Created
October 27, 2018 17:15
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(partial) EasyBuild log for failed build of /local/798783X7040X.master21.swalot.gent.vsc/eb-LF1Nnw/files_pr7040/n/Normaliz/Normaliz-3.6.3-intel-2018b.eb (PR #7040)
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| == 2018-10-27 19:12:27,874 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/compiler/lib/intel64 was not found | |
| == 2018-10-27 19:12:27,877 toolchain.py:294 DEBUG get_software_root software root /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b for imkl was found in environment | |
| == 2018-10-27 19:12:27,877 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/include was not found | |
| == 2018-10-27 19:12:27,877 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/lib64 was not found | |
| == 2018-10-27 19:12:27,878 toolchain.py:294 DEBUG get_software_root software root /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b for imkl was found in environment | |
| == 2018-10-27 19:12:27,879 toolchain.py:294 DEBUG get_software_root software root /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b for imkl was found in environment | |
| == 2018-10-27 19:12:27,879 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/include was not found | |
| == 2018-10-27 19:12:27,879 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/lib64 was not found | |
| == 2018-10-27 19:12:27,879 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/compiler/lib/intel64 was not found | |
| == 2018-10-27 19:12:27,879 toolchain.py:303 DEBUG get_software_version software version 2018.3.222 for imkl was found in environment | |
| == 2018-10-27 19:12:27,881 toolchain.py:294 DEBUG get_software_root software root /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b for imkl was found in environment | |
| == 2018-10-27 19:12:27,882 toolchain.py:294 DEBUG get_software_root software root /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b for imkl was found in environment | |
| == 2018-10-27 19:12:27,882 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/include was not found | |
| == 2018-10-27 19:12:27,882 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/lib64 was not found | |
| == 2018-10-27 19:12:27,883 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/compiler/lib/intel64 was not found | |
| == 2018-10-27 19:12:27,883 intelfftw.py:83 DEBUG fftw_libs ['fftw3xc_intel'] | |
| == 2018-10-27 19:12:27,883 intelfftw.py:85 DEBUG fftw_libs ['fftw3xc_intel', 'mkl_intel_lp64', 'mkl_sequential', 'mkl_core'] | |
| == 2018-10-27 19:12:27,886 toolchain.py:294 DEBUG get_software_root software root /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b for imkl was found in environment | |
| == 2018-10-27 19:12:27,886 toolchain.py:294 DEBUG get_software_root software root /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b for imkl was found in environment | |
| == 2018-10-27 19:12:27,886 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/include was not found | |
| == 2018-10-27 19:12:27,887 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/lib64 was not found | |
| == 2018-10-27 19:12:27,887 toolchain.py:706 DEBUG prepare: set additional variables onlymod=False | |
| == 2018-10-27 19:12:27,888 toolchain.py:294 DEBUG get_software_root software root /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0 for GMP was found in environment | |
| == 2018-10-27 19:12:27,888 variables.py:201 WARNING flags_for_subdirs: directory /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/lib64 was not found | |
| == 2018-10-27 19:12:27,892 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLACS_INC_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include | |
| == 2018-10-27 19:12:27,892 environment.py:97 INFO Environment variable BLACS_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include (previously undefined) | |
| == 2018-10-27 19:12:27,892 environment.py:97 INFO Environment variable EBVARBLACS_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include (previously undefined) | |
| == 2018-10-27 19:12:27,892 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLACS_LIB_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 | |
| == 2018-10-27 19:12:27,892 environment.py:97 INFO Environment variable BLACS_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,892 environment.py:97 INFO Environment variable EBVARBLACS_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,892 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLACS_MT_STATIC_LIBS to libmkl_blacs_intelmpi_lp64.a | |
| == 2018-10-27 19:12:27,893 environment.py:97 INFO Environment variable BLACS_MT_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined) | |
| == 2018-10-27 19:12:27,893 environment.py:97 INFO Environment variable EBVARBLACS_MT_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined) | |
| == 2018-10-27 19:12:27,893 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLACS_STATIC_LIBS to libmkl_blacs_intelmpi_lp64.a | |
| == 2018-10-27 19:12:27,893 environment.py:97 INFO Environment variable BLACS_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined) | |
| == 2018-10-27 19:12:27,893 environment.py:97 INFO Environment variable EBVARBLACS_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined) | |
| == 2018-10-27 19:12:27,893 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLAS_INC_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include | |
| == 2018-10-27 19:12:27,893 environment.py:97 INFO Environment variable BLAS_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include (previously undefined) | |
| == 2018-10-27 19:12:27,893 environment.py:97 INFO Environment variable EBVARBLAS_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include (previously undefined) | |
| == 2018-10-27 19:12:27,893 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_INC_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include | |
| == 2018-10-27 19:12:27,893 environment.py:97 INFO Environment variable BLAS_LAPACK_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include (previously undefined) | |
| == 2018-10-27 19:12:27,893 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include (previously undefined) | |
| == 2018-10-27 19:12:27,894 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_LIB_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 | |
| == 2018-10-27 19:12:27,894 environment.py:97 INFO Environment variable BLAS_LAPACK_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,894 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,894 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_MT_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a | |
| == 2018-10-27 19:12:27,894 environment.py:97 INFO Environment variable BLAS_LAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined) | |
| == 2018-10-27 19:12:27,894 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined) | |
| == 2018-10-27 19:12:27,894 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLAS_LAPACK_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a | |
