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Created June 24, 2015 14:43
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EasyBuild test report for easyconfigs PR #1741
Raw
easybuild_test_report_easyconfigs_pr1741_20154324-UTC-14-43-49.md

Test report for easybuilders/easybuild-easyconfigs#1741

Test result

Build succeeded for 0 out of 1 (1 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

Time info

  • start: Wed, 24 Jun 2015 14:43:26 +0000 (UTC)
  • end: Wed, 24 Jun 2015 14:43:48 +0000 (UTC)

EasyBuild info

  • easybuild-framework version: 2.1.1
  • easybuild-easyblocks version: 2.1.1
  • command line:
eb --from-pr=1741 --github-user=npklein --upload-test-report -dfr --test-report-env-filter=^SSH|USER|HOSTNAME|UID|.*COOKIE.*
  • full configuration (includes defaults):
--buildpath=/apps//.tmp/easybuild/builds/
--cleanup-builddir
--debug
--disable-allow-modules-tool-mismatch
--disable-avail-cfgfile-constants
--disable-avail-easyconfig-constants
--disable-avail-easyconfig-licenses
--disable-avail-easyconfig-templates
--disable-avail-module-naming-schemes
--disable-avail-modules-tools
--disable-avail-repositories
--disable-dry-run
--disable-dry-run-short
--disable-experimental
--disable-hidden
--disable-ignore-osdeps
--disable-info
--disable-job
--disable-list-toolchains
--disable-logtostdout
--disable-module-only
--disable-pretend
--disable-quiet
--disable-recursive-module-unload
--disable-regtest
--disable-sequential
--disable-set-gid-bit
--disable-show-default-configfiles
--disable-show-default-moduleclasses
--disable-skip
--disable-skip-test-cases
--disable-sticky-bit
--external-modules-metadata=""
--force
--from-pr=1741
--github-user=npklein
--ignore-dirs=.git,.svn
--installpath=/apps/
--logfile-format=easybuild,easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log
--module-naming-scheme=EasyBuildMNS
--module-syntax=Tcl
--moduleclasses="['base', 'bio', 'cae', 'chem', 'compiler', 'data', 'debugger', 'devel', 'geo', 'ide', 'lang', 'lib', 'math', 'mpi', 'numlib', 'perf', 'phys', 'system', 'toolchain', 'tools', 'vis']"
--modules-tool=Lmod
--repository=FileRepository
--repositorypath=/home/umcg-ndeklein/.local/easybuild/ebfiles_repo
--robot-paths=""
--robot=/apps/software/EasyBuild/2.1.1/lib/python2.6/site-packages/easybuild_easyconfigs-2.1.1-py2.6.egg/easybuild/easyconfigs
--sourcepath=/apps//sources/
--strict=warn
--subdir-modules=modules
--subdir-software=software
--suffix-modules-path=all
--test-report-env-filter=^SSH|USER|HOSTNAME|UID|.*COOKIE.*
--umask=002
--update-modules-tool-cache
--upload-test-report

System info

  • core count: 48
  • cpu model: Intel(R) Xeon(R) CPU E5-2697 v2 @ 2.70GHz
  • cpu speed: 2700.075
  • cpu vendor: Intel
  • gcc version: Using built-in specs.; COLLECT_GCC=gcc; COLLECT_LTO_WRAPPER=/apps/software/GCC/4.8.4/libexec/gcc/x86_64-unknown-linux-gnu/4.8.4/lto-wrapper; Target: x86_64-unknown-linux-gnu; Configured with: ../configure --enable-languages=c,c++,fortran --enable-lto --enable-checking=release --disable-multilib --enable-shared=yes --enable-static=yes --enable-threads=posix --enable-gold=default --enable-plugins --enable-ld --with-plugin-ld=ld.gold --enable-bootstrap --prefix=/apps/software/GCC/4.8.4 --with-local-prefix=/apps/software/GCC/4.8.4; Thread model: posix; gcc version 4.8.4 (GCC) ;
  • glibc version: 2.12
  • hostname: calculon
  • os name: SL
  • os type: Linux
  • os version: 6.6
  • platform name: x86_64-unknown-linux
  • python version: 2.7.9 (default, Jun 10 2015, 17:17:55) ; [GCC 4.8.4]
  • system gcc path: /apps/software/GCC/4.8.4/bin/gcc
  • system python path: /apps/software/Python/2.7.9-goolf-1.7.20/bin/python

