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September 19, 2021 21:14
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(partial) EasyBuild log for failed build of /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb (PR(s) #14017)
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| == 2021-09-19 21:57:41,659 easyblock.py:285 INFO This is EasyBuild 4.4.2.dev0 (framework: 4.4.2.dev0, easyblocks: 4.4.2.dev0) on host nuc.lan. | |
| == 2021-09-19 21:57:41,659 easyblock.py:291 INFO This is easyblock MesonNinja from module easybuild.easyblocks.generic.mesonninja (/mnt/ds918plus/eb/nuc-fedora32/software/EasyBuild/20210825-dev/lib/python3.9/site-packages/easybuild/easyblocks/generic/mesonninja.py) | |
| == 2021-09-19 21:57:41,659 easyblock.py:937 INFO Build dir set to /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0 | |
| == 2021-09-19 21:57:41,659 config.py:618 DEBUG software install path as specified by 'installpath' and 'subdir_software': /mnt/ds918plus/eb/nuc-fedora32/software | |
| == 2021-09-19 21:57:41,659 easyconfig.py:2612 DEBUG Determining software installation subdir for GLib EasyConfig @ /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb | |
| == 2021-09-19 21:57:41,659 easyconfig.py:2615 DEBUG Using fixed naming software installation subdir: GLib/2.69.1-GCCcore-11.2.0 | |
| == 2021-09-19 21:57:41,660 easyblock.py:997 INFO Software install dir set to /mnt/ds918plus/eb/nuc-fedora32/software/GLib/2.69.1-GCCcore-11.2.0 | |
| == 2021-09-19 21:57:41,660 config.py:618 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /mnt/ds918plus/eb/nuc-fedora32/modules | |
| == 2021-09-19 21:57:41,660 easyblock.py:1002 INFO Module install dir set to /mnt/ds918plus/eb/nuc-fedora32/modules/all | |
| == 2021-09-19 21:57:41,660 easyblock.py:270 INFO Init completed for application name GLib version 2.69.1 | |
| == 2021-09-19 21:57:41,660 easyblock.py:3676 INFO Obtained application instance of for GLib (easyblock: MesonNinja) | |
| == 2021-09-19 21:57:41,660 easyblock.py:3689 DEBUG Skip set to False | |
| == 2021-09-19 21:57:41,660 easyconfig.py:1661 INFO Generating template values... | |
| == 2021-09-19 21:57:41,660 templates.py:189 DEBUG config: GLib EasyConfig @ /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb | |
| == 2021-09-19 21:57:41,660 templates.py:216 DEBUG version found in easyconfig is 2.69.1 | |
| == 2021-09-19 21:57:41,660 systemtools.py:1061 DEBUG Version is already a string ('3.9.6'), OK | |
| == 2021-09-19 21:57:41,660 templates.py:318 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2021-09-19 21:57:41,660 templates.py:318 DEBUG name: github_account, config: %(namelower)s | |
| == 2021-09-19 21:57:41,660 templates.py:318 DEBUG name: name, config: GLib | |
| == 2021-09-19 21:57:41,660 templates.py:318 DEBUG name: parallel, config: None | |
| == 2021-09-19 21:57:41,660 templates.py:318 DEBUG name: version, config: 2.69.1 | |
| == 2021-09-19 21:57:41,660 templates.py:318 DEBUG name: versionsuffix, config: | |
| == 2021-09-19 21:57:41,660 templates.py:318 DEBUG name: versionprefix, config: | |
| == 2021-09-19 21:57:41,660 easyconfig.py:1680 INFO Template values: arch='x86_64', bitbucket_account='glib', github_account='glib', module_name='GLib/2.69.1-GCCcore-11.2.0', name='GLib', nameletter='G', nameletterlower='g', namelower='glib', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', toolchain_name='GCCcore', toolchain_version='11.2.0', version='2.69.1', version_major='2', version_major_minor='2.69', version_minor='69', versionprefix='', versionsuffix='' | |
| == 2021-09-19 21:57:41,661 one.py:145 DEBUG Not copying '__builtins__' variable from parsed easyconfig | |
| == 2021-09-19 21:57:41,661 one.py:524 DEBUG Extracted comments: | |
| {'above': {'preconfigopts': ['# avoid using hardcoded path to Python binary in build step']}, | |
| 'header': [], | |
| 'inline': {}, | |
| 'iterabove': {'builddependencies': {" ('Python', '3.9.6'),": ['# Python is required for building against GLib, at ' | |
| 'least when', | |
| '# gdbus-codegen or one of the other python scripts ' | |
| 'are used.', | |
| '# Since Meson 0.50 and later are Python >=3.5 only ' | |
| "we can't build", | |
| '# Python specific versions of GLib that uses Python ' | |
| '2.x', | |
| '# thus Python should not be a runtime dependency ' | |
| 'for GLib.', | |
| '# Packages that use GLib should either have an ' | |
| 'explicit', | |
| '# (build)dependency on Python or it will use the ' | |
| 'system version', | |
| '# EasyBuild itself uses.']}}, | |
| 'iterinline': {}, | |
| 'tail': []} | |
| == 2021-09-19 21:57:41,661 one.py:175 INFO Skipping reformatting value for parameter 'toolchain' | |
| == 2021-09-19 21:57:41,661 one.py:175 INFO Skipping reformatting value for parameter 'toolchainopts' | |
| == 2021-09-19 21:57:41,662 easyconfig.py:1227 DEBUG Dumped easyconfig: easyblock = 'MesonNinja' | |
| name = 'GLib' | |
| version = '2.69.1' | |
| homepage = 'https://www.gtk.org/' | |
| description = "GLib is one of the base libraries of the GTK+ project" | |
| toolchain = {'name': 'GCCcore', 'version': '11.2.0'} | |
| toolchainopts = {'pic': True} | |
| source_urls = [FTPGNOME_SOURCE] | |
| sources = [SOURCELOWER_TAR_XZ] | |
| checksums = ['f92f34057a091fc8638d91f10cece842cb8618e9a1090b0ddb19cc15a21bf39c'] | |
| builddependencies = [ | |
| # Python is required for building against GLib, at least when | |
| # gdbus-codegen or one of the other python scripts are used. | |
| # Since Meson 0.50 and later are Python >=3.5 only we can't build | |
| # Python specific versions of GLib that uses Python 2.x | |
| # thus Python should not be a runtime dependency for GLib. | |
| # Packages that use GLib should either have an explicit | |
| # (build)dependency on Python or it will use the system version | |
| # EasyBuild itself uses. | |
| ('Python', '3.9.6'), | |
| ('Meson', '0.58.2'), | |
| ('Ninja', '1.10.2'), | |
| ('binutils', '2.37'), | |
| ('pkg-config', '0.29.2'), | |
| ] | |
| dependencies = [ | |
| ('libffi', '3.4.2'), | |
| ('gettext', '0.21'), | |
| ('libxml2', '2.9.10'), | |
| ('PCRE', '8.45'), | |
| ('util-linux', '2.37'), | |
| ] | |
| # avoid using hardcoded path to Python binary in build step | |
| preconfigopts = "export PYTHON=python && " | |
| configopts = "--buildtype=release --default-library=both " | |
| fix_python_shebang_for = ['bin/*'] | |
| sanity_check_paths = { | |
| 'files': ['lib/libglib-%(version_major)s.0.a', 'lib/libglib-%(version_major)s.0.so'], | |
| 'dirs': ['bin', 'include'], | |
| } | |
| moduleclass = 'vis' | |
| == 2021-09-19 21:57:41,662 filetools.py:1783 INFO Creating directory /tmp/eb-_npsx0wt/reprod_20210919215741_3386416 (parents: True, set_gid: False, sticky: False) | |
| == 2021-09-19 21:57:41,662 easyblock.py:3922 INFO Dumped easyconfig instance to /tmp/eb-_npsx0wt/reprod_20210919215741_3386416/GLib-2.69.1-GCCcore-11.2.0.eb | |
