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def readcsv(filename):	
    ifile = open(filename, "rU")
    reader = csv.reader(ifile, delimiter=";")

    rownum = 0	
    a = []

    for row in reader:
        a.append (row)
        rownum += 1

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// converts UNIX seconds into relative format

function relativeDate($date) {
	$secondsago = time() - $date;
	if ($secondsago <= 59) {$timestamp = "less than a minute ago";}
	else if ($secondsago <= 119) {$timestamp = floor(($secondsago / 60)) . " minute ago (" . strftime('%R', $date) . ")";}
	else if ($secondsago <= 3599) {$timestamp = round(($secondsago / 60)) . " minutes ago (" . strftime('%R', $date) . ")";}
	else if ($secondsago <= 7199) {$timestamp = round(($secondsago / 3600),1) . " hours ago (" . strftime('%a %R', $date) . ")";}
	else if ($secondsago <= 86400) {$timestamp = round(($secondsago / 3600)) . " hours ago (" . strftime('%a %R', $date) . ")";}
	else if ($secondsago <= 345600) {$timestamp = round(($secondsago / 86400)) . " days ago (" . strftime('%a %R', $date) . ")";}

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#!/bin/bash
# This script recalculates all bounding boxes of all eps files in the same folder
# requires epstool

for f in *.eps
do
	g=$(echo $f | sed 's/\(.*\)\..*/\1/')
	echo Processing $f ...
	epstool --copy --bbox $g.eps $g-new.eps
done

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#!/bin/bash
# Puts all eps files in folder in figure environment

rm figures.tex

echo "\documentclass[a4paper,10pt]{article}
\usepackage[utf8]{inputenc}

\usepackage{graphicx} % support the \includegraphics command and options
\usepackage{epstopdf}

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\documentclass{article}

\usepackage{tikz}
\usepackage{pgfplots}
\usepackage[scaled]{helvet}
\usepackage[T1]{fontenc}
\usepackage{verbatim}

\renewcommand*\familydefault{\sfdefault} %% Only if the base font of the document is to be sans serif

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\documentclass{article}

\usepackage[scaled]{helvet}
\usepackage[T1]{fontenc}
\usepackage{verbatim}
\usepackage{graphicx}
\usepackage{epstopdf}
\usepackage[nomarkers,nofiglist,figuresonly]{endfloat}

\pagenumbering{gobble}  	% removes page numbering

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def rgb(r,g,b):  	# Just returns r, g, b in this case. Can be used to reformat RGB values if necessary.
	return r,g,b

def heat(min, max, val, type):		# Takes min and max values and the value to be heatmapped. Type is the look up table, see below.
	min = float(min)
	max = float(max)
	val = float(val)

	val = (val - min) / (max - min)		# normalize val to min and max

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#!/bin/bash
# This script creates eps files from all .gd or .exec files in a directory.

if [ ! -d "img/" ];
then
  mkdir img
fi

rm img/*-gd.eps
touch execfile		# Create execfile

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library(RColorBrewer)
brewer.pal(30, "RdYlBu")

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#!/bin/bash
# Rename image files with md5 hash

mkdir out

for f in *.tif
do
	splt=(${f//_/ })
	c=$(cat ${splt[0]}\_${splt[1]}\_* | md5) # 329L_23_*
	o=${splt[0]}\_${splt[1]}\-${c:0:10}\_${splt[2]}