| == 2018-10-27 19:12:27,894 environment.py:97 INFO Environment variable BLAS_LAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,894 environment.py:97 INFO Environment variable EBVARBLAS_LAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,894 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLAS_LIB_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 | |
| == 2018-10-27 19:12:27,894 environment.py:97 INFO Environment variable BLAS_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,895 environment.py:97 INFO Environment variable EBVARBLAS_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,895 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLAS_MT_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a | |
| == 2018-10-27 19:12:27,895 environment.py:97 INFO Environment variable BLAS_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined) | |
| == 2018-10-27 19:12:27,895 environment.py:97 INFO Environment variable EBVARBLAS_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined) | |
| == 2018-10-27 19:12:27,895 toolchain.py:915 DEBUG _setenv_variables: setting environment variable BLAS_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a | |
| == 2018-10-27 19:12:27,895 environment.py:97 INFO Environment variable BLAS_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,895 environment.py:97 INFO Environment variable EBVARBLAS_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,895 toolchain.py:915 DEBUG _setenv_variables: setting environment variable CC to icc | |
| == 2018-10-27 19:12:27,895 environment.py:97 INFO Environment variable CC set to icc (previously undefined) | |
| == 2018-10-27 19:12:27,895 environment.py:97 INFO Environment variable EBVARCC set to icc (previously undefined) | |
| == 2018-10-27 19:12:27,895 toolchain.py:915 DEBUG _setenv_variables: setting environment variable CFLAGS to -O2 -xHost -ftz -fp-speculation=safe -fp-model source | |
| == 2018-10-27 19:12:27,896 environment.py:97 INFO Environment variable CFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,896 environment.py:97 INFO Environment variable EBVARCFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,896 toolchain.py:915 DEBUG _setenv_variables: setting environment variable CPPFLAGS to -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include | |
| == 2018-10-27 19:12:27,896 environment.py:97 INFO Environment variable CPPFLAGS set to -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include (previously undefined) | |
| == 2018-10-27 19:12:27,896 environment.py:97 INFO Environment variable EBVARCPPFLAGS set to -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include (previously undefined) | |
| == 2018-10-27 19:12:27,896 toolchain.py:915 DEBUG _setenv_variables: setting environment variable CXX to icpc | |
| == 2018-10-27 19:12:27,896 environment.py:97 INFO Environment variable CXX set to icpc (previously undefined) | |
| == 2018-10-27 19:12:27,896 environment.py:97 INFO Environment variable EBVARCXX set to icpc (previously undefined) | |
| == 2018-10-27 19:12:27,896 toolchain.py:915 DEBUG _setenv_variables: setting environment variable CXXFLAGS to -O2 -xHost -ftz -fp-speculation=safe -fp-model source | |
| == 2018-10-27 19:12:27,896 environment.py:97 INFO Environment variable CXXFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,896 environment.py:97 INFO Environment variable EBVARCXXFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,896 toolchain.py:915 DEBUG _setenv_variables: setting environment variable F77 to ifort | |
| == 2018-10-27 19:12:27,897 environment.py:97 INFO Environment variable F77 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,897 environment.py:97 INFO Environment variable EBVARF77 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,897 toolchain.py:915 DEBUG _setenv_variables: setting environment variable F90 to ifort | |
| == 2018-10-27 19:12:27,897 environment.py:97 INFO Environment variable F90 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,897 environment.py:97 INFO Environment variable EBVARF90 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,897 toolchain.py:915 DEBUG _setenv_variables: setting environment variable F90FLAGS to -O2 -xHost -ftz -fp-speculation=safe -fp-model source | |
| == 2018-10-27 19:12:27,897 environment.py:97 INFO Environment variable F90FLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,897 environment.py:97 INFO Environment variable EBVARF90FLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,897 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FC to ifort | |
| == 2018-10-27 19:12:27,897 environment.py:97 INFO Environment variable FC set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,897 environment.py:97 INFO Environment variable EBVARFC set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,898 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FCFLAGS to -O2 -xHost -ftz -fp-speculation=safe -fp-model source | |
| == 2018-10-27 19:12:27,898 environment.py:97 INFO Environment variable FCFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,898 environment.py:97 INFO Environment variable EBVARFCFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,898 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FFLAGS to -O2 -xHost -ftz -fp-speculation=safe -fp-model source | |
| == 2018-10-27 19:12:27,898 environment.py:97 INFO Environment variable FFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,898 environment.py:97 INFO Environment variable EBVARFFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,898 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FFTW_INC_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include/fftw | |
| == 2018-10-27 19:12:27,898 environment.py:97 INFO Environment variable FFTW_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include/fftw (previously undefined) | |
| == 2018-10-27 19:12:27,898 environment.py:97 INFO Environment variable EBVARFFTW_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include/fftw (previously undefined) | |
| == 2018-10-27 19:12:27,898 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FFTW_LIB_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 | |
| == 2018-10-27 19:12:27,898 environment.py:97 INFO Environment variable FFTW_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,899 environment.py:97 INFO Environment variable EBVARFFTW_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,899 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FFTW_STATIC_LIBS to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a | |
| == 2018-10-27 19:12:27,899 environment.py:97 INFO Environment variable FFTW_STATIC_LIBS set to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,899 environment.py:97 INFO Environment variable EBVARFFTW_STATIC_LIBS set to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,899 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FFTW_STATIC_LIBS_MT to -fftw3xc_intel -mkl_intel_lp64 -mkl_sequential -mkl_core | |
| == 2018-10-27 19:12:27,899 environment.py:97 INFO Environment variable FFTW_STATIC_LIBS_MT set to -fftw3xc_intel -mkl_intel_lp64 -mkl_sequential -mkl_core (previously undefined) | |
| == 2018-10-27 19:12:27,899 environment.py:97 INFO Environment variable EBVARFFTW_STATIC_LIBS_MT set to -fftw3xc_intel -mkl_intel_lp64 -mkl_sequential -mkl_core (previously undefined) | |
