016a-easybuild-devel'
os.environ['EBDEVELM4'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/M4/1.4.17-foss-2016a/easybuild/M4-1.4.17-foss-2016a-easybuild-devel'
os.environ['EBDEVELNETTLE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/nettle/3.1.1-foss-2016a/easybuild/nettle-3.1.1-foss-2016a-easybuild-devel'
os.environ['EBDEVELP11MINKIT'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/p11-kit/0.23.2-foss-2016a/easybuild/p11-kit-0.23.2-foss-2016a-easybuild-devel'
os.environ['EBDEVELPCRE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/PCRE/8.38-foss-2016a/easybuild/PCRE-8.38-foss-2016a-easybuild-devel'
os.environ['EBDEVELPKGMINCONFIG'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/pkg-config/0.29-foss-2016a/easybuild/pkg-config-0.29-foss-2016a-easybuild-devel'
os.environ['EBROOTGDAL'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GDAL/2.1.0-foss-2016a'
os.environ['EBROOTGMP'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GMP/6.1.0-foss-2016a'
os.environ['EBROOTGNUTLS'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/gnutls/3.4.11-foss-2016a'
os.environ['EBROOTGUILE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/guile/1.8.8-foss-2016a'
os.environ['EBROOTJASPER'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/JasPer/1.900.1-foss-2016a'
os.environ['EBROOTLIBFFI'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libffi/3.2.1-foss-2016a'
os.environ['EBROOTLIBIDN'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libidn/1.32-foss-2016a'
os.environ['EBROOTLIBTASN1'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtasn1/4.7-foss-2016a'
os.environ['EBROOTLIBTOOL'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtool/2.4.6-foss-2016a'
os.environ['EBROOTLIBUNISTRING'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libunistring/0.9.3-foss-2016a'
os.environ['EBROOTM4'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/M4/1.4.17-foss-2016a'
os.environ['EBROOTNETTLE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/nettle/3.1.1-foss-2016a'
os.environ['EBROOTP11MINKIT'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/p11-kit/0.23.2-foss-2016a'
os.environ['EBROOTPCRE'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/PCRE/8.38-foss-2016a'
os.environ['EBROOTPKGMINCONFIG'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/pkg-config/0.29-foss-2016a'
os.environ['EBVERSIONGDAL'] = '2.1.0'
os.environ['EBVERSIONGMP'] = '6.1.0'
os.environ['EBVERSIONGNUTLS'] = '3.4.11'
os.environ['EBVERSIONGUILE'] = '1.8.8'
os.environ['EBVERSIONJASPER'] = '1.900.1'
os.environ['EBVERSIONLIBFFI'] = '3.2.1'
os.environ['EBVERSIONLIBIDN'] = '1.32'
os.environ['EBVERSIONLIBTASN1'] = '4.7'
os.environ['EBVERSIONLIBTOOL'] = '2.4.6'
os.environ['EBVERSIONLIBUNISTRING'] = '0.9.3'
os.environ['EBVERSIONM4'] = '1.4.17'
os.environ['EBVERSIONNETTLE'] = '3.1.1'
os.environ['EBVERSIONP11MINKIT'] = '0.23.2'
os.environ['EBVERSIONPCRE'] = '8.38'
os.environ['EBVERSIONPKGMINCONFIG'] = '0.29'
os.environ['LD_LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GDAL/2.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/JasPer/1.900.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/gnutls/3.4.11-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/p11-kit/0.23.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libidn/1.32-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtasn1/4.7-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/guile/1.8.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libunistring/0.9.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtool/2.4.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/nettle/3.1.1-foss-2016a/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GMP/6.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/PCRE/8.38-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libffi/3.2.1-foss-2016a/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libffi/3.2.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/netCDF/4.4.0-foss-2016a/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/HDF5/1.8.16-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Szip/2.1-foss-2016a/lib'