| == 2021-09-19 21:57:41,662 filetools.py:1783 INFO Creating directory /tmp/eb-_npsx0wt/reprod_20210919215741_3386416/easyblocks (parents: True, set_gid: False, sticky: False) | |
| == 2021-09-19 21:57:41,663 filetools.py:2294 INFO /mnt/ds918plus/eb/nuc-fedora32/software/EasyBuild/20210825-dev/lib/python3.9/site-packages/easybuild/easyblocks/generic/mesonninja.py copied to /tmp/eb-_npsx0wt/reprod_20210919215741_3386416/easyblocks/mesonninja.py | |
| == 2021-09-19 21:57:41,663 easyblock.py:3902 INFO Dumped easyblock mesonninja.py required for reproduction to /tmp/eb-_npsx0wt/reprod_20210919215741_3386416/easyblocks | |
| == 2021-09-19 21:57:41,664 easyblock.py:1786 INFO Number of iterations to perform for central part of installation procedure: 1 | |
| == 2021-09-19 21:57:41,664 build_log.py:265 INFO building and installing GLib/2.69.1-GCCcore-11.2.0... | |
| == 2021-09-19 21:57:41,664 config.py:618 DEBUG software install path as specified by 'installpath' and 'subdir_software': /mnt/ds918plus/eb/nuc-fedora32/software | |
| == 2021-09-19 21:57:41,664 filetools.py:1876 INFO Lock /mnt/ds918plus/eb/nuc-fedora32/software/.locks/_mnt_ds918plus_eb_nuc-fedora32_software_GLib_2.69.1-GCCcore-11.2.0.lock does not exist | |
| == 2021-09-19 21:57:41,664 config.py:618 DEBUG software install path as specified by 'installpath' and 'subdir_software': /mnt/ds918plus/eb/nuc-fedora32/software | |
| == 2021-09-19 21:57:41,664 filetools.py:1817 INFO Creating lock at /mnt/ds918plus/eb/nuc-fedora32/software/.locks/_mnt_ds918plus_eb_nuc-fedora32_software_GLib_2.69.1-GCCcore-11.2.0.lock... | |
| == 2021-09-19 21:57:41,664 filetools.py:1783 INFO Creating directory /mnt/ds918plus/eb/nuc-fedora32/software/.locks/_mnt_ds918plus_eb_nuc-fedora32_software_GLib_2.69.1-GCCcore-11.2.0.lock (parents: True, set_gid: False, sticky: False) | |
| == 2021-09-19 21:57:41,665 filetools.py:1826 INFO Lock created: /mnt/ds918plus/eb/nuc-fedora32/software/.locks/_mnt_ds918plus_eb_nuc-fedora32_software_GLib_2.69.1-GCCcore-11.2.0.lock | |
| == 2021-09-19 21:57:41,665 easyblock.py:3416 DEBUG Not skipping fetch step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
| == 2021-09-19 21:57:41,665 build_log.py:265 INFO fetching files... | |
| == 2021-09-19 21:57:41,665 easyblock.py:3425 INFO Starting fetch step | |
| == 2021-09-19 21:57:41,665 easyconfig.py:1661 INFO Generating template values... | |
| == 2021-09-19 21:57:41,665 templates.py:189 DEBUG config: GLib EasyConfig @ /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb | |
| == 2021-09-19 21:57:41,665 templates.py:216 DEBUG version found in easyconfig is 2.69.1 | |
| == 2021-09-19 21:57:41,665 systemtools.py:1061 DEBUG Version is already a string ('3.9.6'), OK | |
| == 2021-09-19 21:57:41,665 templates.py:318 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2021-09-19 21:57:41,665 templates.py:318 DEBUG name: github_account, config: %(namelower)s | |
| == 2021-09-19 21:57:41,665 templates.py:318 DEBUG name: name, config: GLib | |
| == 2021-09-19 21:57:41,665 templates.py:318 DEBUG name: parallel, config: None | |
| == 2021-09-19 21:57:41,665 templates.py:318 DEBUG name: version, config: 2.69.1 | |
| == 2021-09-19 21:57:41,665 templates.py:318 DEBUG name: versionsuffix, config: | |
| == 2021-09-19 21:57:41,665 templates.py:318 DEBUG name: versionprefix, config: | |
| == 2021-09-19 21:57:41,666 easyconfig.py:1680 INFO Template values: arch='x86_64', bitbucket_account='glib', builddir='/mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0', github_account='glib', installdir='/mnt/ds918plus/eb/nuc-fedora32/software/GLib/2.69.1-GCCcore-11.2.0', module_name='GLib/2.69.1-GCCcore-11.2.0', name='GLib', nameletter='G', nameletterlower='g', namelower='glib', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', toolchain_name='GCCcore', toolchain_version='11.2.0', version='2.69.1', version_major='2', version_major_minor='2.69', version_minor='69', versionprefix='', versionsuffix='' | |
| == 2021-09-19 21:57:41,666 easyblock.py:3433 INFO Running method fetch_step part of step fetch | |
| == 2021-09-19 21:57:41,666 easyblock.py:1907 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
| == 2021-09-19 21:57:41,666 tools.py:271 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /mnt/ds918plus/eb/nuc-fedora32/software/EasyBuild/20210825-dev/bin/eb | |
| == 2021-09-19 21:57:41,666 tools.py:285 INFO Also considering installation prefix /mnt/ds918plus/eb/nuc-fedora32/software/EasyBuild/20210825-dev (determined via path to 'eb' script)... | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /home/adam/src/easybuild/local/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /mnt/ds918plus/eb/nuc-fedora32/software/EasyBuild/20210825-dev/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-_npsx0wt/files_pr14017/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /tmp/eb-_npsx0wt/fake_vsc_35dlkgaj/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.9/site-packages/git/ext/gitdb/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /mnt/ds918plus/eb/nuc-fedora32/software/EasyBuild/20210825-dev/lib/python3.9/site-packages/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python39.zip/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/lib-dynload/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /home/adam/.local/lib/python3.9/site-packages/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /usr/lib64/python3.9/site-packages/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.9/site-packages/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /usr/lib/python3.9/site-packages/gitdb/ext/smmap/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,666 tools.py:300 DEBUG Checking for easybuild/easyconfigs at /mnt/ds918plus/eb/nuc-fedora32/software/EasyBuild/20210825-dev/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,667 tools.py:304 DEBUG Added /mnt/ds918plus/eb/nuc-fedora32/software/EasyBuild/20210825-dev/easybuild/easyconfigs to list of paths for easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,682 easyblock.py:761 INFO Found file glib-2.69.1.tar.xz at /mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz | |
| == 2021-09-19 21:57:41,683 easyblock.py:389 DEBUG File /mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz found for source glib-2.69.1.tar.xz | |
| == 2021-09-19 21:57:41,683 easyblock.py:432 INFO Added sources: [{'name': 'glib-2.69.1.tar.xz', 'path': '/mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz', 'cmd': None, 'checksum': 'f92f34057a091fc8638d91f10cece842cb8618e9a1090b0ddb19cc15a21bf39c', 'finalpath': '/mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0'}] | |
| == 2021-09-19 21:57:41,683 easyblock.py:1948 INFO no patches provided | |
| == 2021-09-19 21:57:41,683 filetools.py:1179 DEBUG Using blocksize 16777216 for calculating the checksum | |
