cedrickchee

// Use Gists to store code you would like to remember later on
console.log(window); // log the "window" object to the console

cedrickchee

class AMSgrad(Optimizer):
    """AMSGrad optimizer.

    Default parameters follow those provided in the Adam paper.

    # Arguments
        lr: float >= 0. Learning rate.
        beta_1: float, 0 < beta < 1. Generally close to 1.
        beta_2: float, 0 < beta < 1. Generally close to 1.
        epsilon: float >= 0. Fuzz factor.

cedrickchee

cedrickchee

Originally forked from Philipp Bayer's gist. All credits goes to him.

This gist convert the original text to markdown for better readability.

Problems and Ideas:

1. Gene function prediction - given a predicted protein or gene sequence, what is the function?

The classic approach is to use something like BLAST to compare with known sequences, but this has many drawbacks. For starters, in plants the databases lean very heavily towards Arabidopsis thaliana, not more common plants such as maize or wheat.

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Project Title

One Paragraph of project description goes here

Getting Started

These instructions will get you a copy of the project up and running on your local machine for development and testing purposes. See deployment for notes on how to deploy the project on a live system.

Prerequisites

cedrickchee

This gist was being mentioned by Jeremy in fast.ai deep learning part 2 2018, lesson 9 video. In this lesson, we are learning multi-class object detection (computer vision) using the pascal-multi.ipynb notebook.

One of the fast.ai's students pointed out that by using Pandas, we can do things much simpler than using Python collections.defaultdict and shared this gist.

>The more you get to know Pandas, the more often you realize it is a good way to solve lots of different problems.

cedrickchee

Inspired by dannyfritz/commit-message-emoji

See also gitmoji.

Commit type	Emoji
Initial commit	🎉 :tada:
Version tag	🔖 :bookmark:
New feature	✨ :sparkles:
Bugfix	🐛 :bug:

cedrickchee

System Design Cheatsheet

Picking the right architecture = Picking the right battles + Managing trade-offs

Basic Steps

1. Clarify and agree on the scope of the system

• User cases (description of sequences of events that, taken together, lead to a system doing something useful)
  • Who is going to use it?
  • How are they going to use it?

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etcd Versus Other Key-value Stores

• What do Etcd, Consul, and Zookeeper do?
  • Service Registration:
    • Host, port number, and sometimes authentication credentials, protocols, versions numbers, and/or environment details.
  • Service Discovery:
    • Ability for client application to query the central registry to learn of service location.
  • Consistent and durable general-purpose K/V store across distributed system.
• Some solutions support this better than others.

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Latency numbers every programmer should know

L1 cache reference ......................... 0.5 ns
Branch mispredict ............................ 5 ns
L2 cache reference ........................... 7 ns
Mutex lock/unlock ........................... 25 ns
Main memory reference ...................... 100 ns             
Compress 1K bytes with Zippy ............. 3,000 ns  =   3 µs
Send 2K bytes over 1 Gbps network ....... 20,000 ns  =  20 µs
SSD random read ........................ 150,000 ns  = 150 µs

Read 1 MB sequentially from memory ..... 250,000 ns = 250 µs