| == 2018-10-27 19:12:27,899 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FFT_INC_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include/fftw | |
| == 2018-10-27 19:12:27,899 environment.py:97 INFO Environment variable FFT_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include/fftw (previously undefined) | |
| == 2018-10-27 19:12:27,899 environment.py:97 INFO Environment variable EBVARFFT_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include/fftw (previously undefined) | |
| == 2018-10-27 19:12:27,899 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FFT_LIB_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 | |
| == 2018-10-27 19:12:27,900 environment.py:97 INFO Environment variable FFT_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,900 environment.py:97 INFO Environment variable EBVARFFT_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,900 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FFT_STATIC_LIBS to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a | |
| == 2018-10-27 19:12:27,900 environment.py:97 INFO Environment variable FFT_STATIC_LIBS set to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,900 environment.py:97 INFO Environment variable EBVARFFT_STATIC_LIBS set to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,900 toolchain.py:915 DEBUG _setenv_variables: setting environment variable FFT_STATIC_LIBS_MT to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a | |
| == 2018-10-27 19:12:27,900 environment.py:97 INFO Environment variable FFT_STATIC_LIBS_MT set to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,900 environment.py:97 INFO Environment variable EBVARFFT_STATIC_LIBS_MT set to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,900 toolchain.py:915 DEBUG _setenv_variables: setting environment variable I_MPI_CC to icc | |
| == 2018-10-27 19:12:27,900 environment.py:97 INFO Environment variable I_MPI_CC set to icc (previously undefined) | |
| == 2018-10-27 19:12:27,900 environment.py:97 INFO Environment variable EBVARI_MPI_CC set to icc (previously undefined) | |
| == 2018-10-27 19:12:27,900 toolchain.py:915 DEBUG _setenv_variables: setting environment variable I_MPI_CXX to icpc | |
| == 2018-10-27 19:12:27,901 environment.py:97 INFO Environment variable I_MPI_CXX set to icpc (previously undefined) | |
| == 2018-10-27 19:12:27,901 environment.py:97 INFO Environment variable EBVARI_MPI_CXX set to icpc (previously undefined) | |
| == 2018-10-27 19:12:27,901 toolchain.py:915 DEBUG _setenv_variables: setting environment variable I_MPI_F77 to ifort | |
| == 2018-10-27 19:12:27,901 environment.py:97 INFO Environment variable I_MPI_F77 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,901 environment.py:97 INFO Environment variable EBVARI_MPI_F77 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,901 toolchain.py:915 DEBUG _setenv_variables: setting environment variable I_MPI_F90 to ifort | |
| == 2018-10-27 19:12:27,901 environment.py:97 INFO Environment variable I_MPI_F90 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,901 environment.py:97 INFO Environment variable EBVARI_MPI_F90 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,901 toolchain.py:915 DEBUG _setenv_variables: setting environment variable I_MPI_FC to ifort | |
| == 2018-10-27 19:12:27,901 environment.py:97 INFO Environment variable I_MPI_FC set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,901 environment.py:97 INFO Environment variable EBVARI_MPI_FC set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,902 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LAPACK_INC_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include | |
| == 2018-10-27 19:12:27,902 environment.py:97 INFO Environment variable LAPACK_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include (previously undefined) | |
| == 2018-10-27 19:12:27,902 environment.py:97 INFO Environment variable EBVARLAPACK_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include (previously undefined) | |
| == 2018-10-27 19:12:27,902 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LAPACK_LIB_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 | |
| == 2018-10-27 19:12:27,902 environment.py:97 INFO Environment variable LAPACK_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,902 environment.py:97 INFO Environment variable EBVARLAPACK_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,902 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LAPACK_MT_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a | |
| == 2018-10-27 19:12:27,902 environment.py:97 INFO Environment variable LAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined) | |
| == 2018-10-27 19:12:27,902 environment.py:97 INFO Environment variable EBVARLAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined) | |
| == 2018-10-27 19:12:27,902 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LAPACK_STATIC_LIBS to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a | |
| == 2018-10-27 19:12:27,902 environment.py:97 INFO Environment variable LAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,903 environment.py:97 INFO Environment variable EBVARLAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,903 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LDFLAGS to -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/icc/2018.3.222-GCC-7.3.0-2.30/lib/intel64 -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/lib | |
| == 2018-10-27 19:12:27,903 environment.py:97 INFO Environment variable LDFLAGS set to -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/icc/2018.3.222-GCC-7.3.0-2.30/lib/intel64 -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/lib (previously undefined) | |
| == 2018-10-27 19:12:27,903 environment.py:97 INFO Environment variable EBVARLDFLAGS set to -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/icc/2018.3.222-GCC-7.3.0-2.30/lib/intel64 -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/lib (previously undefined) | |
| == 2018-10-27 19:12:27,903 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBBLACS to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic | |
| == 2018-10-27 19:12:27,903 environment.py:97 INFO Environment variable LIBBLACS set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,903 environment.py:97 INFO Environment variable EBVARLIBBLACS set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,903 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBBLACS_MT to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic | |
| == 2018-10-27 19:12:27,903 environment.py:97 INFO Environment variable LIBBLACS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,903 environment.py:97 INFO Environment variable EBVARLIBBLACS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,903 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBBLAS to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic | |
| == 2018-10-27 19:12:27,904 environment.py:97 INFO Environment variable LIBBLAS set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,904 environment.py:97 INFO Environment variable EBVARLIBBLAS set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,904 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBBLAS_MT to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread | |
