Skip to content

Instantly share code, notes, and snippets.

View boegel's full-sized avatar

Kenneth Hoste boegel

View GitHub Profile
@boegel
boegel / easybuild_test_report_easyconfigs_pr1915_20152925-UTC-20-29-30.md
Created August 25, 2015 20:29
EasyBuild test report for easyconfigs PR #1915

Test report for easybuilders/easybuild-easyconfigs#1915

Test result

Build succeeded for 2 out of 2 (2 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS sympy-0.7.6-intel-2015a-Python-2.7.9.eb
  • SUCCESS sympy-0.7.6-intel-2015a-Python-2.7.10.eb

Time info

@boegel
boegel / easybuild_test_report_easyconfigs_pr1915_20151225-UTC-21-12-08.md
Created August 25, 2015 21:12
EasyBuild test report for easyconfigs PR #1915

Test report for easybuilders/easybuild-easyconfigs#1915

Test result

Build succeeded for 2 out of 2 (2 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS sympy-0.7.6-intel-2015a-Python-2.7.9.eb
  • SUCCESS sympy-0.7.6-intel-2015a-Python-2.7.10.eb

Time info

@boegel
boegel / easybuild_test_report_easyconfigs_pr1916_20150826-UTC-09-08-59.md
Created August 26, 2015 09:09
EasyBuild test report for easyconfigs PR #1916

Test report for easybuilders/easybuild-easyconfigs#1916

Test result

Build succeeded for 1 out of 1 (1 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS FoldX-3.0-beta6.1.eb

Time info

  • start: Wed, 26 Aug 2015 09:08:40 +0000 (UTC)
@boegel
boegel / easybuild_test_report_easyconfigs_pr1917_20152026-UTC-11-20-42.md
Created August 26, 2015 11:20
EasyBuild test report for easyconfigs PR #1917

Test report for easybuilders/easybuild-easyconfigs#1917

Test result

Build succeeded for 2 out of 2 (2 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS R-bundle-Bioconductor-3.1-intel-2015a-R-3.2.1.eb
  • SUCCESS R-bundle-Bioconductor-3.1-goolf-1.7.20-R-3.2.0.eb

Time info

@boegel
boegel / Boost-1.55.0-goolf-1.7.20-Python-2.7.9_partial.log
Created August 26, 2015 11:57
(partial) EasyBuild log for failed build of /local/1692575[1913].master15.delcatty.gent.vsc/eb-aeNJ9T/files_pr1913/Boost-1.55.0-goolf-1.7.20-Python-2.7.9.eb (PR #1913)
== 2015-08-26 12:33:51,981 main.environment DEBUG Key in old environment found that is not in new one: SCALAPACK_LIB_DIR (/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/SL6/sandybridge/software/ScaLAPACK/2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0/lib)
== 2015-08-26 12:33:51,981 main.environment DEBUG Key in old environment found that is not in new one: FFTW_INC_DIR (/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/SL6/sandybridge/software/FFTW/3.3.4-gompi-1.7.20/include)
== 2015-08-26 12:33:51,981 main.environment DEBUG Key in old environment found that is not in new one: EBVARFFT_STATIC_LIBS (libfftw3_mpi.a,libfftw3.a)
== 2015-08-26 12:33:51,982 main.environment DEBUG Key in old environment found that is not in new one: LIBSCALAPACK_MT (-lscalapack -lopenblas -lpthread -lgfortran)
== 2015-08-26 12:33:51,982 main.environment DEBUG Key in old environment found that is not in new one: F90FLAGS (-fPIC -O2 -march=native)
== 2015-08-26 12:33:51,982 main.environment DEBUG Key in old environment found
@boegel
boegel / Boost-1.58.0-goolf-1.7.20-Python-2.7.10_partial.log
Created August 26, 2015 11:57
(partial) EasyBuild log for failed build of /local/1692575[1913].master15.delcatty.gent.vsc/eb-aeNJ9T/files_pr1913/Boost-1.58.0-goolf-1.7.20-Python-2.7.10.eb (PR #1913)
== 2015-08-26 13:57:36,011 main.environment DEBUG Key in old environment found that is not in new one: EBVARPRECFLAGS ()
== 2015-08-26 13:57:36,011 main.environment DEBUG Key in old environment found that is not in new one: EBVARFFT_STATIC_LIBS (libfftw3_mpi.a,libfftw3.a)
== 2015-08-26 13:57:36,012 main.environment DEBUG Key in old environment found that is not in new one: BLAS_LIB_DIR (/user/scratch/gent/vsc400/vsc40023/easybuild_REGTEST/SL6/sandybridge/software/OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0/lib)
== 2015-08-26 13:57:36,012 main.environment DEBUG Key in old environment found that is not in new one: CC_SEQ (gcc)
== 2015-08-26 13:57:36,012 main.environment DEBUG Key in old environment found that is not in new one: EBVARLIBSCALAPACK_MT_ONLY (-lscalapack -lgfortran)
== 2015-08-26 13:57:36,012 main.environment DEBUG Key in old environment found that is not in new one: LIBLAPACK_MT_ONLY (-lopenblas -lgfortran)
== 2015-08-26 13:57:36,012 main.environment DEBUG Key in old environment found that is not in new
@boegel
boegel / easybuild_test_report_easyconfigs_pr1913_20155726-UTC-11-57-40.md
Created August 26, 2015 11:57
EasyBuild test report for easyconfigs PR #1913

