cwsmith

#include <algorithm>
#include <limits.h>
#include <time.h>
#include <stdlib.h>
#include <mpi.h>
#include <assert.h>

#include <map>

#include "mis.h"

cwsmith

cwsmith@jenga:testMIS$ mpirun -np 4 ./testMIS 
|V| = 4
running test_EastWestNet_EastWestAdjacent...
[0] has nbor 3
[0] has nbor 1
DEBUG bsp after [0] sending to 1
DEBUG bsp after [0] sending to 3
DEBUG [0] sending to 3 (3)
DEBUG [0] sending to 1 (1)
[1] has nbor 0

cwsmith

#include <stdio.h>
#include <set>
#include <vector>
#include "mis.h"
#include "mpi.h"

using std::set;
using std::vector;

/**

cwsmith

mis.h
==================
#define PARMA_MAJOR_VERSION 1
#define PARMA_MINOR_VERSION 0
#define PARMA_PATCH_VERSION 170:177M

void mis_init(int randNumSeed, const char* maj, const char* min, const char* patch);

//#define misInit(seed) printf("misInit: %d\n", seed)
#define misInit(seed) mis_init(seed, PARMA_MAJOR_VERSION, PARMA_MINOR_VERSION, PARMA_PATCH_VERSION)

cwsmith

#!/bin/bash
#This is a build script for the SCOREC software stack.
#users should first modify the CC, CXX, and FC variables below:
#set the C and C++ compilers to point at MPI compiler wrappers
export CC="not set"
export CXX="not set"
export FC="not set"
PREFIX="not set"
DEBUG='-g '
BUILD_DIR="not set"

cwsmith

module load xl
mpicxx mallocStatsTest.cc -o mallocStatsTestXL

cwsmith

/* This program should be run on a single Blue Gene/Q node
 * using 5 or more parallel processes and 8 threads per process.
 * Run the program with:
 *   mpirun -np 5 ./deadlock 8
 * where 8 specifies number of threads per process.
 * It has a high probability of going into a deadlocked state
 * (or at least timing out at 5~10 minutes).
 * The probability increases as LOOPS is increased. */

#include <mpi.h>

cwsmith

#include <mpi.h>
#include <stdio.h>
#include <stdlib.h>
#include <string.h>

int main(int argc, char **argv) {
  int rank, nprocs;
  MPI_File file;
  MPI_Init(&argc, &argv);
  MPI_Comm_size(MPI_COMM_WORLD, &nprocs);

cwsmith

cd /work/02422/cwsmith/phastaShared/phastaGH/buildIntel15/phSolver/compressible \

/opt/apps/intel/15/composer_xe_2015.2.164/bin/intel64/icpc \
-mmic \
-g \
CMakeFiles/phastaC.exe.dir/main.c.o \
-o \
../../bin/phastaC.exe \
-rdynamic \
/opt/apps/intel15/impi/5.0.2.044/mic/lib/libmpicxx.so \

cwsmith

TACC: Starting up job 5198658
TACC: Starting parallel tasks...
# Command used to run job in: /home1/02422/cwsmith/.slurm/job.5198658.runcmd.QH2ZVF1r 
[0] MPI startup(): Multi-threaded optimized library
[0] DAPL startup(): trying to open DAPL provider from I_MPI_DAPL_PROVIDER: ofa-v2-mlx4_0-1u
[1] DAPL startup(): trying to open DAPL provider from I_MPI_DAPL_PROVIDER: ofa-v2-mlx4_0-1u
[2] DAPL startup(): trying to open DAPL provider from I_MPI_DAPL_PROVIDER: ofa-v2-mlx4_0-1u
[3] DAPL startup(): trying to open DAPL provider from I_MPI_DAPL_PROVIDER: ofa-v2-mlx4_0-1u
[4] DAPL startup(): trying to open DAPL provider from I_MPI_DAPL_PROVIDER: ofa-v2-mlx4_0-1u
[5] DAPL startup(): trying to open DAPL provider from I_MPI_DAPL_PROVIDER: ofa-v2-mlx4_0-1u