| == 2018-10-27 19:12:27,904 environment.py:97 INFO Environment variable LIBBLAS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,904 environment.py:97 INFO Environment variable EBVARLIBBLAS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,904 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBFFT to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic | |
| == 2018-10-27 19:12:27,904 environment.py:97 INFO Environment variable LIBFFT set to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,904 environment.py:97 INFO Environment variable EBVARLIBFFT set to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,904 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBFFT_MT to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic | |
| == 2018-10-27 19:12:27,904 environment.py:97 INFO Environment variable LIBFFT_MT set to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,905 environment.py:97 INFO Environment variable EBVARLIBFFT_MT set to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,905 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBLAPACK to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic | |
| == 2018-10-27 19:12:27,905 environment.py:97 INFO Environment variable LIBLAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,905 environment.py:97 INFO Environment variable EBVARLIBLAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,905 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBLAPACK_MT to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread | |
| == 2018-10-27 19:12:27,905 environment.py:97 INFO Environment variable LIBLAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,905 environment.py:97 INFO Environment variable EBVARLIBLAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,905 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBLAPACK_MT_ONLY to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread | |
| == 2018-10-27 19:12:27,905 environment.py:97 INFO Environment variable LIBLAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,905 environment.py:97 INFO Environment variable EBVARLIBLAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,906 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBLAPACK_ONLY to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic | |
| == 2018-10-27 19:12:27,906 environment.py:97 INFO Environment variable LIBLAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,906 environment.py:97 INFO Environment variable EBVARLIBLAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,906 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBS to -liomp5 -lpthread | |
| == 2018-10-27 19:12:27,906 environment.py:97 INFO Environment variable LIBS set to -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,906 environment.py:97 INFO Environment variable EBVARLIBS set to -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,906 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic | |
| == 2018-10-27 19:12:27,906 environment.py:97 INFO Environment variable LIBSCALAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,906 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,907 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_MT to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread | |
| == 2018-10-27 19:12:27,907 environment.py:97 INFO Environment variable LIBSCALAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,907 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,907 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_MT_ONLY to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread | |
| == 2018-10-27 19:12:27,907 environment.py:97 INFO Environment variable LIBSCALAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,907 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined) | |
| == 2018-10-27 19:12:27,907 toolchain.py:915 DEBUG _setenv_variables: setting environment variable LIBSCALAPACK_ONLY to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic | |
| == 2018-10-27 19:12:27,907 environment.py:97 INFO Environment variable LIBSCALAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,907 environment.py:97 INFO Environment variable EBVARLIBSCALAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined) | |
| == 2018-10-27 19:12:27,907 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPICC to mpiicc | |
| == 2018-10-27 19:12:27,907 environment.py:97 INFO Environment variable MPICC set to mpiicc (previously undefined) | |
| == 2018-10-27 19:12:27,908 environment.py:97 INFO Environment variable EBVARMPICC set to mpiicc (previously undefined) | |
| == 2018-10-27 19:12:27,908 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPICH_CC to icc | |
| == 2018-10-27 19:12:27,908 environment.py:97 INFO Environment variable MPICH_CC set to icc (previously undefined) | |
| == 2018-10-27 19:12:27,908 environment.py:97 INFO Environment variable EBVARMPICH_CC set to icc (previously undefined) | |
| == 2018-10-27 19:12:27,908 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPICH_CXX to icpc | |
| == 2018-10-27 19:12:27,908 environment.py:97 INFO Environment variable MPICH_CXX set to icpc (previously undefined) | |
| == 2018-10-27 19:12:27,908 environment.py:97 INFO Environment variable EBVARMPICH_CXX set to icpc (previously undefined) | |
| == 2018-10-27 19:12:27,908 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPICH_F77 to ifort | |
| == 2018-10-27 19:12:27,908 environment.py:97 INFO Environment variable MPICH_F77 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,908 environment.py:97 INFO Environment variable EBVARMPICH_F77 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,908 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPICH_F90 to ifort | |
| == 2018-10-27 19:12:27,908 environment.py:97 INFO Environment variable MPICH_F90 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,909 environment.py:97 INFO Environment variable EBVARMPICH_F90 set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,909 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPICH_FC to ifort | |
| == 2018-10-27 19:12:27,909 environment.py:97 INFO Environment variable MPICH_FC set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,909 environment.py:97 INFO Environment variable EBVARMPICH_FC set to ifort (previously undefined) | |
| == 2018-10-27 19:12:27,909 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPICXX to mpiicpc | |
| == 2018-10-27 19:12:27,909 environment.py:97 INFO Environment variable MPICXX set to mpiicpc (previously undefined) | |
| == 2018-10-27 19:12:27,909 environment.py:97 INFO Environment variable EBVARMPICXX set to mpiicpc (previously undefined) | |
| == 2018-10-27 19:12:27,909 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPIF77 to mpiifort | |
| == 2018-10-27 19:12:27,909 environment.py:97 INFO Environment variable MPIF77 set to mpiifort (previously undefined) | |
| == 2018-10-27 19:12:27,909 environment.py:97 INFO Environment variable EBVARMPIF77 set to mpiifort (previously undefined) | |