List of loaded modules

  • EasyBuild/2.1.1
  • GCC/4.8.4
  • numactl/2.0.10-GCC-4.8.4
  • hwloc/1.10.1-GCC-4.8.4
  • OpenMPI/1.8.4-GCC-4.8.4
  • OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0
  • gompi/1.7.20
  • FFTW/3.3.4-gompi-1.7.20
  • ScaLAPACK/2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0
  • goolf/1.7.20
  • bzip2/1.0.6-goolf-1.7.20
  • zlib/1.2.8-goolf-1.7.20
  • libreadline/6.3-goolf-1.7.20
  • ncurses/5.9-goolf-1.7.20
  • Python/2.7.9-goolf-1.7.20

Environment

BASH_ENV = /usr/share/lmod/lmod/init/bash
BASH_FUNC_module() = () {  eval $($LMOD_CMD bash "$@");
 [ $? = 0 ] && eval $(${LMOD_SETTARG_CMD:-:} -s sh)
}
CPATH = /apps/software/Python/2.7.9-goolf-1.7.20/include:/apps/software/ncurses/5.9-goolf-1.7.20/include:/apps/software/libreadline/6.3-goolf-1.7.20/include:/apps/software/zlib/1.2.8-goolf-1.7.20/include:/apps/software/bzip2/1.0.6-goolf-1.7.20/include:/apps/software/ScaLAPACK/2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0/include:/apps/software/FFTW/3.3.4-gompi-1.7.20/include:/apps/software/OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0/include:/apps/software/OpenMPI/1.8.4-GCC-4.8.4/include:/apps/software/hwloc/1.10.1-GCC-4.8.4/include:/apps/software/numactl/2.0.10-GCC-4.8.4/include:/apps/software/GCC/4.8.4/include
CVS_RSH = ssh
EASYBUILD_BUILDPATH = /apps//.tmp/easybuild/builds/
EASYBUILD_INSTALLPATH = /apps/
EASYBUILD_MODULES_TOOL = Lmod
EASYBUILD_SOURCEPATH = /apps//sources/
EBDEVELBZIP2 = /apps/software/bzip2/1.0.6-goolf-1.7.20/easybuild/bzip2-1.0.6-goolf-1.7.20-easybuild-devel
EBDEVELEASYBUILD = /apps/software/EasyBuild/2.1.1/easybuild/EasyBuild-2.1.1-easybuild-devel
EBDEVELFFTW = /apps/software/FFTW/3.3.4-gompi-1.7.20/easybuild/FFTW-3.3.4-gompi-1.7.20-easybuild-devel
EBDEVELGCC = /apps/software/GCC/4.8.4/easybuild/GCC-4.8.4-easybuild-devel
EBDEVELGOMPI = /apps/software/gompi/1.7.20/easybuild/gompi-1.7.20-easybuild-devel
EBDEVELGOOLF = /apps/software/goolf/1.7.20/easybuild/goolf-1.7.20-easybuild-devel
EBDEVELHWLOC = /apps/software/hwloc/1.10.1-GCC-4.8.4/easybuild/hwloc-1.10.1-GCC-4.8.4-easybuild-devel
EBDEVELLIBREADLINE = /apps/software/libreadline/6.3-goolf-1.7.20/easybuild/libreadline-6.3-goolf-1.7.20-easybuild-devel
EBDEVELNCURSES = /apps/software/ncurses/5.9-goolf-1.7.20/easybuild/ncurses-5.9-goolf-1.7.20-easybuild-devel
EBDEVELNUMACTL = /apps/software/numactl/2.0.10-GCC-4.8.4/easybuild/numactl-2.0.10-GCC-4.8.4-easybuild-devel
EBDEVELOPENBLAS = /apps/software/OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0/easybuild/OpenBLAS-0.2.13-GCC-4.8.4-LAPACK-3.5.0-easybuild-devel