| == 2021-09-19 21:57:41,790 easyblock.py:1958 INFO md5 checksum for /mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz: 568d07cb33f506d55efab494f9b0fa34 | |
| == 2021-09-19 21:57:41,790 filetools.py:1179 DEBUG Using blocksize 16777216 for calculating the checksum | |
| == 2021-09-19 21:57:41,808 easyblock.py:1958 INFO sha256 checksum for /mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz: f92f34057a091fc8638d91f10cece842cb8618e9a1090b0ddb19cc15a21bf39c | |
| == 2021-09-19 21:57:41,808 easyconfig.py:2599 DEBUG Determining full module name for GLib EasyConfig @ /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb (force_visible: False) | |
| == 2021-09-19 21:57:41,808 easyconfig.py:2576 DEBUG No alternative software name specified to determine module name with | |
| == 2021-09-19 21:57:41,808 utilities.py:102 DEBUG Module name GLib/2.69.1-GCCcore-11.2.0 validated | |
| == 2021-09-19 21:57:41,808 easyconfig.py:2607 DEBUG Obtained valid full module name GLib/2.69.1-GCCcore-11.2.0 | |
| == 2021-09-19 21:57:41,808 config.py:618 DEBUG modules install path as specified by 'installpath' and 'subdir_modules': /mnt/ds918plus/eb/nuc-fedora32/modules | |
| == 2021-09-19 21:57:41,808 easyblock.py:1993 INFO Checking dirs that need to be created: ['/mnt/ds918plus/eb/nuc-fedora32/software/GLib/2.69.1-GCCcore-11.2.0', '/mnt/ds918plus/eb/nuc-fedora32/modules/all/GLib', '/mnt/ds918plus/eb/nuc-fedora32/modules/vis/GLib'] | |
| == 2021-09-19 21:57:41,808 filetools.py:1802 DEBUG Not creating existing path /mnt/ds918plus/eb/nuc-fedora32/software/GLib/2.69.1-GCCcore-11.2.0 | |
| == 2021-09-19 21:57:41,808 filetools.py:1802 DEBUG Not creating existing path /mnt/ds918plus/eb/nuc-fedora32/modules/all/GLib | |
| == 2021-09-19 21:57:41,809 filetools.py:1802 DEBUG Not creating existing path /mnt/ds918plus/eb/nuc-fedora32/modules/vis/GLib | |
| == 2021-09-19 21:57:41,809 build_log.py:265 INFO ... (took < 1 sec) | |
| == 2021-09-19 21:57:41,809 easyblock.py:3416 DEBUG Not skipping ready step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
| == 2021-09-19 21:57:41,809 build_log.py:265 INFO creating build dir, resetting environment... | |
| == 2021-09-19 21:57:41,809 easyblock.py:3425 INFO Starting ready step | |
| == 2021-09-19 21:57:41,809 easyconfig.py:1661 INFO Generating template values... | |
| == 2021-09-19 21:57:41,809 templates.py:189 DEBUG config: GLib EasyConfig @ /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb | |
| == 2021-09-19 21:57:41,809 templates.py:216 DEBUG version found in easyconfig is 2.69.1 | |
| == 2021-09-19 21:57:41,810 systemtools.py:1061 DEBUG Version is already a string ('3.9.6'), OK | |
| == 2021-09-19 21:57:41,810 templates.py:318 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2021-09-19 21:57:41,810 templates.py:318 DEBUG name: github_account, config: %(namelower)s | |
| == 2021-09-19 21:57:41,810 templates.py:318 DEBUG name: name, config: GLib | |
| == 2021-09-19 21:57:41,810 templates.py:318 DEBUG name: parallel, config: None | |
| == 2021-09-19 21:57:41,810 templates.py:318 DEBUG name: version, config: 2.69.1 | |
| == 2021-09-19 21:57:41,810 templates.py:318 DEBUG name: versionsuffix, config: | |
| == 2021-09-19 21:57:41,810 templates.py:318 DEBUG name: versionprefix, config: | |
| == 2021-09-19 21:57:41,810 easyconfig.py:1680 INFO Template values: arch='x86_64', bitbucket_account='glib', builddir='/mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0', github_account='glib', installdir='/mnt/ds918plus/eb/nuc-fedora32/software/GLib/2.69.1-GCCcore-11.2.0', module_name='GLib/2.69.1-GCCcore-11.2.0', name='GLib', nameletter='G', nameletterlower='g', namelower='glib', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', toolchain_name='GCCcore', toolchain_version='11.2.0', version='2.69.1', version_major='2', version_major_minor='2.69', version_minor='69', versionprefix='', versionsuffix='' | |
| == 2021-09-19 21:57:41,810 easyblock.py:3433 INFO Running method check_readiness_step part of step ready | |
| == 2021-09-19 21:57:41,810 easyblock.py:1802 DEBUG Desired parallelism specified via 'parallel' build option: None | |
| == 2021-09-19 21:57:41,814 systemtools.py:184 DEBUG sched_getaffinity for pid 3386416 successful | |
| == 2021-09-19 21:57:41,814 run.py:85 DEBUG Using cached value for command 'ulimit -u': ('127753\n', 0) | |
| == 2021-09-19 21:57:41,815 easyblock.py:1805 INFO Setting parallelism: 8 | |
| == 2021-09-19 21:57:41,815 modules.py:804 DEBUG Current MODULEPATH: /mnt/ds918plus/eb/nuc-fedora32/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core | |
| == 2021-09-19 21:57:41,815 modules.py:818 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python --terse list' from /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs | |
| == 2021-09-19 21:57:41,840 modules.py:825 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python --terse list': stdout: import os | |
| os.environ["MODULEPATH"] = "/mnt/ds918plus/eb/nuc-fedora32/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "b2R1bGVzL2FsbCIsIi9ldGMvbW9kdWxlZmlsZXMiLCIvdXNyL3NoYXJlL21vZHVsZWZpbGVzIiwiL3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eCIsIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZSIsIi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL2V0Yy9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvTGludXg6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9Db3JlOi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0="; | |
| os.environ["_ModuleTable_Sz_"] = "2"; | |
| _mlstatus = True | |
| ; stderr: EasyBuild/20210825-dev | |
| == 2021-09-19 21:57:41,841 modules.py:1366 DEBUG Output found in stdout, seems like '/usr/share/lmod/lmod/libexec/lmod python --terse list' ran fine | |
| == 2021-09-19 21:57:41,841 easyblock.py:1856 WARNING Loaded modules detected: ['EasyBuild/20210825-dev'] | |
| == 2021-09-19 21:57:41,841 easyblock.py:3433 INFO Running method make_builddir part of step ready | |
| == 2021-09-19 21:57:41,841 easyblock.py:947 DEBUG Creating the build directory /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0 (cleanup: True) | |
| == 2021-09-19 21:57:41,843 easyblock.py:1022 INFO Found old directory /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0 | |
| == 2021-09-19 21:57:42,640 filetools.py:359 INFO Path /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0 successfully removed. | |
| == 2021-09-19 21:57:42,640 easyblock.py:1030 INFO Removed old directory /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0 | |
| == 2021-09-19 21:57:42,641 filetools.py:1783 INFO Creating directory /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0 (parents: True, set_gid: False, sticky: False) | |
| == 2021-09-19 21:57:42,641 easyblock.py:3433 INFO Running method reset_env part of step ready | |
| == 2021-09-19 21:57:42,641 easyblock.py:3433 INFO Running method handle_iterate_opts part of step ready | |
