I hereby claim:
- I am csjx on github.
- I am csjx (https://keybase.io/csjx) on keybase.
- I have a public key whose fingerprint is B4EE D58C 7628 9740 9043 5E08 C711 F430 69DC E3B7
To claim this, I am signing this object:
Christopher Jones csjx
csjx
/ keybase.md
Created
December 17, 2014 07:48
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| package org.dataone.tests; | |
| import java.io.File; | |
| import java.io.FileInputStream; | |
| import java.io.FileNotFoundException; | |
| import java.io.IOException; | |
| import java.io.InputStream; | |
| import java.net.URL; | |
| import org.dataone.service.types.v2.NodeList; |
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| [ERROR] 2016-03-13 20:59:46,237 (MNResourceHandler:handle:526) class java.lang.IllegalStateException: Hazelcast Instance is not active! | |
| java.lang.IllegalStateException: Hazelcast Instance is not active! | |
| at com.hazelcast.impl.FactoryImpl.initialChecks(FactoryImpl.java:728) | |
| at com.hazelcast.impl.MProxyImpl.beforeCall(MProxyImpl.java:102) | |
| at com.hazelcast.impl.MProxyImpl.get(MProxyImpl.java:112) | |
| at edu.ucsb.nceas.metacat.dataone.D1NodeService.isAuthoritativeMNodeAdmin(D1NodeService.java:875) | |
| at edu.ucsb.nceas.metacat.dataone.D1NodeService.isAuthorized(D1NodeService.java:1116) | |
| at edu.ucsb.nceas.metacat.dataone.D1NodeService.create(D1NodeService.java:393) | |
| at edu.ucsb.nceas.metacat.dataone.MNodeService.create(MNodeService.java:613) | |
| at edu.ucsb.nceas.metacat.restservice.v2.MNResourceHandler.putObject(MNResourceHandler.java:1535) |
csjx
/ gist:d856434b50409066118eb90b59f19cc8
Last active
August 3, 2016 18:08
CNIdentityLDAPImpl error message
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| In /var/log/tomcat7/cn.log | |
| [ WARN] 2016-08-03 17:43:06,740 (CNIdentityLDAPImpl:constructDn:690) Subject not a valid DN: http://orcid.org/0000-0002-8121-2341 | |
| [ WARN] 2016-08-03 17:43:06,767 (CNIdentityLDAPImpl:constructDn:690) Subject not a valid DN: http://orcid.org/0000-0003-1758-9950 | |
| [ WARN] 2016-08-03 17:43:06,791 (CNIdentityLDAPImpl:constructDn:690) Subject not a valid DN: http://orcid.org/0000-0003-2192-431X | |
| [ WARN] 2016-08-03 17:43:06,829 (CNIdentityLDAPImpl:constructDn:690) Subject not a valid DN: http://orcid.org/0000-0002-8121-2341 | |
| [ WARN] 2016-08-03 17:43:06,830 (CNIdentityLDAPImpl:constructDn:690) Subject not a valid DN: http://orcid.org/0000-0002-8121-2341 | |
| [ WARN] 2016-08-03 17:43:06,830 (CNIdentityLDAPImpl:constructDn:690) Subject not a valid DN: http://orcid.org/0000-0003-1758-9950 | |
| [ WARN] 2016-08-03 17:43:06,832 (CNIdentityLDAPImpl:constructDn:690) Subject not a valid DN: http://orcid.org/0000-0003-2192-431X | |
| [ WARN] 2016-08-03 17:43:06,833 (CNIdentityLDAPImpl:constructDn:690) Subject not a val |
csjx
/ XMLValidatorTest.java
Created
August 24, 2016 22:10
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| package org.dataone.tests; | |
| import java.io.File; | |
| import java.io.IOException; | |
| import java.io.InputStream; | |
| import java.net.MalformedURLException; | |
| import java.net.URL; | |
| import javax.xml.XMLConstants; | |
| import javax.xml.parsers.DocumentBuilder; |
csjx
/ D1LibclientTimeoutTest.java
Last active
September 14, 2016 15:54
An example showing http connection timeout issues with d1_libclient_java v2.2.0, httpclient 4.3.6
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| package org.dataone.tests; | |
| import java.io.InputStream; | |
| import java.util.ArrayList; | |
| import java.util.List; | |
| import org.dataone.client.v2.itk.D1Client; | |
| import org.dataone.client.v2.MNode; | |
| import org.dataone.service.exceptions.BaseException; | |
| import org.dataone.service.exceptions.ServiceFailure; |
csjx
/ rdf-modify-test.html
Created
April 6, 2017 15:03
An example of modifying an RDF graph to test an rdflib.js problem
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| <!DOCTYPE html> | |
| <html lang="en"> | |
| <head> | |
| <title>RDF Test</title> | |
| <script type="text/javascript" src="components/rdflib.js"></script> | |
| <script type="text/javascript" src="components/jquery.js"></script> | |
| <script type="text/javascript" src="components/underscore.js"></script> | |
| <script type="text/javascript" src="rdf-modify-test.js"></script> | |
| </head> | |
| <body onload = "RDFTest.run()"> |
csjx
/ dataone-node-operation-dates.R
Last active
September 6, 2017 15:44
An R script that queries the DataONE Node Registry and extracts a list of dates when each MN became operational
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| # Query the DataONE Node Registry to find dates that Member Nodes began operation | |
| # The DataONE Node registry service returns results as XML | |
| library(httr) | |
| library(xml2) | |
| # The base URL for the DataONE Coordinating Node | |
| cn_base_url <- "https://cn.dataone.org/cn" | |
| # The node registry endpoint |
csjx
/ dataone-node-operation-dates.R
Created
September 6, 2017 07:26
An R script that queries the DataONE Node Registry and extracts a list of dates when each MN became operational
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| # Query the DataONE Node Registry to find dates that Member Nodes began operation | |
| # The DataONE Node registry service returns results as XML | |
| library(httr) | |
| library(xml2) | |
| # The base URL for the DataONE Coordinating Node | |
| cn_base_url <- "https://cn.dataone.org/cn" | |
| # The Solr query service endpoint |
csjx
/ File 1: dataone-package-upload-example.rst
Last active
March 27, 2024 17:32
Using the DataONE API on the command line
Table of Contents
This is an example of how to upload content into a repository that implements the DataONE Tier 3 MNStorage API. We focus on a simple yet complete data package example that involves two CSV data files, one EML metadata file, and one OAI-ORE resource map file. This example is based on content in the following published dataset, but has some changes to simplify the example:
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