EBDEVELOPENMPI = /apps/software/OpenMPI/1.8.4-GCC-4.8.4/easybuild/OpenMPI-1.8.4-GCC-4.8.4-easybuild-devel
EBDEVELPYTHON = /apps/software/Python/2.7.9-goolf-1.7.20/easybuild/Python-2.7.9-goolf-1.7.20-easybuild-devel
EBDEVELSCALAPACK = /apps/software/ScaLAPACK/2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0/easybuild/ScaLAPACK-2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0-easybuild-devel
EBDEVELZLIB = /apps/software/zlib/1.2.8-goolf-1.7.20/easybuild/zlib-1.2.8-goolf-1.7.20-easybuild-devel
EBEXTSLISTPYTHON = requests-2.6.2,setuptools-11.3.1,pip-6.0.6,nose-1.3.4,numpy-1.9.1,scipy-0.14.1,blist-1.3.6,mpi4py-1.3.1,paycheck-1.0.2,argparse-1.2.1,pbr-0.10.8,lockfile-0.10.2,Cython-0.21.2,six-1.9.0,dateutil-2.4.0,deap-1.0.1,decorator-3.4.0,arff-2.0.1,pycrypto-2.6.1,ecdsa-0.11,paramiko-1.15.2,pyparsing-2.0.3,netifaces-0.10.4,netaddr-0.7.13,mock-1.0.1,pytz-2014.10,pandas-0.16.0
EBROOTBZIP2 = /apps/software/bzip2/1.0.6-goolf-1.7.20
EBROOTEASYBUILD = /apps/software/EasyBuild/2.1.1
EBROOTFFTW = /apps/software/FFTW/3.3.4-gompi-1.7.20
EBROOTGCC = /apps/software/GCC/4.8.4
EBROOTGOMPI = /apps/software/gompi/1.7.20
EBROOTGOOLF = /apps/software/goolf/1.7.20
EBROOTHWLOC = /apps/software/hwloc/1.10.1-GCC-4.8.4
EBROOTLIBREADLINE = /apps/software/libreadline/6.3-goolf-1.7.20
EBROOTNCURSES = /apps/software/ncurses/5.9-goolf-1.7.20
EBROOTNUMACTL = /apps/software/numactl/2.0.10-GCC-4.8.4
EBROOTOPENBLAS = /apps/software/OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0
EBROOTOPENMPI = /apps/software/OpenMPI/1.8.4-GCC-4.8.4
EBROOTPYTHON = /apps/software/Python/2.7.9-goolf-1.7.20
EBROOTSCALAPACK = /apps/software/ScaLAPACK/2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0
EBROOTZLIB = /apps/software/zlib/1.2.8-goolf-1.7.20
EBVERSIONBZIP2 = 1.0.6
EBVERSIONEASYBUILD = 2.1.1
EBVERSIONFFTW = 3.3.4
EBVERSIONGCC = 4.8.4
EBVERSIONGOMPI = 1.7.20
EBVERSIONGOOLF = 1.7.20
EBVERSIONHWLOC = 1.10.1
EBVERSIONLIBREADLINE = 6.3
EBVERSIONNCURSES = 5.9
EBVERSIONNUMACTL = 2.0.10
EBVERSIONOPENBLAS = 0.2.13
EBVERSIONOPENMPI = 1.8.4
EBVERSIONPYTHON = 2.7.9
EBVERSIONSCALAPACK = 2.0.2
EBVERSIONZLIB = 1.2.8
G_BROKEN_FILENAMES = 1
HISTCONTROL = ignoredups
HISTSIZE = 1000
HOME = /home/umcg-ndeklein
HPC_ENV_PREFIX = /apps/
LANG = en_US.UTF-8
LC_ALL = en_US.UTF-8
LC_CTYPE = UTF-8