os.environ['LIBRARY_PATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GDAL/2.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/JasPer/1.900.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/gnutls/3.4.11-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/p11-kit/0.23.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libidn/1.32-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtasn1/4.7-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/guile/1.8.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libunistring/0.9.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtool/2.4.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/nettle/3.1.1-foss-2016a/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/GMP/6.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/PCRE/8.38-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libffi/3.2.1-foss-2016a/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libffi/3.2.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/netCDF/4.4.0-foss-2016a/lib64:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/HDF5/1.8.16-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Szip/2.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxml2/2.9.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/cURL/7.47.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tk/8.6.5-foss-2016a-libX11-1.6.3/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXft/2.3.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/fontconfig/2.11.94-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/expat/2.1.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/freetype/2.6.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXrender/0.9.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXext/1.3.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXt/1.1.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libSM/1.2.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libICE/1.0.9-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libX11/1.6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libxcb/1.11.1-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXdmcp/1.1.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libXau/1.0.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Tcl/8.6.5-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/Java/1.8.0_92/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/LibTIFF/4.0.6-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libjpeg-turbo/1.4.2-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libpng/1.6.21-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/zlib/1.2.8-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libreadline/6.3-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ncurses/6.0-foss-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/FFTW/3.3.4-gompi-2016a/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/OpenMPI/1.10.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/hwloc/1.11.2-GCC-4.9.3-2.25/lib:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/numactl/2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os.environ['LOADEDMODULES'] = 'cluster/golett:GCCcore/4.9.3:binutils/2.25-GCCcore-4.9.3:GCC/4.9.3-2.25:numactl/2.0.11-GCC-4.9.3-2.25:hwloc/1.11.2-GCC-4.9.3-2.25:OpenMPI/1.10.2-GCC-4.9.3-2.25:OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0:gompi/2016a:FFTW/3.3.4-gompi-2016a:ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0:foss/2016a:ncurses/6.0-foss-2016a:libreadline/6.3-foss-2016a:zlib/1.2.8-foss-2016a:libpng/1.6.21-foss-2016a:NASM/2.11.08-foss-2016a:libjpeg-turbo/1.4.2-foss-2016a:LibTIFF/4.0.6-foss-2016a:Java/1.8.0_92:Tcl/8.6.5-foss-2016a:libXau/1.0.8-foss-2016a:libXdmcp/1.1.2-foss-2016a:libxcb/1.11.1-foss-2016a:libX11/1.6.3-foss-2016a:xtrans/1.3.5-foss-2016a:libICE/1.0.9-foss-2016a:libSM/1.2.2-foss-2016a:libXt/1.1.5-foss-2016a:libXext/1.3.3-foss-2016a:libXrender/0.9.9-foss-2016a:freetype/2.6.2-foss-2016a:expat/2.1.0-foss-2016a:fontconfig/2.11.94-foss-2016a:libXft/2.3.2-foss-2016a:Tk/8.6.5-foss-2016a-libX11-1.6.3:cURL/7.47.0-foss-2016a:libxml2/2.9.3-foss-2016a:Szip/2.1-foss-2016a:HDF5/1.8.16-foss-2016a:netCDF/4.4.0-foss-2016a:libffi/3.2.1-foss-2016a:PCRE/8.38-foss-2016a:GMP/6.1.0-foss-2016a:nettle/3.1.1-foss-2016a:M4/1.4.17-foss-2016a:libtool/2.4.6-foss-2016a:libunistring/0.9.3-foss-2016a:pkg-config/0.29-foss-2016a:guile/1.8.8-foss-2016a:libtasn1/4.7-foss-2016a:libidn/1.32-foss-2016a:p11-kit/0.23.2-foss-2016a:gnutls/3.4.11-foss-2016a:JasPer/1.900.1-foss-2016a:GDAL/2.1.0-foss-2016a'
os.environ['MANPATH'] = '/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/JasPer/1.900.1-foss-2016a/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/gnutls/3.4.11-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libidn/1.32-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtasn1/4.7-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/guile/1.8.8-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/pkg-config/0.29-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/libtool/2.4.6-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/M4/1.4.17-foss-2016a/share/man:/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/CO7/haswell-ib/software/PCRE/8.38-foss-2016a/share/man:/user/scratch/gent/v
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