| cd "~/Dropbox/Datasets/DHSbr/archives/" | |
| fsx *.ZIP *.zip | |
| foreach file in `r(files)' { | |
| capture unzipfile `file', replace | |
| fsx *.DTA *.dta | |
| local data `r(files)' | |
| use `data', clear | |
| describe, short | |
| //Clean up the files that were unzipped. | |
| //The shell command should be changed for the operating system, this is Mac/UNIX/Linux. |
| cd "~/Dropbox/Data/temp/" | |
| sysuse auto, clear | |
| save "~/Dropbox/Data/temp/auto1.dta", replace | |
| sysuse auto, clear | |
| save "~/Dropbox/Data/temp/auto2.dta", replace | |
| foreach file in auto1.dta auto2.dta { | |
| rsource using summary.R, roptions(--vanilla --slave --args `file') | |
| } |
| args<-commandArgs(TRUE) | |
| setwd("~/Dropbox/Data/temp/") | |
| library(readstata13) | |
| dat <- read.dta13(paste(args,sep = "")) | |
| summary(dat) | |
| save.dta13(dat, file=paste(args, "results.dta",sep = "_")) |
| from fabric.api import * | |
| #works on centos 6.7 64-bit digitalocean.com droplet | |
| env.hosts = ['XXX.XXX.XXX.XXX'] | |
| env.user = 'root' | |
| home = '/opt/kazoo_install' | |
| repo = '/opt/kazoo_install/community-scripts/simple-installer' | |
| def iptables(): | |
| run('iptables -F') | |
| run('iptables -X') |
| Homebrew build logs for elasticsearch on macOS 10.12.1 | |
| Build date: 2016-12-02 12:56:58 |
| #!/usr/bin/env python3 | |
| import requests | |
| from datetime import datetime, timedelta | |
| import json | |
| base = 'https://share.osf.io/api/v2/search/creativeworks/_search' | |
| keywords = 'neural networks' | |
| # simple query | |
| simp_query = {"query": {"query_string": {"query": keywords}}} |
| #!/usr/bin/env python3 | |
| import os | |
| import requests | |
| from bs4 import BeautifulSoup | |
| import pandas as pd | |
| from itertools import zip_longest | |
| census_key = os.environ.get("CENSUS_KEY") | |
| # base = 'http://api.census.gov/data/2011/acs5' |
Install Docker for Mac or Linux (or Windows). If Linux, then install docker-compose as well (it's automatically installed with Mac and Windows)
Next, create the testing folder.
mkdir openinfoman-test
cd openinfoman-test/
git clone https://github.com/openhie/openinfoman
openinfoman uses basex. basex is Java-based XML database, XQuery engine, and RestXQ web application framework. Installing openinfoman also installs basex.
Using a fresh Ubuntu 14.x install the openhie repository and then openinfoman. Accept the default options for openinfoman (heap size: default, url: leave blank, database: provider_directory).
This is a manual installation that follows as closely as possible the packaging in Debian except that it can run under any user and does not require superuser privileges. Requirements are a JRE, PHP, Git, wget, unzip.
# for example, on a fresh Ubuntu Linux
sudo apt-get install git wget unzip default-jre openjdk-7-jre php5
This is written for Bash, particularly the array declarations. So, modify if you need to use another shell.