| == 2021-09-19 21:57:42,641 easyconfig.py:1661 INFO Generating template values... | |
| == 2021-09-19 21:57:42,641 templates.py:189 DEBUG config: GLib EasyConfig @ /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb | |
| == 2021-09-19 21:57:42,642 templates.py:216 DEBUG version found in easyconfig is 2.69.1 | |
| == 2021-09-19 21:57:42,642 systemtools.py:1061 DEBUG Version is already a string ('3.9.6'), OK | |
| == 2021-09-19 21:57:42,642 templates.py:318 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2021-09-19 21:57:42,642 templates.py:318 DEBUG name: github_account, config: %(namelower)s | |
| == 2021-09-19 21:57:42,642 templates.py:318 DEBUG name: name, config: GLib | |
| == 2021-09-19 21:57:42,642 templates.py:318 DEBUG name: parallel, config: 8 | |
| == 2021-09-19 21:57:42,642 templates.py:318 DEBUG name: version, config: 2.69.1 | |
| == 2021-09-19 21:57:42,642 templates.py:318 DEBUG name: versionsuffix, config: | |
| == 2021-09-19 21:57:42,642 templates.py:318 DEBUG name: versionprefix, config: | |
| == 2021-09-19 21:57:42,642 easyconfig.py:1680 INFO Template values: arch='x86_64', bitbucket_account='glib', builddir='/mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0', github_account='glib', installdir='/mnt/ds918plus/eb/nuc-fedora32/software/GLib/2.69.1-GCCcore-11.2.0', module_name='GLib/2.69.1-GCCcore-11.2.0', name='GLib', nameletter='G', nameletterlower='g', namelower='glib', parallel='8', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', toolchain_name='GCCcore', toolchain_version='11.2.0', version='2.69.1', version_major='2', version_major_minor='2.69', version_minor='69', versionprefix='', versionsuffix='' | |
| == 2021-09-19 21:57:42,642 build_log.py:265 INFO ... (took < 1 sec) | |
| == 2021-09-19 21:57:42,642 easyblock.py:3416 DEBUG Not skipping source step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
| == 2021-09-19 21:57:42,642 build_log.py:265 INFO unpacking... | |
| == 2021-09-19 21:57:42,642 easyblock.py:3425 INFO Starting source step | |
| == 2021-09-19 21:57:42,642 easyconfig.py:1661 INFO Generating template values... | |
| == 2021-09-19 21:57:42,642 templates.py:189 DEBUG config: GLib EasyConfig @ /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb | |
| == 2021-09-19 21:57:42,642 templates.py:216 DEBUG version found in easyconfig is 2.69.1 | |
| == 2021-09-19 21:57:42,642 systemtools.py:1061 DEBUG Version is already a string ('3.9.6'), OK | |
| == 2021-09-19 21:57:42,643 templates.py:318 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2021-09-19 21:57:42,643 templates.py:318 DEBUG name: github_account, config: %(namelower)s | |
| == 2021-09-19 21:57:42,643 templates.py:318 DEBUG name: name, config: GLib | |
| == 2021-09-19 21:57:42,643 templates.py:318 DEBUG name: parallel, config: 8 | |
| == 2021-09-19 21:57:42,643 templates.py:318 DEBUG name: version, config: 2.69.1 | |
| == 2021-09-19 21:57:42,643 templates.py:318 DEBUG name: versionsuffix, config: | |
| == 2021-09-19 21:57:42,643 templates.py:318 DEBUG name: versionprefix, config: | |
| == 2021-09-19 21:57:42,643 easyconfig.py:1680 INFO Template values: arch='x86_64', bitbucket_account='glib', builddir='/mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0', github_account='glib', installdir='/mnt/ds918plus/eb/nuc-fedora32/software/GLib/2.69.1-GCCcore-11.2.0', module_name='GLib/2.69.1-GCCcore-11.2.0', name='GLib', nameletter='G', nameletterlower='g', namelower='glib', parallel='8', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', toolchain_name='GCCcore', toolchain_version='11.2.0', version='2.69.1', version_major='2', version_major_minor='2.69', version_minor='69', versionprefix='', versionsuffix='' | |
| == 2021-09-19 21:57:42,643 easyblock.py:3433 INFO Running method checksum_step part of step source | |
| == 2021-09-19 21:57:42,643 filetools.py:1179 DEBUG Using blocksize 16777216 for calculating the checksum | |
| == 2021-09-19 21:57:42,654 filetools.py:1252 DEBUG Computed sha256 checksum for /mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz: f92f34057a091fc8638d91f10cece842cb8618e9a1090b0ddb19cc15a21bf39c (correct checksum: f92f34057a091fc8638d91f10cece842cb8618e9a1090b0ddb19cc15a21bf39c) | |
| == 2021-09-19 21:57:42,654 easyblock.py:2009 INFO Checksum verification for /mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz using f92f34057a091fc8638d91f10cece842cb8618e9a1090b0ddb19cc15a21bf39c passed. | |
| == 2021-09-19 21:57:42,654 easyblock.py:3433 INFO Running method extract_step part of step source | |
| == 2021-09-19 21:57:42,654 easyblock.py:2101 INFO Unpacking source glib-2.69.1.tar.xz | |
| == 2021-09-19 21:57:42,655 filetools.py:1802 DEBUG Not creating existing path /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0 | |
| == 2021-09-19 21:57:42,655 filetools.py:435 DEBUG Unpacking /mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz in directory /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0 | |
| == 2021-09-19 21:57:42,655 run.py:214 DEBUG run_cmd: running cmd unset TAPE; unxz /mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz --stdout | tar x (in /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0) | |
| == 2021-09-19 21:57:42,655 run.py:233 INFO running cmd: unset TAPE; unxz /mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz --stdout | tar x | |
| == 2021-09-19 21:57:45,075 run.py:584 DEBUG cmd "unset TAPE; unxz /mnt/ds918plus/eb/common/sources/g/GLib/glib-2.69.1.tar.xz --stdout | tar x" exited with exit code 0 and output: | |
| == 2021-09-19 21:57:45,075 run.py:618 DEBUG Using default regular expression: (?<![(,-]|\w)(?:error|segmentation fault|failed)(?![(,-]|\.?\w) | |
| == 2021-09-19 21:57:45,077 filetools.py:1306 DEBUG Last dir list ['AUTHORS', 'CONTRIBUTING.md', 'COPYING', 'HACKING', 'INSTALL.in', 'NEWS', 'NEWS.pre-1-3', 'README', 'README.md', 'README.rationale', 'README.win32', 'README.win32.md', 'SECURITY.md', 'check-abis.sh', 'clang-format-diff.py', 'docs', 'fuzzing', 'gio', 'glib', 'glib-gettextize.in', 'glib.doap', 'glib.supp', 'gmodule', 'gobject', 'gthread', 'm4macros', 'meson.build', 'meson_options.txt', 'msvc_recommended_pragmas.h', 'po', 'subprojects', 'template-tap.test.in', 'template.test.in', 'tests'] | |
| == 2021-09-19 21:57:45,077 filetools.py:1307 DEBUG Possible new dir /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0/glib-2.69.1 found | |
| == 2021-09-19 21:57:45,077 build_log.py:265 INFO ... (took 2 secs) | |
| == 2021-09-19 21:57:45,077 easyblock.py:3416 DEBUG Not skipping patch step (skippable: True, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
| == 2021-09-19 21:57:45,077 build_log.py:265 INFO patching... | |
| == 2021-09-19 21:57:45,077 easyblock.py:3425 INFO Starting patch step | |
| == 2021-09-19 21:57:45,077 easyconfig.py:1661 INFO Generating template values... | |
