Siddhartha Basu cybersiddhu

## labeledarrow.html
<!DOCTYPE HTML>
<html lang="en">

    <head>
        <meta charset="UTF-8">
        <title></title>
        <script src="http://d3js.org/d3.v2.js"></script>
        <style>
line.arrow {
    stroke: #666;

## README.md

      
              4 files
            
          
              0 forks
            
          
              0 comments
            
          
              0 stars
            
          
                cybersiddhu
                / README.md
            
            
              Created
              April 25, 2014 17:16
                — forked from mbostock/.block
            
          
    This example demonstrates how to prevent D3’s force layout from moving nodes that have been repositioned by the user. When the force layout’s drag behavior dispatches a dragstart event, the fixed property of the dragged node is set to true. This prevents the force layout from subsequently changing the position of the node (due to forces). Double-click to release a node.
Internally, the force layout uses three bits to control whether a node is fixed. The first bit can be set externally, as in this example. The second and third bits are set on mouseover and mousedown, respectively, so that nodes are fixed temporarily during dragging. Although the second and third bits are automatically cleared when dragging ends, the first bit stays true in this example, and thus nodes remain fixed after dragging.
Also note that the force layout resumes au

  
## backup_docker.py
#!/usr/bin/env python3
"""Backs up data-only volumes to host backup directory using rdiff-backup.

First create a Docker image containing rdiff-backup (named rdiff-backup)
Dockerfile:

    FROM ubuntu:precise
    RUN apt-get update && apt-install -qy rdiff-backup

``docker build -rm -t rdiff-backup .``

## docker_cheat.md

      
              1 file
            
          
              0 forks
            
          
              0 comments
            
          
              0 stars
            
          
                cybersiddhu
                / docker_cheat.md
            
            
              Created
              January 9, 2014 21:18
                — forked from wsargent/docker_cheat.md
            
          
    Docker Cheat Sheet

Why

Why Should I Care (For Developers)

"Docker interests me because it allows simple environment isolation and repeatability. I can create a run-time environment once, package it up, then run it again on any other machine. Furthermore, everything that runs in that environment is isolated from the underlying host (much like a virtual machine). And best of all, everything is fast and simple."

TL;DR, I just want a dev environment


## basecompl.go
// --------------------------------------------------------------------
// Dummy processing DNA code (by taking base complement)
// Sequential version
// Author: Samuel Lampa, samuel.lampa@gmail.com
// Date: 2013-06-21
// --------------------------------------------------------------------

package main

import (

## d3js_animated_bar.html
<!doctype html>
 <meta charset="utf-8">
  <head>
    <title> Animated bar graph with d3</title>
   <style type="text/css">
   		 div.aBar {
   		 	  margin-top: 100px;
   		 	  margin-left: 100px;
   		 }
   </style>

## pseudogene_issue.py
import sys, os, string
if len(sys.argv) != 2:
	print 'You seem to have forgotten to provide the input GFF3 file.'
	exit()

if __name__ == "__main__":
	found = False
	with open(sys.argv[1],  'r') as file:
	  outfile = open(os.path.basename(sys.argv[1]).replace(".gff",  "_corrected.gff"),  'w')
	  for line in file:

## .locallibrc
if [ "$(type -t cd)" == "builtin" ]; then
    local func="_perl_locallib_orig_cd() { builtin cd \"\$@\"; }"
else
    local func="$(declare -f cd)"
    local func="_perl_locallib_orig_cd${func#cd}"
fi
eval $func

_perl_locallib_custom_cd() {
    local cwd=$(pwd)

## git_fix_author
#!/bin/bash

export $authors_file=author-conv-file

git filter-branch -f --env-filter '

get_name () {
    grep "^$1=" "$authors_file" |
        sed "s/^.*=\(.*\) <.*>$/\1/"
}

## myboardgame.pl
#!/usr/bin/perl
use strict;
use Image::Magick;

# auxiliary variables
my $img_id = 0;                #loop index
my @ordered_squares;
my $rotation = 180;

#Width and Height of each box, squares per side
	<!DOCTYPE HTML>
	<html lang="en">

	<head>
	<meta charset="UTF-8">
	<title></title>
	<script src="http://d3js.org/d3.v2.js"></script>
	<style>
	line.arrow {
	stroke: #666;
	#!/usr/bin/env python3
	"""Backs up data-only volumes to host backup directory using rdiff-backup.

	First create a Docker image containing rdiff-backup (named rdiff-backup)
	Dockerfile:

	FROM ubuntu:precise
	RUN apt-get update && apt-install -qy rdiff-backup

	``docker build -rm -t rdiff-backup .``
	// --------------------------------------------------------------------
	// Dummy processing DNA code (by taking base complement)
	// Sequential version
	// Author: Samuel Lampa, samuel.lampa@gmail.com
	// Date: 2013-06-21
	// --------------------------------------------------------------------

	package main

	import (
	import sys, os, string
	if len(sys.argv) != 2:
	print 'You seem to have forgotten to provide the input GFF3 file.'
	exit()

	if __name__ == "__main__":
	found = False
	with open(sys.argv[1], 'r') as file:
	outfile = open(os.path.basename(sys.argv[1]).replace(".gff", "_corrected.gff"), 'w')
	for line in file:
	if [ "$(type -t cd)" == "builtin" ]; then
	local func="_perl_locallib_orig_cd() { builtin cd \"\$@\"; }"
	else
	local func="$(declare -f cd)"
	local func="_perl_locallib_orig_cd${func#cd}"
	fi
	eval $func

	_perl_locallib_custom_cd() {
	local cwd=$(pwd)
	#!/bin/bash

	export $authors_file=author-conv-file

	git filter-branch -f --env-filter '

	get_name () {
	grep "^$1=" "$authors_file" \|
	sed "s/^.=\(.\) <.*>$/\1/"
	}
	#!/usr/bin/perl
	use strict;
	use Image::Magick;

	# auxiliary variables
	my $img_id = 0; #loop index
	my @ordered_squares;
	my $rotation = 180;

	#Width and Height of each box, squares per side