I hereby claim:
- I am ar0ch on github.
- I am arch (https://keybase.io/arch) on keybase.
- I have a public key whose fingerprint is 0DED DFD3 2FDF 7B78 C66C 6FA2 43B4 7A53 432D E7B0
To claim this, I am signing this object:
I hereby claim:
To claim this, I am signing this object:
################################ | |
# GitLab email server settings # | |
################################ | |
# see https://gitlab.com/gitlab-org/omnibus-gitlab/blob/629def0a7a26e7c2326566f0758d4a27857b52a3/doc/settings/smtp.md#smtp-settings | |
# Use smtp instead of sendmail/postfix. | |
gitlab_rails['smtp_enable'] = true | |
gitlab_rails['smtp_address'] = "smtp.mailgun.org" | |
gitlab_rails['smtp_port'] = 587 | |
gitlab_rails['smtp_authentication'] = "plain" | |
gitlab_rails['smtp_enable_starttls_auto'] = true |
#!/bin/bash | |
j=$(basename $1) | |
/usr/bin/makeblastdb -in $1 -dbtype $2 -title $j | |
killall sequenceserver | |
/usr/bin/screen -dmS ss /usr/local/bin/sequenceserver -d=/home//blast/public/blast/ -H 127.0.0.1 -p 4567 > /dev/null | |
exit |
#!/bin/bash | |
for a in *;do; | |
echo $a;cd $a; | |
for i in *.faa;do; | |
j=`echo $i | cut -d. -f1`; | |
for k in *.faa;do; | |
l=`echo $k | cut -d. -f1`; | |
water -asequence $i -bsequence $k -datafile EBLOSUM60 -gapopen 10 -gapextend 0.5 -outfile $j.$l -nobrief > /dev/null 2>&1; | |
sed -i s/\#//g $j.$l; | |
awk 'FNR == 19{printf $2" "}; FNR==26{print $2" "}; FNR==20{printf $2" "}' $j.$l | tr -d '()' | sed s'|/| |'g > $j.$l.tmp; |
>abcZ_abcZ_254 | |
TTTGATACCGTTGCCGAAGGTTTGGGTGAAATTCGCGATTTATTGCGCCGTTATCATCATGTCAGCCATGAGTTGGAAAA | |
CGGTTCGGGTGAGGCTTTGTTGAAAGAACTCAACGAATTACAACTTGAAATCGAAGCGAAGGACGGCTGGAAGCTGGATG | |
CGGCAGTCAAGCAGACTTTGGGGGAACTCGGTTTGCCGGAAAACGAAAAAATCGGCAACCTTTCCGGCGGTCAGAAAAAG | |
CGTGTCGCCTTGGCGCAGGCTTGGGTGCAGAAGCCCGACGTATTGCTGCTGGACGAACCGACCAACCATTTGGATATCGA | |
CGCGATTATTTGGCTGGAAAATCTGCTCAAAGCGTTTGAAGGCAGCTTGGTTGTGATTACCCACGACCGCCGTTTTTTGG | |
ACAATATCGCCACGCGGATTGTCGAACTCGATC | |
>adk_adk_92 | |
GAAGCGAAAAAAATCATTGACGAAGGCGGCTTGGTGCGCGACGACATCATTATCGGCATGGTCAAAGAACGCATCGCGCA | |
AGACGACTGCAAAAACGGTTTCCTGTTTGACGGTTTCCCGCGCACATTGGCACAAGCCGAAGCGATGGTTGAAGCAGGCG |
staticperl mkperl -MConfig::Simple -MPod::Usage -MGetopt::Long -MFile::Path -Mwarnings --use Config_heavy.pl -v --add "abil/nasp.pm" -v |
From 96c2f53e77c6898132fb0e6c89ce4433a35c31bc Mon Sep 17 00:00:00 2001 | |
From: Aroon Chande <git@atc.io> | |
Date: Tue, 24 Oct 2017 09:52:30 -0400 | |
Subject: [PATCH] Update Unicycler | |
- Add racon and miniasm run dependencies | |
- Set py27 incompatible | |
--- | |
recipes/unicycler/meta.yaml | 8 +++++--- | |
1 files changed, 5 insertions(+), 3 deletions(-) |
>Illumina_DpnII_expression_PCR_Primer_2 | |
AATGATACGGCGACCACCGACAGGTTCAGAGTTCTACAGTCCGA | |
>Illumina_Single_End_Sequencing_Primer | |
ACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>custom3 | |
AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT | |
>Illumina_DpnII_expression_Sequencing_Primer | |
CGACAGGTTCAGAGTTCTACAGTCCGACGATC | |
>Illumina_Multiplexing_PCR_Primer_2.01 | |
GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT |
>NC_011283.1:1770808-1774323 | |
atgtccggaaacatgaaaacaatggatggcaacacggcggcggcctggatctcctacgcc | |
tttaccgacgtggcggccatctaccccatcaccccctccacgccgatggcggaaaatgtc | |
gatgaatgggccgctaaggggaaaaagaatctgtttggccagccggtgcgcctgatggag | |
atgcaatccgaagccggtgccgccggggcggtgcacggcgcgctgcaggcgggagcgctc | |
accaccacctacaccgcgtcgcaggggctgctgctgatgatccccaatttgtacaaaatt | |
gccggtgaactgctgccgggtgtttttcacgtcagcgcgcgggcgctggcgaccaattcg | |
ctgaatatttttggcgaccaccaggacgtgatggcggtacggcagaccggctgcgccatg | |
ctggtggagaataacgttcagcaggtgatggacctgtcggcggtggcgcacctggcggcg | |
atcgccgggcggatcccgtttatcaactttttcgacggctttcgcacctcgcacgaaata |
>NC_011283.1 | |
gttcgagtggagtccgccgtgtcactttcgctttggcagcagtgtcttgc | |
ccgattgcaggatgagttaccagccacagaattcagcatgtggatccgcc | |
cattgcaggcggaactgagcgataacacgctggcactgtatgcgccaaac | |
cgttttgtgctcgactgggtaagggacaaatacctcaataatatcaatgg | |
actcctcaatgacttttgcggtgctgatgccccgcagctgcgttttgagg | |
tgggtgctaagccagccagctcgctgcagaaaggagcggtaagcccggct | |
gcggcggccattccggcggcgcaggtgcagaccgcgcgcgtggcgccgac | |
gatcgtgcgcccaggctgggataatgtcccggcgccagcggagccgacct | |
accgctctaacgttaacgtgaaacacacgtttgataacttcgtcgaaggt |