| == 2021-09-19 21:57:45,077 templates.py:189 DEBUG config: GLib EasyConfig @ /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb | |
| == 2021-09-19 21:57:45,077 templates.py:216 DEBUG version found in easyconfig is 2.69.1 | |
| == 2021-09-19 21:57:45,077 systemtools.py:1061 DEBUG Version is already a string ('3.9.6'), OK | |
| == 2021-09-19 21:57:45,077 templates.py:318 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: github_account, config: %(namelower)s | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: name, config: GLib | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: parallel, config: 8 | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: version, config: 2.69.1 | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: versionsuffix, config: | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: versionprefix, config: | |
| == 2021-09-19 21:57:45,078 easyconfig.py:1680 INFO Template values: arch='x86_64', bitbucket_account='glib', builddir='/mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0', github_account='glib', installdir='/mnt/ds918plus/eb/nuc-fedora32/software/GLib/2.69.1-GCCcore-11.2.0', module_name='GLib/2.69.1-GCCcore-11.2.0', name='GLib', nameletter='G', nameletterlower='g', namelower='glib', parallel='8', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', toolchain_name='GCCcore', toolchain_version='11.2.0', version='2.69.1', version_major='2', version_major_minor='2.69', version_minor='69', versionprefix='', versionsuffix='' | |
| == 2021-09-19 21:57:45,078 easyblock.py:3433 INFO Running method patch_step part of step patch | |
| == 2021-09-19 21:57:45,078 build_log.py:265 INFO ... (took < 1 sec) | |
| == 2021-09-19 21:57:45,078 easyblock.py:3416 DEBUG Not skipping prepare step (skippable: False, skip: None, skipsteps: [], module_only: False, force: False, sanity_check_only: False, skip_extensions: False, skip_test_step: False) | |
| == 2021-09-19 21:57:45,078 build_log.py:265 INFO preparing... | |
| == 2021-09-19 21:57:45,078 easyblock.py:3425 INFO Starting prepare step | |
| == 2021-09-19 21:57:45,078 easyconfig.py:1661 INFO Generating template values... | |
| == 2021-09-19 21:57:45,078 templates.py:189 DEBUG config: GLib EasyConfig @ /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb | |
| == 2021-09-19 21:57:45,078 templates.py:216 DEBUG version found in easyconfig is 2.69.1 | |
| == 2021-09-19 21:57:45,078 systemtools.py:1061 DEBUG Version is already a string ('3.9.6'), OK | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: bitbucket_account, config: %(namelower)s | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: github_account, config: %(namelower)s | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: name, config: GLib | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: parallel, config: 8 | |
| == 2021-09-19 21:57:45,078 templates.py:318 DEBUG name: version, config: 2.69.1 | |
| == 2021-09-19 21:57:45,079 templates.py:318 DEBUG name: versionsuffix, config: | |
| == 2021-09-19 21:57:45,079 templates.py:318 DEBUG name: versionprefix, config: | |
| == 2021-09-19 21:57:45,079 easyconfig.py:1680 INFO Template values: arch='x86_64', bitbucket_account='glib', builddir='/mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0', github_account='glib', installdir='/mnt/ds918plus/eb/nuc-fedora32/software/GLib/2.69.1-GCCcore-11.2.0', module_name='GLib/2.69.1-GCCcore-11.2.0', name='GLib', nameletter='G', nameletterlower='g', namelower='glib', parallel='8', pymajver='3', pyminver='9', pyshortver='3.9', pyver='3.9.6', toolchain_name='GCCcore', toolchain_version='11.2.0', version='2.69.1', version_major='2', version_major_minor='2.69', version_minor='69', versionprefix='', versionsuffix='' | |
| == 2021-09-19 21:57:45,079 easyblock.py:3433 INFO Running method prepare_step part of step prepare | |
| == 2021-09-19 21:57:45,079 easyconfig.py:2667 DEBUG Determining initial module paths for GLib EasyConfig @ /home/adam/src/github/easybuild-easyconfigs/easybuild/easyconfigs/g/GLib/GLib-2.69.1-GCCcore-11.2.0.eb | |
| == 2021-09-19 21:57:45,079 easyconfig.py:2669 DEBUG Obtained initial module paths: [] | |
| == 2021-09-19 21:57:45,079 easyconfig.py:1106 DEBUG Dependencies BEFORE filtering: [{'full_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'short_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'name': 'Python', 'version': '3.9.6', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'Meson/0.58.2-GCCcore-11.2.0', 'short_mod_name': 'Meson/0.58.2-GCCcore-11.2.0', 'name': 'Meson', 'version': '0.58.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'Ninja/1.10.2-GCCcore-11.2.0', 'short_mod_name': 'Ninja/1.10.2-GCCcore-11.2.0', 'name': 'Ninja', 'version': '1.10.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'binutils/2.37-GCCcore-11.2.0', 'short_mod_name': 'binutils/2.37-GCCcore-11.2.0', 'name': 'binutils', 'version': '2.37', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'pkg-config/0.29.2-GCCcore-11.2.0', 'short_mod_name': 'pkg-config/0.29.2-GCCcore-11.2.0', 'name': 'pkg-config', 'version': '0.29.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'libffi/3.4.2-GCCcore-11.2.0', 'short_mod_name': 'libffi/3.4.2-GCCcore-11.2.0', 'name': 'libffi', 'version': '3.4.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'gettext/0.21-GCCcore-11.2.0', 'short_mod_name': 'gettext/0.21-GCCcore-11.2.0', 'name': 'gettext', 'version': '0.21', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'libxml2/2.9.10-GCCcore-11.2.0', 'short_mod_name': 'libxml2/2.9.10-GCCcore-11.2.0', 'name': 'libxml2', 'version': '2.9.10', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'PCRE/8.45-GCCcore-11.2.0', 'short_mod_name': 'PCRE/8.45-GCCcore-11.2.0', 'name': 'PCRE', 'version': '8.45', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'util-linux/2.37-GCCcore-11.2.0', 'short_mod_name': 'util-linux/2.37-GCCcore-11.2.0', 'name': 'util-linux', 'version': '2.37', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}] | |