Test report for easybuilders/easybuild-easyconfigs#1913

Test result

Build succeeded for 10 out of 12 (12 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS Xerces-C++-3.1.2-intel-2015a.eb
  • SUCCESS Xerces-C++-3.1.2-goolf-1.7.20.eb
  • SUCCESS GMP-6.0.0a-GCC-4.8.4.eb
  • FAIL (build issue) Boost-1.55.0-goolf-1.7.20-Python-2.7.9.eb (partial log available at https://gist.github.com/9fd536119e435c802d11)
@boegel
boegel / netCDF-4.3.3.1-intel-2015a_partial.log
Created August 27, 2015 08:38
(partial) EasyBuild log for failed build of /tmp/eb-XJg6nS/files_pr1912/netCDF-4.3.3.1-intel-2015a.eb (PR #1912)
vtls/openssl.c:(.text+0x5ccb): undefined reference to `ENGINE_get_id'
vtls/openssl.c:(.text+0x5cf4): undefined reference to `ENGINE_get_id'
/gpfs/scratch/projects/project_gpilot/vsc40023/software/cURL/7.43.0-intel-2015a/lib/libcurl.a(libcurl_la-openssl.o): In function `Curl_ossl_init':
vtls/openssl.c:(.text+0x5d25): undefined reference to `OPENSSL_load_builtin_modules'
vtls/openssl.c:(.text+0x5d2a): undefined reference to `ENGINE_load_builtin_engines'
vtls/openssl.c:(.text+0x5d2f): undefined reference to `SSL_load_error_strings'
vtls/openssl.c:(.text+0x5d34): undefined reference to `SSL_library_init'
vtls/openssl.c:(.text+0x5d44): undefined reference to `OPENSSL_add_all_algorithms_noconf'
vtls/openssl.c:(.text+0x5d52): undefined reference to `CONF_modules_load_file'
/gpfs/scratch/projects/project_gpilot/vsc40023/software/cURL/7.43.0-intel-2015a/lib/libcurl.a(libcurl_la-md5.o): In function `Curl_md5it':
@boegel
boegel / easybuild_test_report_easyconfigs_pr1912_20153827-UTC-08-38-36.md
Created August 27, 2015 08:38
EasyBuild test report for easyconfigs PR #1912
$ grep "Linking against" /tmp/eb-XJg6nS/easybuild-netCDF-4.3.3.1-20150827.103137.prsrd.log
-- Linking against: /gpfs/scratch/projects/project_gpilot/vsc40023/software/HDF5/1.8.15-intel-2015a/lib/libhdf5_hl.a;/gpfs/scratch/projects/project_gpilot/vsc40023/software/HDF5/1.8.15-intel-2015a/lib/libhdf5.a;/gpfs/scratch/projects/project_gpilot/vsc40023/software/Szip/2.1-intel-2015a/lib/libsz.a;/gpfs/scratch/projects/project_gpilot/vsc40023/software/zlib/1.2.8-intel-2015a/lib/libz.a;/usr/lib64/libdl.a;/usr/lib64/libm.a;/gpfs/scratch/projects/project_gpilot/vsc40023/software/icc/2015.1.133-GCC-4.9.2/lib/intel64/libiomp5.a;/usr/lib64/libpthread.a;/usr/lib64/libdl.so;/usr/lib64/libm.so;/usr/lib64/libz.so;/gpfs/scratch/projects/project_gpilot/vsc40023/software/cURL/7.43.0-intel-2015a/lib/libcurl.a
-- Linking against: /gpfs/scratch/projects/project_gpilot/vsc40023/software/HDF5/1.8.15-intel-2015a/lib/libhdf5_hl.a;/gpfs/scratch/projects/project_gpilot/vsc40023/software/HDF5/1.8.15-intel-2015a/lib/libhdf5.a;/gpfs