| == 2018-10-27 19:12:27,909 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPIF90 to mpiifort | |
| == 2018-10-27 19:12:27,910 environment.py:97 INFO Environment variable MPIF90 set to mpiifort (previously undefined) | |
| == 2018-10-27 19:12:27,910 environment.py:97 INFO Environment variable EBVARMPIF90 set to mpiifort (previously undefined) | |
| == 2018-10-27 19:12:27,910 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPIFC to mpiifort | |
| == 2018-10-27 19:12:27,910 environment.py:97 INFO Environment variable MPIFC set to mpiifort (previously undefined) | |
| == 2018-10-27 19:12:27,910 environment.py:97 INFO Environment variable EBVARMPIFC set to mpiifort (previously undefined) | |
| == 2018-10-27 19:12:27,910 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPI_INC_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/include64 | |
| == 2018-10-27 19:12:27,910 environment.py:97 INFO Environment variable MPI_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/include64 (previously undefined) | |
| == 2018-10-27 19:12:27,910 environment.py:97 INFO Environment variable EBVARMPI_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/include64 (previously undefined) | |
| == 2018-10-27 19:12:27,910 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPI_LIB_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/lib64 | |
| == 2018-10-27 19:12:27,910 environment.py:97 INFO Environment variable MPI_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/lib64 (previously undefined) | |
| == 2018-10-27 19:12:27,910 environment.py:97 INFO Environment variable EBVARMPI_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/lib64 (previously undefined) | |
| == 2018-10-27 19:12:27,911 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPI_LIB_SHARED to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/lib64/libmpi.so | |
| == 2018-10-27 19:12:27,911 environment.py:97 INFO Environment variable MPI_LIB_SHARED set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/lib64/libmpi.so (previously undefined) | |
| == 2018-10-27 19:12:27,911 environment.py:97 INFO Environment variable EBVARMPI_LIB_SHARED set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/lib64/libmpi.so (previously undefined) | |
| == 2018-10-27 19:12:27,911 toolchain.py:915 DEBUG _setenv_variables: setting environment variable MPI_LIB_STATIC to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/lib64/libmpi.a | |
| == 2018-10-27 19:12:27,911 environment.py:97 INFO Environment variable MPI_LIB_STATIC set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/lib64/libmpi.a (previously undefined) | |
| == 2018-10-27 19:12:27,911 environment.py:97 INFO Environment variable EBVARMPI_LIB_STATIC set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/impi/2018.3.222-iccifort-2018.3.222-GCC-7.3.0-2.30/lib64/libmpi.a (previously undefined) | |
| == 2018-10-27 19:12:27,911 toolchain.py:915 DEBUG _setenv_variables: setting environment variable OPTFLAGS to -O2 -xHost | |
| == 2018-10-27 19:12:27,911 environment.py:97 INFO Environment variable OPTFLAGS set to -O2 -xHost (previously undefined) | |
| == 2018-10-27 19:12:27,911 environment.py:97 INFO Environment variable EBVAROPTFLAGS set to -O2 -xHost (previously undefined) | |
| == 2018-10-27 19:12:27,911 toolchain.py:915 DEBUG _setenv_variables: setting environment variable PRECFLAGS to -ftz -fp-speculation=safe -fp-model source | |
| == 2018-10-27 19:12:27,911 environment.py:97 INFO Environment variable PRECFLAGS set to -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,912 environment.py:97 INFO Environment variable EBVARPRECFLAGS set to -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2018-10-27 19:12:27,912 toolchain.py:915 DEBUG _setenv_variables: setting environment variable SCALAPACK_INC_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include | |
| == 2018-10-27 19:12:27,912 environment.py:97 INFO Environment variable SCALAPACK_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include (previously undefined) | |
| == 2018-10-27 19:12:27,912 environment.py:97 INFO Environment variable EBVARSCALAPACK_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include (previously undefined) | |
| == 2018-10-27 19:12:27,912 toolchain.py:915 DEBUG _setenv_variables: setting environment variable SCALAPACK_LIB_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 | |
| == 2018-10-27 19:12:27,912 environment.py:97 INFO Environment variable SCALAPACK_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,912 environment.py:97 INFO Environment variable EBVARSCALAPACK_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/lib/intel64 (previously undefined) | |
| == 2018-10-27 19:12:27,912 toolchain.py:915 DEBUG _setenv_variables: setting environment variable SCALAPACK_MT_STATIC_LIBS to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a | |
| == 2018-10-27 19:12:27,912 environment.py:97 INFO Environment variable SCALAPACK_MT_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined) | |
| == 2018-10-27 19:12:27,912 environment.py:97 INFO Environment variable EBVARSCALAPACK_MT_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined) | |
| == 2018-10-27 19:12:27,913 toolchain.py:915 DEBUG _setenv_variables: setting environment variable SCALAPACK_STATIC_LIBS to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a | |
| == 2018-10-27 19:12:27,913 environment.py:97 INFO Environment variable SCALAPACK_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,913 environment.py:97 INFO Environment variable EBVARSCALAPACK_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2018-10-27 19:12:27,913 easyblock.py:1458 INFO Using /tmp/vsc40023/easybuild_build/Normaliz/3.6.3/intel-2018b/normaliz-3.6.3/ as start dir | |
| == 2018-10-27 19:12:27,913 easyblock.py:1461 DEBUG Changed to real build directory /tmp/vsc40023/easybuild_build/Normaliz/3.6.3/intel-2018b/normaliz-3.6.3/ (start_dir) | |
| == 2018-10-27 19:12:27,913 easyblock.py:2604 DEBUG Not skipping configure step (skippable: True, skip: None, skipsteps: [], module_only: False, force: True | |
| == 2018-10-27 19:12:27,913 build_log.py:236 INFO configuring... | |
| == 2018-10-27 19:12:27,913 easyblock.py:2612 INFO Starting configure step | |
| == 2018-10-27 19:12:27,913 templates.py:154 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2b3a3665a650> | |
| == 2018-10-27 19:12:27,914 templates.py:178 DEBUG version found in easyconfig is 3.6.3 | |
| == 2018-10-27 19:12:27,914 templates.py:222 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2018-10-27 19:12:27,914 templates.py:222 DEBUG name: github_account, config: %(namelower)s | |
| == 2018-10-27 19:12:27,914 templates.py:222 DEBUG name: name, config: Normaliz | |
| == 2018-10-27 19:12:27,914 templates.py:222 DEBUG name: version, config: 3.6.3 | |
| == 2018-10-27 19:12:27,914 templates.py:222 DEBUG name: versionsuffix, config: | |
| == 2018-10-27 19:12:27,914 templates.py:222 DEBUG name: versionprefix, config: | |
| == 2018-10-27 19:12:27,914 templates.py:154 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2b3a3665a650> | |
| == 2018-10-27 19:12:27,914 templates.py:178 DEBUG version found in easyconfig is 3.6.3 | |