| == 2021-09-19 21:57:45,079 easyconfig.py:1109 DEBUG Dependencies AFTER filtering: [{'full_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'short_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'name': 'Python', 'version': '3.9.6', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'Meson/0.58.2-GCCcore-11.2.0', 'short_mod_name': 'Meson/0.58.2-GCCcore-11.2.0', 'name': 'Meson', 'version': '0.58.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'Ninja/1.10.2-GCCcore-11.2.0', 'short_mod_name': 'Ninja/1.10.2-GCCcore-11.2.0', 'name': 'Ninja', 'version': '1.10.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'binutils/2.37-GCCcore-11.2.0', 'short_mod_name': 'binutils/2.37-GCCcore-11.2.0', 'name': 'binutils', 'version': '2.37', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'pkg-config/0.29.2-GCCcore-11.2.0', 'short_mod_name': 'pkg-config/0.29.2-GCCcore-11.2.0', 'name': 'pkg-config', 'version': '0.29.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'libffi/3.4.2-GCCcore-11.2.0', 'short_mod_name': 'libffi/3.4.2-GCCcore-11.2.0', 'name': 'libffi', 'version': '3.4.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'gettext/0.21-GCCcore-11.2.0', 'short_mod_name': 'gettext/0.21-GCCcore-11.2.0', 'name': 'gettext', 'version': '0.21', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'libxml2/2.9.10-GCCcore-11.2.0', 'short_mod_name': 'libxml2/2.9.10-GCCcore-11.2.0', 'name': 'libxml2', 'version': '2.9.10', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'PCRE/8.45-GCCcore-11.2.0', 'short_mod_name': 'PCRE/8.45-GCCcore-11.2.0', 'name': 'PCRE', 'version': '8.45', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'util-linux/2.37-GCCcore-11.2.0', 'short_mod_name': 'util-linux/2.37-GCCcore-11.2.0', 'name': 'util-linux', 'version': '2.37', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}] | |
| == 2021-09-19 21:57:45,079 toolchain.py:521 DEBUG _check_dependencies: adding toolchain dependencies [{'full_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'short_mod_name': 'Python/3.9.6-GCCcore-11.2.0', 'name': 'Python', 'version': '3.9.6', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'Meson/0.58.2-GCCcore-11.2.0', 'short_mod_name': 'Meson/0.58.2-GCCcore-11.2.0', 'name': 'Meson', 'version': '0.58.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'Ninja/1.10.2-GCCcore-11.2.0', 'short_mod_name': 'Ninja/1.10.2-GCCcore-11.2.0', 'name': 'Ninja', 'version': '1.10.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'binutils/2.37-GCCcore-11.2.0', 'short_mod_name': 'binutils/2.37-GCCcore-11.2.0', 'name': 'binutils', 'version': '2.37', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'pkg-config/0.29.2-GCCcore-11.2.0', 'short_mod_name': 'pkg-config/0.29.2-GCCcore-11.2.0', 'name': 'pkg-config', 'version': '0.29.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': True, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'libffi/3.4.2-GCCcore-11.2.0', 'short_mod_name': 'libffi/3.4.2-GCCcore-11.2.0', 'name': 'libffi', 'version': '3.4.2', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'gettext/0.21-GCCcore-11.2.0', 'short_mod_name': 'gettext/0.21-GCCcore-11.2.0', 'name': 'gettext', 'version': '0.21', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'libxml2/2.9.10-GCCcore-11.2.0', 'short_mod_name': 'libxml2/2.9.10-GCCcore-11.2.0', 'name': 'libxml2', 'version': '2.9.10', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'PCRE/8.45-GCCcore-11.2.0', 'short_mod_name': 'PCRE/8.45-GCCcore-11.2.0', 'name': 'PCRE', 'version': '8.45', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}, {'full_mod_name': 'util-linux/2.37-GCCcore-11.2.0', 'short_mod_name': 'util-linux/2.37-GCCcore-11.2.0', 'name': 'util-linux', 'version': '2.37', 'versionsuffix': '', 'toolchain': {'name': 'GCCcore', 'version': '11.2.0'}, 'toolchain_inherited': False, 'system': False, 'hidden': False, 'build_only': False, 'external_module': False, 'external_module_metadata': {}}] | |
| == 2021-09-19 21:57:45,079 toolchain.py:531 DEBUG _check_dependencies: MODULEPATH: /mnt/ds918plus/eb/nuc-fedora32/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core | |
| == 2021-09-19 21:57:45,080 modules.py:482 DEBUG Found cached result for 'module avail' with key '('MODULEPATH=/mnt/ds918plus/eb/nuc-fedora32/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core', 'lmod', '--show-hidden')': ['ABRA2/2.23-GCC-9.3.0', 'AOCC/3.0.0-GCCcore-10.2.0', 'AOCC/3.0.0-GCCcore-10.3.0', 'AOCC/3.1.0-GCCcore-10.2.0', 'AOCC/3.1.0-GCCcore-10.3.0', 'APR-util/1.6.1-GCCcore-10.3.0', 'APR/1.7.0-GCCcore-10.3.0', 'ASE/3.21.1-foss-2020b', 'ASE/3.22.0-foss-2021a', 'ATK/2.34.1-GCCcore-8.3.0', 'ATK/2.36.0-GCCcore-10.2.0', 'ATK/2.36.0-GCCcore-9.3.0', 'Arb/2.19.0-GCC-10.3.0', 'Archive-Zip/1.68-GCCcore-10.2.0', 'Archive-Zip/1.68-GCCcore-10.3.0', 'Armadillo/10.5.3-foss-2020b', 'Arriba/2.1.0-GCC-10.3.0', 'AutoGeneS/1.0.4-foss-2020b', 'Autoconf/2.69-GCCcore-10.2.0', 'Autoconf/2.69-GCCcore-8.2.0', 'Autoconf/2.69-GCCcore-8.3.0', 'Autoconf/2.69-GCCcore-9.3.0', 'Autoconf/2.71-GCCcore-10.3.0', 'Autoconf/2.71-GCCcore-11.2.0', 'Automake/1.16.1-GCCcore-8.2.0', 'Automake/1.16.1-GCCcore-8.3.0', 'Automake/1.16.1-GCCcore-9.3.0', 'Automake/1.16.2-GCCcore-10.2.0', 'Automake/1.16.3-GCCcore-10.3.0', 'Automake/1.16.4-GCCcore-11.2.0', 'Autotools/20180311-GCCcore-8.2.0', 'Autotools/20180311-GCCcore-8.3.0', 'Autotools/20180311-GCCcore-9.3.0', 'Autotools/20200321-GCCcore-10.2.0', 'Autotools/20210128-GCCcore-10.3.0', 'Autotools/20210726-GCCcore-11.2.0', 'BAMSurgeon/1.2-GCC-8.3.0-Python-2.7.16', 'BAli-Phy/3.6.0', 'BCFtools/1.10.2-GCC-8.3.0', 'BCFtools/1.12-GCC-10.2.0', 'BCFtools/1.12-GCC-9.3.0', 'BEDTools/2.29.2-GCC-8.3.0', 'BEDTools/2.29.2-GCC-9.3.0', 'BEDTools/2.30.0-GCC-10.2.0', 'BEDTools/2.30.0-GCC-10.3.0', 'BLAST+/2.10.1-gompi-2020a', 'BLAST+/2.11.0-gompi-2019b', 'BLAST+/2.11.0-gompi-2020a', 'BLAST+/2.11.0-gompi-2020b', 'BLAST+/2.9.0-gompi-2019a', 'BLAST+/2.9.0-gompi-2019b', 'BLAST/2.10.1-Linux_x86_64', 'BLAT/3.5-GCC-8.2.0-2.31.1', 'BLAT/3.5-GCC-8.3.0', 'BLAT/3.5-GCC-9.3.0', 'BOLT-LMM/2.3.4', 'BOLT-LMM/2.3.5', 'BUStools/0.40.0-GCCcore-9.3.0', 'BWA/0.7.17-GCC-10.2.0', 'BWA/0.7.17-GCC-8.3.0', 'BWA/0.7.17-GCC-9.3.0', 'BamTools/2.5.1-GCC-10.2.0', 'BamTools/2.5.1-GCC-8.3.0', 'BamTools/2.5.1-GCC-9.3.0', 'BamTools/2.5.2-GCC-10.3.0', 'Bazel/2.0.0-GCCcore-8.3.0', 'Bazel/3.4.1-GCCcore-8.3.0', 'Bazel/3.6.0-GCCcore-9.3.0', 'Bazel/3.7.2-GCCcore-10.2.0', 'Beast/1.10.4-GCC-10.2.0', 'BerkeleyGW/2.1.0-foss-2020b', 'Bio-DB-HTS/3.01-GCC-10.2.0', 'Bio-DB-HTS/3.01-GCC-8.2.0-2.31.1-Perl-5.28.1', 'BioPP/2.4.1-GCC-8.2.0-2.31.1', 'BioPerl/1.7.2-GCCcore-8.2.0-Perl-5.28.1', 'BioPerl/1.7.8-GCCcore-10.2.0', 'BioPerl/1.7.8-GCCcore-10.3.0', 'Biopython/1.75-foss-2019b-Python-2.7.16', 'Biopython/1.75-foss-2019b-Python-3.7.4', 'Biopython/1.76-foss-2020b-Python-2.7.18', 'Biopython/1.78-foss-2020b', 'Biopython/1.79-foss-2021a', 'Bison/3.0.4', 'Bison/3.0.5', 'Bison/3.0.5-GCCcore-8.2.0', 'Bison/3.3.2', 'Bison/3.3.2-GCCcore-8.3.0', 'Bison/3.3.2-GCCcore-8.4.0', 'Bison/3.5.3', 'Bison/3.5.3-GCCcore-9.3.0', 'Bison/3.7.1', 'Bison/3.7.1-GCCcore-10.2.0', 'Bison/3.7.6', 'Bison/3.7.6-GCCcore-10.3.0', 'Bison/3.7.6-GCCcore-11.1.0', 'Bison/3.7.6-GCCcore-11.2.0', 'Blosc/1.21.0-GCCcore-10.2.0', 'Blosc/1.21.0-GCCcore-10.3.0', 'Boost.Python/1.71.0-gompi-2019b', 'Boost.Python/1.72.0-gompi-2020a', 'Boost.Python/1.76.0-GCC-10.3.0', 'Boost/1.70.0-gompi-2019a', 'Boost/1.71.0-gompi-2019b', 'Boost/1.72.0-GCC-9.3.0', 'Boost/1.72.0-gompi-2020a', 'Boost/1.74.0-GCC-10.2.0', 'Boost/1.76.0-GCC-10.3.0', 'Bowtie/1.2.3-GCC-8.3.0', 'Bowtie/1.2.3-GCC-9.3.0', 'Bowtie2/2.3.5.1-GCC-8.2.0-2.31.1', 'Bowtie2/2.3.5.1-GCC-8.3.0', 'Bowtie2/2.4.1-GCC-9.3.0', 'Bowtie2/2.4.2-GCC-10.2.0', 'Bowtie2/2.4.2-GCC-9.3.0', 