[R] Heatmap using ggplot2 https://rawgit.com/dceoy/5f3d99084d604b847447/raw/plot.svg

heatmap.R

#!/usr/bin/env Rscript

sapply(c('data.table', 'ggplot2'), function(p) require(p, character.only = TRUE))

mtx <- fread('matrix.csv')

heatmap <- ggplot(mtx, aes(x = col, y = row, fill = val)) +
             geom_tile() +
             scale_fill_gradient(trans = 'log', breaks = c(10, 100, 1000), low = 'grey', high = 'blue') +
             labs(x = 'col', y = 'row')

svg('plot.svg', width = 6, height = 4)
plot(heatmap)
dev.off()

matrix.csv

plot.svg

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