LD_LIBRARY_PATH = /apps/software/Python/2.7.9-goolf-1.7.20/lib:/apps/software/ncurses/5.9-goolf-1.7.20/lib:/apps/software/libreadline/6.3-goolf-1.7.20/lib:/apps/software/zlib/1.2.8-goolf-1.7.20/lib:/apps/software/bzip2/1.0.6-goolf-1.7.20/lib:/apps/software/ScaLAPACK/2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0/lib:/apps/software/FFTW/3.3.4-gompi-1.7.20/lib:/apps/software/OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0/lib:/apps/software/OpenMPI/1.8.4-GCC-4.8.4/lib:/apps/software/hwloc/1.10.1-GCC-4.8.4/lib:/apps/software/numactl/2.0.10-GCC-4.8.4/lib:/apps/software/GCC/4.8.4/lib/gcc/x86_64-unknown-linux-gnu/4.8.4:/apps/software/GCC/4.8.4/lib64:/apps/software/GCC/4.8.4/lib:/apps/software/EasyBuild/2.1.1/lib
LESSOPEN = ||/usr/bin/lesspipe.sh %s
LIBRARY_PATH = /apps/software/Python/2.7.9-goolf-1.7.20/lib:/apps/software/ncurses/5.9-goolf-1.7.20/lib:/apps/software/libreadline/6.3-goolf-1.7.20/lib:/apps/software/zlib/1.2.8-goolf-1.7.20/lib:/apps/software/bzip2/1.0.6-goolf-1.7.20/lib:/apps/software/ScaLAPACK/2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0/lib:/apps/software/FFTW/3.3.4-gompi-1.7.20/lib:/apps/software/OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0/lib:/apps/software/OpenMPI/1.8.4-GCC-4.8.4/lib:/apps/software/hwloc/1.10.1-GCC-4.8.4/lib:/apps/software/numactl/2.0.10-GCC-4.8.4/lib:/apps/software/GCC/4.8.4/lib64:/apps/software/GCC/4.8.4/lib:/apps/software/EasyBuild/2.1.1/lib
LMOD_CMD = /usr/share/lmod/lmod/libexec/lmod
LMOD_COLORIZE = yes
LMOD_DEFAULT_MODULEPATH = /apps/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/Modules/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
LMOD_DIR = /usr/share/lmod/lmod/libexec
LMOD_FULL_SETTARG_SUPPORT = no
LMOD_PKG = /usr/share/lmod/lmod
LMOD_PREPEND_BLOCK = normal
LMOD_SETTARG_CMD = :
LMOD_arch = x86_64
LMOD_sys = Linux
LOADEDMODULES = EasyBuild/2.1.1:GCC/4.8.4:numactl/2.0.10-GCC-4.8.4:hwloc/1.10.1-GCC-4.8.4:OpenMPI/1.8.4-GCC-4.8.4:OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0:gompi/1.7.20:FFTW/3.3.4-gompi-1.7.20:ScaLAPACK/2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0:goolf/1.7.20:bzip2/1.0.6-goolf-1.7.20:zlib/1.2.8-goolf-1.7.20:libreadline/6.3-goolf-1.7.20:ncurses/5.9-goolf-1.7.20:Python/2.7.9-goolf-1.7.20
LOGNAME = umcg-ndeklein
LS_COLORS = rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lz=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.bz=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.rar=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45:
MAIL = /var/spool/mail/umcg-ndeklein
