awwsmm

/*
 * Copyright (c) 2009-2017, Peter Abeles. All Rights Reserved.
 *
 * Translated from Java to Scala by Andrew Watson, Jan 2018.
 *
 * This file is part of Efficient Java Matrix Library (EJML).
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at

awwsmm

import java.util.Collection;
import java.util.HashSet;
import java.util.List;
import java.util.ArrayList;
import java.lang.reflect.Array;
import java.util.Iterator;

// this class has two constructors:
//   1. takes a generic array and assigns it to a generic array
//   2. takes a generic collection and assigns it to a "generic" array

awwsmm

  ##----------------------------------------------------------------------------
  ##
  ##  functions to find and replace within multiple files or in file names
  ##
  ##----------------------------------------------------------------------------

  # if dir, return dir; if symlink, return dir that symlink points to
  function unsym(){
    echo "$(python -c "import os; print(os.path.realpath('"$1"'))")"
  }

awwsmm

@echo off

setlocal enabledelayedexpansion
set first=1

set tmpFile=merged.csv.tmp
set outFile=merged.csv

if exist "%tmpFile%" del "%tmpFile%"
if exist "%outFile%" del "%outFile%"

awwsmm

@echo off

setlocal enabledelayedexpansion
set row=0

set inFile=merged.csv
set outFile=final.csv

if exist "%outFile%" del "%outFile%"

awwsmm

import java.util.ArrayList;
import java.util.regex.Matcher;
import java.util.regex.Pattern;

public class SimplestCSVParser {

  // private constructor -- utility class
  private SimplestCSVParser(){}

  // where the magic happens

awwsmm

import java.io.BufferedInputStream;
import java.io.FileInputStream;
import java.io.InputStream;
import java.io.IOException;

// NOTE: adapted from http://bit.ly/2LOQwIP

public class CountLines {

  // private constructor in utility class

awwsmm

import java.io.File;
import java.io.FileNotFoundException;
import java.io.IOException;
import java.io.RandomAccessFile;

import org.apache.poi.ss.usermodel.Cell;
import org.apache.poi.ss.usermodel.DataFormatter;
import org.apache.poi.ss.usermodel.FormulaEvaluator;
import org.apache.poi.ss.usermodel.Row;
import org.apache.poi.ss.usermodel.Sheet;

awwsmm

import java.io.FileInputStream;
import java.io.IOException;
import java.util.Properties;

// Compile and then run! Change the settings.conf file and rerun without recompiling!
// Settings are updated without needing to recompile.

public class Settings {

  public static boolean DEBUG = false;

awwsmm

import java.io.BufferedReader;
import java.io.FileInputStream;
import java.io.FileNotFoundException;
import java.io.IOException;
import java.io.InputStreamReader;

public class Entries {

  public static void main (String[] args) {