| #Install prerequisites | |
| sudo aptitude install ghc darcs zlib1g-dev libncurses5-dev | |
| #Get GHC 7.4.1 source and cabal-install HEAD | |
| wget http://www.haskell.org/ghc/dist/7.4.1/ghc-7.4.1-src.tar.bz2 | |
| darcs get --lazy http://darcs.haskell.org/cabal/ | |
| tar xjf ghc-7.4.1-src.tar.bz2 | |
| cd ghc-7.4.1 | |
| ./configure --prefix=$HOME/src/ghc | |
| time make -j9 #Only took me about 19 minutes on recent quad core xeon |
| function stress0(N::Int) | |
| x = Dict{Int,Float64}() | |
| for i = 1:N | |
| x[i] = 0.0 | |
| end | |
| return x | |
| end | |
| function stress0prime(N::Int) | |
| x = Dict{Int,Float64}(N) |
| from timeit import timeit | |
| A = timeit(setup = 'import test,random; n = range(10**6)', stmt = 'test.stress1(n)', | |
| number=5) / 5.0 | |
| B = timeit(setup = 'import test,random; n = range(10**6); random.shuffle(n)', | |
| stmt = 'test.stress1(n)', | |
| number=5) / 5.0 | |
| C = timeit(setup='import test,random; n = [random.randint(0,100) for i in range(10**6)]', | |
| stmt = 'test.stress1(n)', | |
| number=5) / 5.0 |
| require("fancy") | |
| using Fancy | |
| do_fancy(100) | |
| Fancy.@profile report |
| require("profile") | |
| using Profile | |
| @profile begin | |
| ############################################################################## | |
| # | |
| # Low-level text parsing | |
| # | |
| ############################################################################## | |
| # Implements a very simple two-state machine that splits *-separated |
| javascript:(function(e,a,g,h,f,c,b,d)%7Bif(!(f=e.jQuery)%7C%7Cg%3Ef.fn.jquery%7C%7Ch(f))%7Bc=a.createElement(%22script%22);c.type=%22text/javascript%22;c.src=%22http://ajax.googleapis.com/ajax/libs/jquery/%22+g+%22/jquery.min.js%22;c.onload=c.onreadystatechange=function()%7Bif(!b&&(!(d=this.readyState)%7C%7Cd==%22loaded%22%7C%7Cd==%22complete%22))%7Bh((f=e.jQuery).noConflict(1),b=1);f(c).remove()%7D%7D;a.documentElement.childNodes%5B0%5D.appendChild(c)%7D%7D)(window,document,%221.3.2%22,function($,L)%7B$('%23header,%20.pagehead,%20.breadcrumb,%20.commit,%20.meta,%20%23footer,%20%23footer-push,%20.wiki-actions,%20%23last-edit,%20.actions,%20.header').remove();%20$('%23files,%20.file').css(%7B%22background%22:%22none%22,%20%22border%22:%22none%22%7D);%20$('link').removeAttr('media');%7D); |
cat test.fastq 2>&3 0.00s user 0.17s system 98% cpu 0.171 total
cat test.fastq 2>&3 0.00s user 0.16s system 97% cpu 0.164 total
gzip -c test.fastq 2>&3 84.22s user 0.19s system 99% cpu 1:24.59 total
gzip -c test.fastq 2>&3 96.61s user 0.96s system 94% cpu 1:43.75 total
pigz -c test.fastq 2>&3 88.85s user 0.34s system 1181% cpu 7.546 total
lbzip2 -c test.fastq 2>&3 91.08s user 3.01s system 1142% cpu 8.238 total
bzip2 -c test.fastq 2>&3 93.33s user 0.22s system 99% cpu 1:33.77 total
| function read_buf(fname::ASCIIString, copybuf::Bool) | |
| fsize = filesize(fname) | |
| fid = open(fname) | |
| line = 0 | |
| reads = 0 | |
| bufsize = 4096 | |
| buf = zeros(Uint8, bufsize) | |
| mydata = zeros(Uint8, bufsize) | |
| while position(fid) < (fsize-bufsize) | |
| read(fid, buf) |
| src/s_cpow.c.o: In function `__signbitf': | |
| s_cpow.c:(.text+0x0): multiple definition of `__signbitf' | |
| src/s_signbit.c.o:s_signbit.c:(.text+0x10): first defined here | |
| src/s_cpow.c.o: In function `__signbit': | |
| s_cpow.c:(.text+0x10): multiple definition of `__signbit' | |
| src/s_signbit.c.o:s_signbit.c:(.text+0x0): first defined here | |
| /usr/bin/ld: Warning: size of symbol `__signbit' changed from 16 in src/s_signbit.c.o to 19 in src/s_cpow.c.o | |
| src/s_cpow.c.o: In function `__signbitl': | |
| s_cpow.c:(.text+0x30): multiple definition of `__signbitl' | |
| src/s_signbit.c.o:s_signbit.c:(.text+0x20): first defined here |
| execve("./julia", ["./julia"], [/* 33 vars */]) = 0 | |
| brk(0) = 0x173f6000 | |
| mmap(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0x2aaaaaaab000 | |
| uname({sys="Linux", node="compute-0-1.local", ...}) = 0 | |
| readlink("/proc/self/exe", "/home/jason/src/julia/usr/bin/ju"..., 4096) = 52 | |
| access("/etc/ld.so.preload", R_OK) = -1 ENOENT (No such file or directory) | |
| open("/home/jason/src/julia/usr/bin/../lib/julia/tls/x86_64/libncurses.so.5", O_RDONLY) = -1 ENOENT (No such file or directory) | |
| stat("/home/jason/src/julia/usr/bin/../lib/julia/tls/x86_64", 0x7fff0455e040) = -1 ENOENT (No such file or directory) | |
| open("/home/jason/src/julia/usr/bin/../lib/julia/tls/libncurses.so.5", O_RDONLY) = -1 ENOENT (No such file or directory) | |
| stat("/home/jason/src/julia/usr/bin/../lib/julia/tls", 0x7fff0455e040) = -1 ENOENT (No such file or directory) |