| == 2018-10-27 19:12:27,914 templates.py:222 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2018-10-27 19:12:27,915 templates.py:222 DEBUG name: github_account, config: %(namelower)s | |
| == 2018-10-27 19:12:27,915 templates.py:222 DEBUG name: name, config: Normaliz | |
| == 2018-10-27 19:12:27,915 templates.py:222 DEBUG name: version, config: 3.6.3 | |
| == 2018-10-27 19:12:27,915 templates.py:222 DEBUG name: versionsuffix, config: | |
| == 2018-10-27 19:12:27,915 templates.py:222 DEBUG name: versionprefix, config: | |
| == 2018-10-27 19:12:27,915 easyblock.py:2618 INFO Running method configure_step part of step configure | |
| == 2018-10-27 19:12:27,929 filetools.py:714 DEBUG Using blocksize 16777216 for calculating the checksum | |
| == 2018-10-27 19:12:27,930 configuremake.py:157 INFO config.guess version: 2018-08-29 (last updated: 2018-10-27T17:44:29.145194, SHA256 checksum: c02eb9cc55c86cfd1e9a794e548d25db5c9539e7b2154beb649bc6e2cbffc74c) | |
| == 2018-10-27 19:12:27,930 run.py:135 DEBUG run_cmd: Output of "/user/data/gent/vsc400/vsc40023/EasyBuild/sources/generic/eb_v3.7.2.dev0/ConfigureMake/config.guess" will be logged to /local/798783X7040X.master21.swalot.gent.vsc/eb-LF1Nnw/easybuild-run_cmd-dEDa2L.log | |
| == 2018-10-27 19:12:27,930 run.py:173 DEBUG run_cmd: running cmd /user/data/gent/vsc400/vsc40023/EasyBuild/sources/generic/eb_v3.7.2.dev0/ConfigureMake/config.guess (in /tmp/vsc40023/easybuild_build/Normaliz/3.6.3/intel-2018b/normaliz-3.6.3) | |
| == 2018-10-27 19:12:27,930 run.py:192 INFO running cmd: /user/data/gent/vsc400/vsc40023/EasyBuild/sources/generic/eb_v3.7.2.dev0/ConfigureMake/config.guess | |
| == 2018-10-27 19:12:28,058 run.py:506 INFO cmd "/user/data/gent/vsc400/vsc40023/EasyBuild/sources/generic/eb_v3.7.2.dev0/ConfigureMake/config.guess" exited with exit code 0 and output: | |
| x86_64-pc-linux-gnu | |
| == 2018-10-27 19:12:28,058 run.py:542 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2018-10-27 19:12:28,058 configuremake.py:229 INFO /user/data/gent/vsc400/vsc40023/EasyBuild/sources/generic/eb_v3.7.2.dev0/ConfigureMake/config.guess returned a system type 'x86_64-pc-linux-gnu' | |
| == 2018-10-27 19:12:28,058 configuremake.py:233 INFO Providing 'x86_64-pc-linux-gnu' as value to --build option of configure script | |
| == 2018-10-27 19:12:28,058 configuremake.py:237 INFO Providing 'x86_64-pc-linux-gnu' as value to --host option of configure script | |
| == 2018-10-27 19:12:28,059 run.py:135 DEBUG run_cmd: Output of " ./configure --prefix=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/Normaliz/3.6.3-intel-2018b --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu " will be logged to /local/798783X7040X.master21.swalot.gent.vsc/eb-LF1Nnw/easybuild-run_cmd-bU6aPD.log | |
| == 2018-10-27 19:12:28,059 run.py:173 DEBUG run_cmd: running cmd ./configure --prefix=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/Normaliz/3.6.3-intel-2018b --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu (in /tmp/vsc40023/easybuild_build/Normaliz/3.6.3/intel-2018b/normaliz-3.6.3) | |
| == 2018-10-27 19:12:28,059 run.py:192 INFO running cmd: ./configure --prefix=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/Normaliz/3.6.3-intel-2018b --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu | |
| == 2018-10-27 19:12:40,957 run.py:506 INFO cmd " ./configure --prefix=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/Normaliz/3.6.3-intel-2018b --build=x86_64-pc-linux-gnu --host=x86_64-pc-linux-gnu " exited with exit code 0 and output: | |
| checking for a BSD-compatible install... /bin/install -c | |
| checking whether build environment is sane... yes | |
| checking for a thread-safe mkdir -p... /bin/mkdir -p | |
| checking for gawk... gawk | |
| checking whether make sets $(MAKE)... yes | |
| checking whether make supports nested variables... yes | |
| checking whether the C++ compiler works... yes | |
| checking for C++ compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether icpc accepts -g... yes | |
| checking for style of include used by make... GNU | |
| checking dependency style of icpc... gcc3 | |
| checking whether icpc supports C++11 features by default... yes | |
| checking build system type... x86_64-pc-linux-gnu | |
| checking host system type... x86_64-pc-linux-gnu | |
| checking how to print strings... printf | |
| checking for x86_64-pc-linux-gnu-gcc... icc | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether icc accepts -g... yes | |
| checking for icc option to accept ISO C89... none needed | |
| checking whether icc understands -c and -o together... yes | |
| checking dependency style of icc... gcc3 | |
| checking for a sed that does not truncate output... /bin/sed | |
| checking for grep that handles long lines and -e... /bin/grep | |
| checking for egrep... /bin/grep -E | |
| checking for fgrep... /bin/grep -F | |
| checking for ld used by icc... /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/ld | |
| checking if the linker (/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/ld) is GNU ld... yes | |
| checking for BSD- or MS-compatible name lister (nm)... /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/nm -B | |
| checking the name lister (/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/nm -B) interface... BSD nm | |
| checking whether ln -s works... yes | |
| checking the maximum length of command line arguments... 3458764513820540925 | |
| checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop | |
| checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop | |
| checking for /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/ld option to reload object files... -r | |
| checking for x86_64-pc-linux-gnu-objdump... no | |
| checking for objdump... objdump | |
| checking how to recognize dependent libraries... pass_all | |
| checking for x86_64-pc-linux-gnu-dlltool... no | |
| checking for dlltool... no | |
| checking how to associate runtime and link libraries... printf %s\n | |
| checking for x86_64-pc-linux-gnu-ar... no | |
| checking for ar... ar | |
| checking for archiver @FILE support... @ | |
| checking for x86_64-pc-linux-gnu-strip... no | |
| checking for strip... strip | |
| checking for x86_64-pc-linux-gnu-ranlib... no | |
| checking for ranlib... ranlib | |
| checking command to parse /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/nm -B output from icc object... ok | |
| checking for sysroot... no | |
| checking for a working dd... /bin/dd | |
| checking how to truncate binary pipes... /bin/dd bs=4096 count=1 | |
| checking for x86_64-pc-linux-gnu-mt... no | |
| checking for mt... no | |
| checking if : is a manifest tool... no | |
| checking how to run the C preprocessor... icc -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking for dlfcn.h... yes | |
| checking for objdir... .libs | |
| checking if icc supports -fno-rtti -fno-exceptions... yes | |
| checking for icc option to produce PIC... -fPIC -DPIC | |
| checking if icc PIC flag -fPIC -DPIC works... yes | |
| checking if icc static flag -static works... yes | |
| checking if icc supports -c -o file.o... yes | |
| checking if icc supports -c -o file.o... (cached) yes | |