'Bowtie2/2.4.4-GCC-10.3.0', 'Brotli/1.0.9-GCCcore-10.2.0', 'Brotli/1.0.9-GCCcore-10.3.0', 'Brotli/1.0.9-GCCcore-11.2.0', 'CAVIAR/20200820-foss-2020a', 'CD-HIT/4.8.1-GCC-10.2.0', 'CD-HIT/4.8.1-GCC-8.3.0', 'CIRCexplorer2/2.3.8-foss-2020b-Python-2.7.18', 'CIRI-long/1.0.2-foss-2020b', 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'python-igraph/0.9.0-fosscuda-2020b', 'python-igraph/0.9.6-foss-2021a', 'python-isal/0.11.0-GCCcore-10.3.0', 'python-parasail/1.2-foss-2019b-Python-3.7.4', 'qcat/1.1.0-foss-2019b-Python-3.7.4', 'qrupdate/1.1.2-GCCcore-10.2.0', 'rasterio/1.1.7-foss-2020a-Python-3.8.2', 'rclone/1.54.1-amd64', 're2c/1.2.1-GCCcore-8.3.0', 're2c/1.3-GCCcore-9.3.0', 're2c/2.0.3-GCCcore-10.2.0', 're2c/2.2-GCCcore-11.2.0', 'rgdal/1.5-16-foss-2020a-R-4.0.0', 'rgdal/1.5-23-foss-2020b-R-4.0.4', 'rgdal/1.5-23-foss-2021a-R-4.1.0', 'rgeos/0.5-5-foss-2020a-R-4.0.0', 'rgeos/0.5-5-foss-2021a-R-4.1.0', 'rioxarray/0.1.1-foss-2020a-Python-3.8.2', 'rjags/4-10-foss-2020a-R-4.0.0', 'rjags/4-10-foss-2020b-R-4.0.3', 'rjags/4-10-foss-2020b-R-4.0.4', 'rjags/4-10-foss-2020b-R-4.0.5', 'rjags/4-10-foss-2021a-R-4.1.0', 'samclip/0.4.0-GCCcore-10.2.0', 'scGeneFit/1.0.2-foss-2021a', 'scanpy/1.8.1-foss-2020b', 'scanpy/1.8.1-foss-2021a', 'scikit-build/0.10.0-foss-2020a-Python-3.8.2', 'scikit-build/0.11.1-foss-2020b', 'scikit-image/0.18.1-foss-2020b', 'scikit-learn/0.20.4-foss-2020b-Python-2.7.18', 'scikit-learn/0.21.3-foss-2019b-Python-3.7.4', 'scikit-learn/0.23.1-foss-2020a-Python-3.8.2', 'scikit-learn/0.23.2-foss-2020b', 'scikit-learn/0.23.2-fosscuda-2020b', 'scikit-learn/0.24.2-foss-2021a', 'scikit-optimize/0.8.1-foss-2020a-Python-3.8.2', 'scikit-uplift/0.2.0-foss-2020a-Python-3.8.2', 'scipy/1.4.1-foss-2019b-Python-3.7.4', 'segemehl/0.3.4-GCC-10.2.0', 'seqtk/1.3-GCC-10.2.0', 'settarg', 'sf/0.9-5-foss-2020a-R-4.0.0-Python-3.8.2', 'shovill/1.1.0-foss-2020b-Python-2.7.18', 'shrinkwrap/1.1.0-GCCcore-10.2.0', 'slepc4py/3.15.1-foss-2021a', 'smithwaterman/20160702-GCCcore-9.3.0', 'snappy/1.1.7-GCCcore-8.2.0', 'snappy/1.1.7-GCCcore-8.3.0', 'snappy/1.1.8-GCCcore-10.2.0', 'snappy/1.1.8-GCCcore-9.3.0', 'snpEff/5.0-Java-13', 'sonic/20180202-gompi-2020a', 'spatialreg/1.1-8-foss-2021a-R-4.1.0', 'speech_tools/2.5.0-GCCcore-9.3.0', 'spglib-python/1.16.0-foss-2020b', 'spglib-python/1.16.1-foss-2021a', 'spoa/4.0.0-GCC-8.3.0', 'spoa/4.0.7-GCC-10.2.0', 'stars/0.4-3-foss-2020a-R-4.0.0-Python-3.8.2', 'statsmodels/0.11.1-foss-2020a-Python-3.8.2', 'statsmodels/0.12.1-foss-2020b', 'statsmodels/0.12.2-foss-2021a', 'stpipeline/1.7.6-foss-2019b-Python-3.7.4', 'sympy/1.5.1-foss-2019b-Python-3.7.4', 'sympy/1.6.2-foss-2020a-Python-3.8.2', 'sympy/1.7.1-foss-2020b', 'tabixpp/1.1.0-GCC-9.3.0', 'tbb/2019_U4-GCCcore-8.2.0', 'tbb/2019_U9-GCCcore-8.3.0', 'tbb/2020.1-GCCcore-9.3.0', 'tbb/2020.3-GCCcore-10.2.0', 'tbb/2021.2.0-GCCcore-10.3.0', 'tcsh/6.22.02-GCCcore-8.3.0', 'tcsh/6.22.02-GCCcore-9.3.0', 'terastructure/1.0-GCC-8.3.0', 'texinfo/6.7-GCCcore-10.2.0', 'texinfo/6.7-GCCcore-9.3.0', 'time/1.9-GCCcore-10.3.0', 'time/1.9-GCCcore-8.3.0', 'time/1.9-GCCcore-9.3.0', 'tmux/3.2-GCCcore-9.3.0', 'tqdm/4.41.1-GCCcore-8.3.0', 'tqdm/4.47.0-GCCcore-9.3.0', 'tqdm/4.56.2-GCCcore-10.2.0', 'tqdm/4.60.0-GCCcore-9.3.0', 'tqdm/4.61.1-GCCcore-10.3.0', 'tqdm/4.61.2-GCCcore-10.3.0', 'treatSens/3.0-20201002-foss-2020a-R-4.0.0', 'typing-extensions/3.7.4.3-GCCcore-10.2.0', 'utf8proc/2.6.1-GCCcore-10.3.0', 'util-linux/2.33-GCCcore-8.2.0', 'util-linux/2.34-GCCcore-8.3.0', 'util-linux/2.35-GCCcore-9.3.0', 'util-linux/2.36-GCCcore-10.2.0', 'util-linux/2.36-GCCcore-10.3.0', 'util-linux/2.37-GCCcore-11.2.0', 'vcflib/1.0.2-GCC-9.3.0-Python-3.8.2', 'velocyto/0.17.17-foss-2021a', 'vsc-mympirun/5.2.2', 'vt/0.57721-GCC-10.2.0', 'wandb/0.8.30-gcccuda-2019b-Python-3.7.4', 'x264/20190925-GCCcore-8.3.0', 'x264/20191217-GCCcore-9.3.0', 'x264/20201026-GCCcore-10.2.0', 'x265/3.2-GCCcore-8.3.0', 'x265/3.3-GCCcore-10.2.0', 'x265/3.3-GCCcore-9.3.0', 'xarray/0.15.1-foss-2019b-Python-3.7.4', 'xarray/0.16.1-foss-2020a-Python-3.8.2', 'xarray/0.16.2-foss-2020b', 'xorg-macros/1.19.2-GCCcore-10.2.0', 'xorg-macros/1.19.2-GCCcore-8.2.0', 'xorg-macros/1.19.2-GCCcore-8.3.0', 'xorg-macros/1.19.2-GCCcore-9.3.0', 'xorg-macros/1.19.3-GCCcore-10.3.0', 'xorg-macros/1.19.3-GCCcore-11.2.0', 'xprop/1.2.4-GCCcore-8.3.0', 'xprop/1.2.4-GCCcore-9.3.0', 'xprop/1.2.5-GCCcore-10.2.0', 'zlib/1.2.11', 'zlib/1.2.11-GCCcore-10.2.0', 'zlib/1.2.11-GCCcore-10.3.0', 'zlib/1.2.11-GCCcore-11.1.0', 'zlib/1.2.11-GCCcore-11.2.0', 'zlib/1.2.11-GCCcore-8.2.0', 'zlib/1.2.11-GCCcore-8.3.0', 'zlib/1.2.11-GCCcore-8.4.0', 'zlib/1.2.11-GCCcore-9.3.0', 'zstd/1.4.0-GCCcore-8.2.0', 'zstd/1.4.4-GCCcore-9.3.0', 'zstd/1.4.5-GCCcore-10.2.0', 'zstd/1.4.9-GCCcore-10.3.0'] | |
| == 2021-09-19 21:57:45,080 modules.py:618 INFO Checking whether Python/3.9.6-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,081 modules.py:625 INFO Module Python/3.9.6-GCCcore-11.2.0 not found in list of available modules, checking via 'module show'... | |
| == 2021-09-19 21:57:45,081 modules.py:562 DEBUG Checking whether Python/3.9.6-GCCcore-11.2.0 exists based on output of 'module show' | |
| == 2021-09-19 21:57:45,081 modules.py:709 DEBUG Found cached result for 'module show Python/3.9.6-GCCcore-11.2.0' with key '('MODULEPATH=/mnt/ds918plus/eb/nuc-fedora32/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core', 'lmod', 'Python/3.9.6-GCCcore-11.2.0')': | |
| == 2021-09-19 21:57:45,081 modules.py:572 DEBUG Checking line '' to determine whether Python/3.9.6-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,081 modules.py:576 DEBUG Treating line '' as whitespace, so skipping it | |
| == 2021-09-19 21:57:45,081 modules.py:639 INFO Module Python/3.9.6-GCCcore-11.2.0 not found via module avail/show, checking whether it is a wrapper | |
| == 2021-09-19 21:57:45,081 modules.py:646 INFO Result for existence check of Python/3.9.6-GCCcore-11.2.0 module: False | |
| == 2021-09-19 21:57:45,081 modules.py:618 INFO Checking whether Meson/0.58.2-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,081 modules.py:625 INFO Module Meson/0.58.2-GCCcore-11.2.0 not found in list of available modules, checking via 'module show'... | |
| == 2021-09-19 21:57:45,081 modules.py:562 DEBUG Checking whether Meson/0.58.2-GCCcore-11.2.0 exists based on output of 'module show' | |
| == 2021-09-19 21:57:45,081 modules.py:804 DEBUG Current MODULEPATH: /mnt/ds918plus/eb/nuc-fedora32/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core | |
| == 2021-09-19 21:57:45,081 modules.py:818 DEBUG Running module command '/usr/share/lmod/lmod/libexec/lmod python show Meson/0.58.2-GCCcore-11.2.0' from /mnt/ds918plus/eb/nuc-fedora32/build/GLib/2.69.1/GCCcore-11.2.0/glib-2.69.1 | |
| == 2021-09-19 21:57:45,314 modules.py:825 DEBUG Output of module command '/usr/share/lmod/lmod/libexec/lmod python show Meson/0.58.2-GCCcore-11.2.0': stdout: import os | |
