pnpm install
pnpm dev
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chr7 5563000 5573000 TxFlnk 10.26175 + | |
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<!DOCTYPE html> | |
<html lang="en"> | |
<head> | |
<meta charset="UTF-8" /> | |
<meta http-equiv="X-UA-Compatible" content="IE=edge" /> | |
<meta name="viewport" content="width=device-width, initial-scale=1.0" /> | |
<title>Client-side BED file upload test</title> | |
</head> |
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const PORT_NUMBER = 3000; | |
// Requiring express for routing | |
const express = require('express'); | |
// Creating app from express | |
const app = express(); | |
// Requiring in-built file system | |
const fs = require('fs'); |
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#!/usr/bin/perl -w | |
use strict; | |
# Utility to help format my notes, progress, results etc in atomic chunks, | |
# so they can be organized by project, data, technology, "todo" lists, etc. | |
if (@ARGV < 1) { | |
die " Usage: $0 <new | parse> \n"; | |
# Hidden optional arguments, not tested lately: [tag-list or +/-days]\n"; | |
} |
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p.todo { color:red; margin:0; padding:0; font-size:0.8em; } | |
p.done { color:green; margin:0; padding:0; font-size:0.7em; } | |
p.info { color:gray; margin:0; padding:0; font-size:0.8em; } | |
p.tags { color:gray; margin:0; padding:0; font-size:0.7em; } | |
p.cwd{ color:gray; margin:0; padding:0; font-size:0.8em; } | |
p.src { color:gray; margin:0; padding:0; font-size:0.8em; } | |
p.subject { color:black; margin:0; padding:0; font-size:1.5em; font-weight:bolder; } | |
.novel { color:green; font-weight:bolder; } | |
.xfac { color:#B80000; font-weight:bolder; } | |
.jaspar { color:#3399FF; font-weight:bolder; } |
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weblocal /home/areynolds/public_html | |
webroot /~areynolds | |
blogdir blog |
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#!/usr/bin/env python | |
import gzip | |
ASSEMBLY = "hg38" | |
chromosome_sizes = { "hg38" : | |
[ | |
{ | |
"name": 1, | |
"size": 248956422 |
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#!/usr/bin/env python | |
import sys | |
import math | |
import pandas as pd | |
import numpy as np | |
from scipy import stats | |
import json | |
from json import JSONEncoder | |
import zipfile |
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#!/usr/bin/env python | |
import subprocess | |
import sys | |
from os import listdir | |
from os.path import isfile, join | |
import time | |
# image, crop dimensions | |
img_dir = sys.argv[1] |
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