| checking whether the icc linker (/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking whether -lc should be explicitly linked in... no | |
| checking dynamic linker characteristics... GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether stripping libraries is possible... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... yes | |
| checking how to run the C++ preprocessor... icpc -E | |
| checking for ld used by icpc... /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/ld -m elf_x86_64 | |
| checking if the linker (/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking whether the icpc linker (/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking for icpc option to produce PIC... -fPIC -DPIC | |
| checking if icpc PIC flag -fPIC -DPIC works... yes | |
| checking if icpc static flag -static works... yes | |
| checking if icpc supports -c -o file.o... yes | |
| checking if icpc supports -c -o file.o... (cached) yes | |
| checking whether the icpc linker (/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/binutils/2.30-GCCcore-7.3.0/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether GMP C++ library is available... yes | |
| checking for OpenMP flag of C++ compiler... -fopenmp | |
| checking whether SCIP headers and library are available... no | |
| configure: Cone decomposition with SCIP integer programming solver will not be available because the SCIP library was not found | |
| checking whether CoCoALib headers and library are available... no | |
| configure: nmzIntegrate will not be built because CoCoALib was not found | |
| checking for dummy_fn_to_prevent_ISOC_warning in -lflint... no | |
| configure: flint will not be used because flint could not be found | |
| checking whether e-antic headers and library are available... no | |
| checking that generated files are newer than configure... done | |
| configure: creating ./config.status | |
| config.status: creating Makefile | |
| config.status: creating source/Makefile | |
| config.status: creating Qsource/Makefile | |
| config.status: creating source/libnormaliz/version.h | |
| config.status: creating Qsource/libQnormaliz/Qversion.h | |
| config.status: creating example/Makefile | |
| config.status: creating Qexample/Makefile | |
| config.status: creating test/Makefile | |
| config.status: creating Qtest/Makefile | |
| config.status: executing depfiles commands | |
| config.status: executing libtool commands | |
| == 2018-10-27 19:12:40,957 run.py:542 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2018-10-27 19:12:40,958 easyblock.py:2604 DEBUG Not skipping build step (skippable: True, skip: None, skipsteps: [], module_only: False, force: True | |
| == 2018-10-27 19:12:40,958 build_log.py:236 INFO building... | |
| == 2018-10-27 19:12:40,958 easyblock.py:2612 INFO Starting build step | |
| == 2018-10-27 19:12:40,958 templates.py:154 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2b3a3665a650> | |
| == 2018-10-27 19:12:40,958 templates.py:178 DEBUG version found in easyconfig is 3.6.3 | |
| == 2018-10-27 19:12:40,958 templates.py:222 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2018-10-27 19:12:40,959 templates.py:222 DEBUG name: github_account, config: %(namelower)s | |
| == 2018-10-27 19:12:40,959 templates.py:222 DEBUG name: name, config: Normaliz | |
| == 2018-10-27 19:12:40,959 templates.py:222 DEBUG name: version, config: 3.6.3 | |
| == 2018-10-27 19:12:40,959 templates.py:222 DEBUG name: versionsuffix, config: | |
| == 2018-10-27 19:12:40,959 templates.py:222 DEBUG name: versionprefix, config: | |
| == 2018-10-27 19:12:40,959 templates.py:154 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x2b3a3665a650> | |
| == 2018-10-27 19:12:40,959 templates.py:178 DEBUG version found in easyconfig is 3.6.3 | |
| == 2018-10-27 19:12:40,959 templates.py:222 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2018-10-27 19:12:40,959 templates.py:222 DEBUG name: github_account, config: %(namelower)s | |
| == 2018-10-27 19:12:40,959 templates.py:222 DEBUG name: name, config: Normaliz | |
| == 2018-10-27 19:12:40,960 templates.py:222 DEBUG name: version, config: 3.6.3 | |
| == 2018-10-27 19:12:40,960 templates.py:222 DEBUG name: versionsuffix, config: | |
| == 2018-10-27 19:12:40,960 templates.py:222 DEBUG name: versionprefix, config: | |
| == 2018-10-27 19:12:40,960 easyblock.py:2618 INFO Running method build_step part of step build | |
| == 2018-10-27 19:12:40,960 run.py:135 DEBUG run_cmd: Output of " make -j 5 " will be logged to /local/798783X7040X.master21.swalot.gent.vsc/eb-LF1Nnw/easybuild-run_cmd-SRbwtu.log | |
| == 2018-10-27 19:12:40,960 run.py:173 DEBUG run_cmd: running cmd make -j 5 (in /tmp/vsc40023/easybuild_build/Normaliz/3.6.3/intel-2018b/normaliz-3.6.3) | |
| == 2018-10-27 19:12:40,960 run.py:192 INFO running cmd: make -j 5 | |
| == 2018-10-27 19:12:42,874 build_log.py:158 ERROR EasyBuild crashed with an error (at ?:124 in __init__): cmd " make -j 5 " exited with exit code 2 and output: | |
| Making all in source | |
| make[1]: Entering directory `/tmp/vsc40023/easybuild_build/Normaliz/3.6.3/intel-2018b/normaliz-3.6.3/source' | |
| depbase=`echo normaliz.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ | |
| icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\"normaliz\" -DPACKAGE_VERSION=\"3.6.3\" -DPACKAGE_STRING=\"Normaliz\ 3.6.3\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"normaliz\" -DVERSION=\"3.6.3\" -DHAVE_CXX11=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -I../source -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include -fopenmp -O2 -xHost -ftz -fp-speculation=safe -fp-model source -MT normaliz.o -MD -MP -MF $depbase.Tpo -c -o normaliz.o normaliz.cpp &&\ | |
| mv -f $depbase.Tpo $depbase.Po | |
| depbase=`echo libnormaliz/enumeration.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ | |
| /bin/sh ../libtool --tag=CXX --mode=compile icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\"normaliz\" -DPACKAGE_VERSION=\"3.6.3\" -DPACKAGE_STRING=\"Normaliz\ 3.6.3\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"normaliz\" -DVERSION=\"3.6.3\" -DHAVE_CXX11=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -I../source -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include -fopenmp -O2 -xHost -ftz -fp-speculation=safe -fp-model source -MT libnormaliz/enumeration.lo -MD -MP -MF $depbase.Tpo -c -o libnormaliz/enumeration.lo libnormaliz/enumeration.cpp &&\ | |
| mv -f $depbase.Tpo $depbase.Plo | |
| depbase=`echo libnormaliz/other_algorithms.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ | |
| /bin/sh ../libtool --tag=CXX --mode=compile icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\"normaliz\" -DPACKAGE_VERSION=\"3.6.3\" -DPACKAGE_STRING=\"Normaliz\ 3.6.3\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"normaliz\" -DVERSION=\"3.6.3\" -DHAVE_CXX11=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -I../source -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include -fopenmp -O2 -xHost -ftz -fp-speculation=safe -fp-model source -MT libnormaliz/other_algorithms.lo -MD -MP -MF $depbase.Tpo -c -o libnormaliz/other_algorithms.lo libnormaliz/other_algorithms.cpp &&\ | |