| os.environ["MODULEPATH"] = "/mnt/ds918plus/eb/nuc-fedora32/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "b2R1bGVzL2FsbCIsIi9ldGMvbW9kdWxlZmlsZXMiLCIvdXNyL3NoYXJlL21vZHVsZWZpbGVzIiwiL3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eCIsIi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvQ29yZSIsIi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0sWyJzeXN0ZW1CYXNlTVBBVEgiXT0iL2V0Yy9tb2R1bGVmaWxlczovdXNyL3NoYXJlL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXMvTGludXg6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9Db3JlOi91c3Ivc2hhcmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0="; | |
| os.environ["_ModuleTable_Sz_"] = "2"; | |
| _mlstatus = True | |
| ; stderr: | |
| == 2021-09-19 21:57:45,314 modules.py:713 DEBUG Cached result for 'module show Meson/0.58.2-GCCcore-11.2.0' with key '('MODULEPATH=/mnt/ds918plus/eb/nuc-fedora32/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core', 'lmod', 'Meson/0.58.2-GCCcore-11.2.0')': | |
| == 2021-09-19 21:57:45,314 modules.py:572 DEBUG Checking line '' to determine whether Meson/0.58.2-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,314 modules.py:576 DEBUG Treating line '' as whitespace, so skipping it | |
| == 2021-09-19 21:57:45,314 modules.py:639 INFO Module Meson/0.58.2-GCCcore-11.2.0 not found via module avail/show, checking whether it is a wrapper | |
| == 2021-09-19 21:57:45,315 modules.py:646 INFO Result for existence check of Meson/0.58.2-GCCcore-11.2.0 module: False | |
| == 2021-09-19 21:57:45,315 modules.py:618 INFO Checking whether Ninja/1.10.2-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,315 modules.py:625 INFO Module Ninja/1.10.2-GCCcore-11.2.0 not found in list of available modules, checking via 'module show'... | |
| == 2021-09-19 21:57:45,315 modules.py:562 DEBUG Checking whether Ninja/1.10.2-GCCcore-11.2.0 exists based on output of 'module show' | |
| == 2021-09-19 21:57:45,315 modules.py:709 DEBUG Found cached result for 'module show Ninja/1.10.2-GCCcore-11.2.0' with key '('MODULEPATH=/mnt/ds918plus/eb/nuc-fedora32/modules/all:/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core', 'lmod', 'Ninja/1.10.2-GCCcore-11.2.0')': | |
| == 2021-09-19 21:57:45,315 modules.py:572 DEBUG Checking line '' to determine whether Ninja/1.10.2-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,316 modules.py:576 DEBUG Treating line '' as whitespace, so skipping it | |
| == 2021-09-19 21:57:45,316 modules.py:639 INFO Module Ninja/1.10.2-GCCcore-11.2.0 not found via module avail/show, checking whether it is a wrapper | |
| == 2021-09-19 21:57:45,316 modules.py:646 INFO Result for existence check of Ninja/1.10.2-GCCcore-11.2.0 module: False | |
| == 2021-09-19 21:57:45,316 modules.py:618 INFO Checking whether binutils/2.37-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,316 modules.py:623 INFO Module binutils/2.37-GCCcore-11.2.0 exists (found in list of available modules) | |
| == 2021-09-19 21:57:45,316 modules.py:646 INFO Result for existence check of binutils/2.37-GCCcore-11.2.0 module: True | |
| == 2021-09-19 21:57:45,316 modules.py:618 INFO Checking whether pkg-config/0.29.2-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,316 modules.py:623 INFO Module pkg-config/0.29.2-GCCcore-11.2.0 exists (found in list of available modules) | |
| == 2021-09-19 21:57:45,316 modules.py:646 INFO Result for existence check of pkg-config/0.29.2-GCCcore-11.2.0 module: True | |
| == 2021-09-19 21:57:45,316 modules.py:618 INFO Checking whether libffi/3.4.2-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,316 modules.py:623 INFO Module libffi/3.4.2-GCCcore-11.2.0 exists (found in list of available modules) | |
| == 2021-09-19 21:57:45,316 modules.py:646 INFO Result for existence check of libffi/3.4.2-GCCcore-11.2.0 module: True | |
| == 2021-09-19 21:57:45,316 modules.py:618 INFO Checking whether gettext/0.21-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,316 modules.py:623 INFO Module gettext/0.21-GCCcore-11.2.0 exists (found in list of available modules) | |
| == 2021-09-19 21:57:45,316 modules.py:646 INFO Result for existence check of gettext/0.21-GCCcore-11.2.0 module: True | |
| == 2021-09-19 21:57:45,316 modules.py:618 INFO Checking whether libxml2/2.9.10-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,316 modules.py:623 INFO Module libxml2/2.9.10-GCCcore-11.2.0 exists (found in list of available modules) | |
| == 2021-09-19 21:57:45,316 modules.py:646 INFO Result for existence check of libxml2/2.9.10-GCCcore-11.2.0 module: True | |
| == 2021-09-19 21:57:45,316 modules.py:618 INFO Checking whether PCRE/8.45-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,316 modules.py:623 INFO Module PCRE/8.45-GCCcore-11.2.0 exists (found in list of available modules) | |
| == 2021-09-19 21:57:45,316 modules.py:646 INFO Result for existence check of PCRE/8.45-GCCcore-11.2.0 module: True | |
| == 2021-09-19 21:57:45,317 modules.py:618 INFO Checking whether util-linux/2.37-GCCcore-11.2.0 exists... | |
| == 2021-09-19 21:57:45,317 modules.py:623 INFO Module util-linux/2.37-GCCcore-11.2.0 exists (found in list of available modules) | |
| == 2021-09-19 21:57:45,317 modules.py:646 INFO Result for existence check of util-linux/2.37-GCCcore-11.2.0 module: True | |
| == 2021-09-19 21:57:45,318 build_log.py:169 ERROR EasyBuild crashed with an error (at easybuild/base/exceptions.py:124 in __init__): Missing modules for dependencies (use --robot?): Python/3.9.6-GCCcore-11.2.0, Meson/0.58.2-GCCcore-11.2.0, Ninja/1.10.2-GCCcore-11.2.0 (at easybuild/tools/toolchain/toolchain.py:557 in _check_dependencies) | |
| == 2021-09-19 21:57:45,318 build_log.py:265 INFO ... (took < 1 sec) | |
| == 2021-09-19 21:57:45,319 config.py:618 DEBUG software install path as specified by 'installpath' and 'subdir_software': /mnt/ds918plus/eb/nuc-fedora32/software | |
| == 2021-09-19 21:57:45,319 filetools.py:1884 INFO Removing lock /mnt/ds918plus/eb/nuc-fedora32/software/.locks/_mnt_ds918plus_eb_nuc-fedora32_software_GLib_2.69.1-GCCcore-11.2.0.lock... | |
| == 2021-09-19 21:57:45,320 filetools.py:359 INFO Path /mnt/ds918plus/eb/nuc-fedora32/software/.locks/_mnt_ds918plus_eb_nuc-fedora32_software_GLib_2.69.1-GCCcore-11.2.0.lock successfully removed. | |
| == 2021-09-19 21:57:45,320 filetools.py:1888 INFO Lock removed: /mnt/ds918plus/eb/nuc-fedora32/software/.locks/_mnt_ds918plus_eb_nuc-fedora32_software_GLib_2.69.1-GCCcore-11.2.0.lock | |
| == 2021-09-19 21:57:45,320 easyblock.py:3725 WARNING build failed (first 300 chars): Missing modules for dependencies (use --robot?): Python/3.9.6-GCCcore-11.2.0, Meson/0.58.2-GCCcore-11.2.0, Ninja/1.10.2-GCCcore-11.2.0 | |
| == 2021-09-19 21:57:45,320 easyblock.py:300 INFO Closing log for application name GLib version 2.69.1 |
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