Bernd Weiss berndweiss

## aREADME.rst

      
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                berndweiss
                / aREADME.rst
            
            
              Created
              October 7, 2012 07:33
                — forked from leetrout/aREADME.rst
            
              
                Clone all your github repos into a local directory
              
          
    USAGE

python ghclone.py

Follow the prompts
Notes


## Hmisc_bezier.R
doInstall <- TRUE
toInstall <- c("Hmisc", "ggplot2", "proxy", "grid")
if(doInstall){install.packages(toInstall, repos = "http://cran.us.r-project.org")}
lapply(toInstall, library, character.only = TRUE)

# Example usage
x <- c(4,6,4,5,6,7)
y <- 1:6
plot(x, y, "o", pch=20)  # bezier() generates smoothed curves from these points
points(bezier(x, y), type="l", col="red")

## Makefile
RMDFILE=demo-rmd-pandoc
PANDOC=~/.cabal/bin/pandoc

all:
	Rscript -e "require(knitr); require(markdown); knit('$(RMDFILE).rmd', '$(RMDFILE).md'); purl('$(RMDFILE).rmd')"
	${PANDOC} --mathjax --toc -B header.html -A footer.html --bibliography refs.bib --css markdown.css -s $(RMDFILE).md -o $(RMDFILE).html


## lmm
library(ggplot2)
library(lme4)
library(mvtnorm)

fixed.intercept <- 1
n.subject <- 10
n.replicate <- 10
mean.subject <- c(1, 2, 3, 3, 2, 1)
sd.subject <- 0.1 * diag(length(mean.subject))
sd.noise <- 0.5

## Directed Acyclic Graphs in LaTeX using TikZ
\documentclass[]{article}
\usepackage{tikz}
\usetikzlibrary{positioning}

\begin{document}

%Graph 1
\begin{figure}
	\caption{Graph 1}
	\large{\begin{tikzpicture}[%

## .bash_aliases
#  Customize BASH PS1 prompt to show current GIT repository and branch.
#  by Mike Stewart - http://MediaDoneRight.com

#  SETUP CONSTANTS
#  Bunch-o-predefined colors.  Makes reading code easier than escape sequences.
#  I don't remember where I found this.  o_O

# Reset
Color_Off="\[\033[0m\]"       # Text Reset
	doInstall <- TRUE
	toInstall <- c("Hmisc", "ggplot2", "proxy", "grid")
	if(doInstall){install.packages(toInstall, repos = "http://cran.us.r-project.org")}
	lapply(toInstall, library, character.only = TRUE)

	# Example usage
	x <- c(4,6,4,5,6,7)
	y <- 1:6
	plot(x, y, "o", pch=20) # bezier() generates smoothed curves from these points
	points(bezier(x, y), type="l", col="red")
	RMDFILE=demo-rmd-pandoc
	PANDOC=~/.cabal/bin/pandoc

	all:
	Rscript -e "require(knitr); require(markdown); knit('$(RMDFILE).rmd', '$(RMDFILE).md'); purl('$(RMDFILE).rmd')"
	${PANDOC} --mathjax --toc -B header.html -A footer.html --bibliography refs.bib --css markdown.css -s $(RMDFILE).md -o $(RMDFILE).html
	library(ggplot2)
	library(lme4)
	library(mvtnorm)

	fixed.intercept <- 1
	n.subject <- 10
	n.replicate <- 10
	mean.subject <- c(1, 2, 3, 3, 2, 1)
	sd.subject <- 0.1 * diag(length(mean.subject))
	sd.noise <- 0.5
	\documentclass[]{article}
	\usepackage{tikz}
	\usetikzlibrary{positioning}

	\begin{document}

	%Graph 1
	\begin{figure}
	\caption{Graph 1}
	\large{\begin{tikzpicture}[%
	# Customize BASH PS1 prompt to show current GIT repository and branch.
	# by Mike Stewart - http://MediaDoneRight.com

	# SETUP CONSTANTS
	# Bunch-o-predefined colors. Makes reading code easier than escape sequences.
	# I don't remember where I found this. o_O

	# Reset
	Color_Off="\[\033[0m\]" # Text Reset