MANPATH = /apps/software/Python/2.7.9-goolf-1.7.20/share/man:/apps/software/ncurses/5.9-goolf-1.7.20/man:/apps/software/libreadline/6.3-goolf-1.7.20/share/man:/apps/software/zlib/1.2.8-goolf-1.7.20/share/man:/apps/software/bzip2/1.0.6-goolf-1.7.20/man:/apps/software/FFTW/3.3.4-gompi-1.7.20/share/man:/apps/software/OpenMPI/1.8.4-GCC-4.8.4/share/man:/apps/software/hwloc/1.10.1-GCC-4.8.4/share/man:/apps/software/numactl/2.0.10-GCC-4.8.4/share/man:/apps/software/GCC/4.8.4/share/man:/usr/share/lmod/lmod/share/man
MODULEPATH = /apps/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/Modules/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
MODULEPATH_ROOT = /usr/share/modulefiles
MODULESHOME = /usr/share/lmod/lmod
PATH = /apps/software/Python/2.7.9-goolf-1.7.20/bin:/apps/software/ncurses/5.9-goolf-1.7.20/bin:/apps/software/libreadline/6.3-goolf-1.7.20/bin:/apps/software/bzip2/1.0.6-goolf-1.7.20/bin:/apps/software/FFTW/3.3.4-gompi-1.7.20/bin:/apps/software/OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0/bin:/apps/software/OpenMPI/1.8.4-GCC-4.8.4/bin:/apps/software/hwloc/1.10.1-GCC-4.8.4/bin:/apps/software/numactl/2.0.10-GCC-4.8.4/bin:/apps/software/GCC/4.8.4/bin:/apps/software/EasyBuild/2.1.1/bin:/usr/share/lmod/lmod/libexec:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/home/umcg-ndeklein/bin
PKG_CONFIG_PATH = /apps/software/Python/2.7.9-goolf-1.7.20/lib/pkgconfig:/apps/software/zlib/1.2.8-goolf-1.7.20/lib/pkgconfig:/apps/software/FFTW/3.3.4-gompi-1.7.20/lib/pkgconfig:/apps/software/OpenMPI/1.8.4-GCC-4.8.4/lib/pkgconfig:/apps/software/hwloc/1.10.1-GCC-4.8.4/lib/pkgconfig
PWD = /apps/sources/EasyBuild/custom
PYTHONPATH = /apps/software/EasyBuild/2.1.1/lib/python2.6/site-packages
QTDIR = /usr/lib64/qt-3.3
QTINC = /usr/lib64/qt-3.3/include
QTLIB = /usr/lib64/qt-3.3/lib
SHELL = /bin/bash
SHLVL = 2
TERM = xterm-256color
_ = /apps/software/Python/2.7.9-goolf-1.7.20/bin/python
_LMFILES_ = /apps/modules/all/EasyBuild/2.1.1:/apps/modules/all/GCC/4.8.4:/apps/modules/all/numactl/2.0.10-GCC-4.8.4:/apps/modules/all/hwloc/1.10.1-GCC-4.8.4:/apps/modules/all/OpenMPI/1.8.4-GCC-4.8.4:/apps/modules/all/OpenBLAS/0.2.13-GCC-4.8.4-LAPACK-3.5.0:/apps/modules/all/gompi/1.7.20:/apps/modules/all/FFTW/3.3.4-gompi-1.7.20:/apps/modules/all/ScaLAPACK/2.0.2-gompi-1.7.20-OpenBLAS-0.2.13-LAPACK-3.5.0:/apps/modules/all/goolf/1.7.20:/apps/modules/all/bzip2/1.0.6-goolf-1.7.20:/apps/modules/all/zlib/1.2.8-goolf-1.7.20:/apps/modules/all/libreadline/6.3-goolf-1.7.20:/apps/modules/all/ncurses/5.9-goolf-1.7.20:/apps/modules/all/Python/2.7.9-goolf-1.7.20
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