| mv -f $depbase.Tpo $depbase.Plo | |
| depbase=`echo libnormaliz/linear_algebra.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ | |
| /bin/sh ../libtool --tag=CXX --mode=compile icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\"normaliz\" -DPACKAGE_VERSION=\"3.6.3\" -DPACKAGE_STRING=\"Normaliz\ 3.6.3\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"normaliz\" -DVERSION=\"3.6.3\" -DHAVE_CXX11=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -I../source -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include -fopenmp -O2 -xHost -ftz -fp-speculation=safe -fp-model source -MT libnormaliz/linear_algebra.lo -MD -MP -MF $depbase.Tpo -c -o libnormaliz/linear_algebra.lo libnormaliz/linear_algebra.cpp &&\ | |
| mv -f $depbase.Tpo $depbase.Plo | |
| depbase=`echo libnormaliz/offload_handler.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ | |
| /bin/sh ../libtool --tag=CXX --mode=compile icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\"normaliz\" -DPACKAGE_VERSION=\"3.6.3\" -DPACKAGE_STRING=\"Normaliz\ 3.6.3\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"normaliz\" -DVERSION=\"3.6.3\" -DHAVE_CXX11=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -I../source -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include -fopenmp -O2 -xHost -ftz -fp-speculation=safe -fp-model source -MT libnormaliz/offload_handler.lo -MD -MP -MF $depbase.Tpo -c -o libnormaliz/offload_handler.lo libnormaliz/offload_handler.cpp &&\ | |
| mv -f $depbase.Tpo $depbase.Plo | |
| In file included from normaliz.cpp(40): | |
| libnormaliz/cone.h(31): catastrophic error: cannot open source file "boost/dynamic_bitset.hpp" | |
| #include <boost/dynamic_bitset.hpp> | |
| ^ | |
| compilation aborted for normaliz.cpp (code 4) | |
| make[1]: *** [normaliz.o] Error 4 | |
| make[1]: *** Waiting for unfinished jobs.... | |
| libtool: compile: icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\"normaliz\" -DPACKAGE_VERSION=\"3.6.3\" "-DPACKAGE_STRING=\"Normaliz 3.6.3\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"normaliz\" -DVERSION=\"3.6.3\" -DHAVE_CXX11=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -I../source -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include -fopenmp -O2 -xHost -ftz -fp-speculation=safe -fp-model source -MT libnormaliz/other_algorithms.lo -MD -MP -MF libnormaliz/.deps/other_algorithms.Tpo -c libnormaliz/other_algorithms.cpp -fPIC -DPIC -o libnormaliz/.libs/other_algorithms.o | |
| libtool: compile: icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\"normaliz\" -DPACKAGE_VERSION=\"3.6.3\" "-DPACKAGE_STRING=\"Normaliz 3.6.3\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"normaliz\" -DVERSION=\"3.6.3\" -DHAVE_CXX11=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -I../source -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include -fopenmp -O2 -xHost -ftz -fp-speculation=safe -fp-model source -MT libnormaliz/offload_handler.lo -MD -MP -MF libnormaliz/.deps/offload_handler.Tpo -c libnormaliz/offload_handler.cpp -fPIC -DPIC -o libnormaliz/.libs/offload_handler.o | |
| libtool: compile: icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\"normaliz\" -DPACKAGE_VERSION=\"3.6.3\" "-DPACKAGE_STRING=\"Normaliz 3.6.3\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"normaliz\" -DVERSION=\"3.6.3\" -DHAVE_CXX11=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -I../source -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include -fopenmp -O2 -xHost -ftz -fp-speculation=safe -fp-model source -MT libnormaliz/enumeration.lo -MD -MP -MF libnormaliz/.deps/enumeration.Tpo -c libnormaliz/enumeration.cpp -fPIC -DPIC -o libnormaliz/.libs/enumeration.o | |
| libtool: compile: icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\"normaliz\" -DPACKAGE_VERSION=\"3.6.3\" "-DPACKAGE_STRING=\"Normaliz 3.6.3\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"normaliz\" -DVERSION=\"3.6.3\" -DHAVE_CXX11=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -I../source -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include -fopenmp -O2 -xHost -ftz -fp-speculation=safe -fp-model source -MT libnormaliz/linear_algebra.lo -MD -MP -MF libnormaliz/.deps/linear_algebra.Tpo -c libnormaliz/linear_algebra.cpp -fPIC -DPIC -o libnormaliz/.libs/linear_algebra.o | |
| libtool: compile: icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\"normaliz\" -DPACKAGE_VERSION=\"3.6.3\" "-DPACKAGE_STRING=\"Normaliz 3.6.3\"" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -DPACKAGE=\"normaliz\" -DVERSION=\"3.6.3\" -DHAVE_CXX11=1 -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DLT_OBJDIR=\".libs/\" -I. -I../source -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/imkl/2018.3.222-iimpi-2018b/mkl/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/haswell-ib/software/GMP/6.1.2-GCCcore-7.3.0/include -fopenmp -O2 -xHost -ftz -fp-speculation=safe -fp-model source -MT libnormaliz/offload_handler.lo -MD -MP -MF libnormaliz/.deps/offload_handler.Tpo -c libnormaliz/offload_handler.cpp -o libnormaliz/offload_handler.o >/dev/null 2>&1 | |
| In file included from ./libnormaliz/project_and_lift.cpp(24), | |
| from libnormaliz/other_algorithms.cpp(28): | |
| ./libnormaliz/project_and_lift.h(29): catastrophic error: cannot open source file "boost/dynamic_bitset.hpp" | |
| #include <boost/dynamic_bitset.hpp> | |
| ^ | |
| compilation aborted for libnormaliz/other_algorithms.cpp (code 4) | |
| make[1]: *** [libnormaliz/other_algorithms.lo] Error 1 | |
| In file included from ./libnormaliz/reduction.h(33), | |
| from ./libnormaliz/integer.cpp(32), | |
| from libnormaliz/linear_algebra.cpp(28): | |
| ./libnormaliz/full_cone.h(31): catastrophic error: cannot open source file "boost/dynamic_bitset.hpp" | |
| #include <boost/dynamic_bitset.hpp> | |
| ^ | |
| compilation aborted for libnormaliz/linear_algebra.cpp (code 4) | |
| make[1]: *** [libnormaliz/linear_algebra.lo] Error 1 | |
| In file included from ./libnormaliz/HilbertSeries.cpp(41), | |
| from libnormaliz/enumeration.cpp(28): | |
| ./libnormaliz/matrix.h(41): catastrophic error: cannot open source file "boost/dynamic_bitset.hpp" | |
| #include <boost/dynamic_bitset.hpp> | |
| ^ | |
| compilation aborted for libnormaliz/enumeration.cpp (code 4) | |
| make[1]: *** [libnormaliz/enumeration.lo] Error 1 | |
| make[1]: Leaving directory `/tmp/vsc40023/easybuild_build/Normaliz/3.6.3/intel-2018b/normaliz-3.6.3/source' | |
| make: *** [all-recursive] Error 1 | |
| (at easybuild/tools/run.py:501 in parse_cmd_output) | |
| == 2018-10-27 19:12:42,874 easyblock.py:2860 WARNING build failed (first 300 chars): cmd " make -j 5 " exited with exit code 2 and output: | |
| Making all in source | |
| make[1]: Entering directory `/tmp/vsc40023/easybuild_build/Normaliz/3.6.3/intel-2018b/normaliz-3.6.3/source' | |
| depbase=`echo normaliz.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\ | |
| icpc -DPACKAGE_NAME=\"Normaliz\" -DPACKAGE_TARNAME=\" | |
| == 2018-10-27 19:12:42,875 easyblock.py:285 INFO Closing log for application name Normaliz version 3.6.3 |
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