Created
July 30, 2021 22:06
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Calculate the integral of a 2d Gaussian using Latin Hypercube sampling
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{ | |
"cells": [ | |
{ | |
"cell_type": "code", | |
"execution_count": 1, | |
"id": "1fdb5f8a", | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"%matplotlib inline" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 2, | |
"id": "481b8e94", | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"from jax.scipy.stats import multivariate_normal\n", | |
"mu = np.zeros(2)\n", | |
"cov = np.eye(2)" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"id": "410bab62", | |
"metadata": {}, | |
"source": [ | |
"### Create a mesh grid spanning -5, 5 in each dimension" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 3, | |
"id": "b9cfc4fe", | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"(10000, 2)\n" | |
] | |
} | |
], | |
"source": [ | |
"npts_per_dim = 100\n", | |
"xh, yh = 5, 5\n", | |
"\n", | |
"xlo, xhi, nx = -xh, xh, npts_per_dim\n", | |
"ylo, yhi, ny = -yh, yh, npts_per_dim\n", | |
"dx = (xhi-xlo)/nx\n", | |
"dy = (yhi-ylo)/ny\n", | |
"\n", | |
"x = np.linspace(xlo, xhi, npts_per_dim+1)\n", | |
"y = np.linspace(ylo, yhi, npts_per_dim+1)\n", | |
"x, y = np.array(np.meshgrid(x[:-1], y[:-1]))\n", | |
"x, y = x.flatten(), y.flatten()\n", | |
"X_grid = np.vstack((x, y)).T\n", | |
"print(X_grid.shape)" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"id": "dd4b515b", | |
"metadata": {}, | |
"source": [ | |
"### Compute the grid sampling weight and do the Riemann integral" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 14, | |
"id": "24c8587c", | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"0.99999875\n" | |
] | |
} | |
], | |
"source": [ | |
"npts_grid_sampling = X_grid.shape[0]\n", | |
"AREA = (xhi-xlo)*(yhi-ylo)\n", | |
"norm_factor_grid = AREA / npts_grid_sampling\n", | |
"\n", | |
"gaussian_integral_grid = multivariate_normal.pdf(X_grid, mu, cov).sum()*norm_factor_grid\n", | |
"print(gaussian_integral_grid)" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"id": "290c61e1", | |
"metadata": {}, | |
"source": [ | |
"### Create a latin hypercube" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 19, | |
"id": "fab05caa", | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"from scipy.stats.qmc import LatinHypercube\n", | |
"LH = LatinHypercube(X_grid.shape[1])\n", | |
"npts_lh_sampling = npts_grid_sampling\n", | |
"U_LH = LH.random(npts_lh_sampling)\n", | |
"X_LH = np.zeros_like(U_LH)\n", | |
"X_LH[:, 0] = (U_LH[:, 0] - 0.5)*(xhi-xlo)\n", | |
"X_LH[:, 1] = (U_LH[:, 1] - 0.5)*(yhi-ylo)" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"id": "f0ae32af", | |
"metadata": {}, | |
"source": [ | |
"### Compute the LH sampling weight and do the Riemann integral" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 20, | |
"id": "ebfca950", | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"1.0012085\n" | |
] | |
} | |
], | |
"source": [ | |
"norm_factor_lhs = AREA / npts_lh_sampling\n", | |
"\n", | |
"gaussian_integral_lhs = multivariate_normal.pdf(X_LH, mu, cov).sum()*norm_factor_lhs\n", | |
"print(gaussian_integral_lhs)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"id": "030b8d8d", | |
"metadata": {}, | |
"outputs": [], | |
"source": [] | |
} | |
], | |
"metadata": { | |
"kernelspec": { | |
"display_name": "Python 3 (ipykernel)", | |
"language": "python", | |
"name": "python3" | |
}, | |
"language_info": { | |
"codemirror_mode": { | |
"name": "ipython", | |
"version": 3 | |
}, | |
"file_extension": ".py", | |
"mimetype": "text/x-python", | |
"name": "python", | |
"nbconvert_exporter": "python", | |
"pygments_lexer": "ipython3", | |
"version": "3.9.6" | |
} | |
}, | |
"nbformat": 4, | |
"nbformat_minor": 5 | |
} |
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