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@dinya
Last active December 20, 2023 08:38
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Equidistant axis ticks for Holoviews boxplot chart (boxwhisker)
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{
"cells": [
{
"cell_type": "markdown",
"id": "9fbd1298-12b9-49cf-b938-149c8f8a40a1",
"metadata": {},
"source": [
"After https://holoviews.org/gallery/demos/bokeh/boxplot_chart.html"
]
},
{
"cell_type": "code",
"execution_count": 1,
"id": "f1d02aae-5e82-475a-9d68-0dfd16af546e",
"metadata": {},
"outputs": [
{
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" }\n",
" console.debug(\"Bokeh: all callbacks have finished\");\n",
" }\n",
"\n",
" function load_libs(css_urls, js_urls, js_modules, js_exports, callback) {\n",
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" window.requirejs.config({'packages': {}, 'paths': {'jspanel': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/jspanel', 'jspanel-modal': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal', 'jspanel-tooltip': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip', 'jspanel-hint': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint', 'jspanel-layout': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout', 'jspanel-contextmenu': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu', 'jspanel-dock': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock', 'gridstack': 'https://cdn.jsdelivr.net/npm/gridstack@7.2.3/dist/gridstack-all', 'notyf': 'https://cdn.jsdelivr.net/npm/notyf@3/notyf.min'}, 'shim': {'jspanel': {'exports': 'jsPanel'}, 'gridstack': {'exports': 'GridStack'}}});\n",
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"\tcontinue;\n",
" }\n",
" const element = document.createElement(\"link\");\n",
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" element.onerror = on_error;\n",
" element.rel = \"stylesheet\";\n",
" element.type = \"text/css\";\n",
" element.href = url;\n",
" console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n",
" document.body.appendChild(element);\n",
" } if (((window['jsPanel'] !== undefined) && (!(window['jsPanel'] instanceof HTMLElement))) || window.requirejs) {\n",
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" for (var i = 0; i < urls.length; i++) {\n",
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"\t on_load();\n",
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" element.onload = on_load;\n",
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" element.async = false;\n",
" element.src = url;\n",
" console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
" document.head.appendChild(element);\n",
" }\n",
" for (var i = 0; i < js_modules.length; i++) {\n",
" var url = js_modules[i];\n",
" if (skip.indexOf(url) !== -1 || existing_scripts.indexOf(url) !== -1) {\n",
"\tif (!window.requirejs) {\n",
"\t on_load();\n",
"\t}\n",
"\tcontinue;\n",
" }\n",
" var element = document.createElement('script');\n",
" element.onload = on_load;\n",
" element.onerror = on_error;\n",
" element.async = false;\n",
" element.src = url;\n",
" element.type = \"module\";\n",
" console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
" document.head.appendChild(element);\n",
" }\n",
" for (const name in js_exports) {\n",
" var url = js_exports[name];\n",
" if (skip.indexOf(url) >= 0 || root[name] != null) {\n",
"\tif (!window.requirejs) {\n",
"\t on_load();\n",
"\t}\n",
"\tcontinue;\n",
" }\n",
" var element = document.createElement('script');\n",
" element.onerror = on_error;\n",
" element.async = false;\n",
" element.type = \"module\";\n",
" console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
" element.textContent = `\n",
" import ${name} from \"${url}\"\n",
" window.${name} = ${name}\n",
" window._bokeh_on_load()\n",
" `\n",
" document.head.appendChild(element);\n",
" }\n",
" if (!js_urls.length && !js_modules.length) {\n",
" on_load()\n",
" }\n",
" };\n",
"\n",
" function inject_raw_css(css) {\n",
" const element = document.createElement(\"style\");\n",
" element.appendChild(document.createTextNode(css));\n",
" document.body.appendChild(element);\n",
" }\n",
"\n",
" var js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.3.0.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.3.0.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.3.0.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.3.0.min.js\", \"https://cdn.holoviz.org/panel/1.3.1/dist/panel.min.js\"];\n",
" var js_modules = [];\n",
" var js_exports = {};\n",
" var css_urls = [];\n",
" var inline_js = [ function(Bokeh) {\n",
" Bokeh.set_log_level(\"info\");\n",
" },\n",
"function(Bokeh) {} // ensure no trailing comma for IE\n",
" ];\n",
"\n",
" function run_inline_js() {\n",
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" }\n",
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" if (Bokeh != undefined && !reloading) {\n",
"\tvar NewBokeh = root.Bokeh;\n",
"\tif (Bokeh.versions === undefined) {\n",
"\t Bokeh.versions = new Map();\n",
"\t}\n",
"\tif (NewBokeh.version !== Bokeh.version) {\n",
"\t Bokeh.versions.set(NewBokeh.version, NewBokeh)\n",
"\t}\n",
"\troot.Bokeh = Bokeh;\n",
" }} else if (Date.now() < root._bokeh_timeout) {\n",
" setTimeout(run_inline_js, 100);\n",
" } else if (!root._bokeh_failed_load) {\n",
" console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n",
" root._bokeh_failed_load = true;\n",
" }\n",
" root._bokeh_is_initializing = false\n",
" }\n",
"\n",
" function load_or_wait() {\n",
" // Implement a backoff loop that tries to ensure we do not load multiple\n",
" // versions of Bokeh and its dependencies at the same time.\n",
" // In recent versions we use the root._bokeh_is_initializing flag\n",
" // to determine whether there is an ongoing attempt to initialize\n",
" // bokeh, however for backward compatibility we also try to ensure\n",
" // that we do not start loading a newer (Panel>=1.0 and Bokeh>3) version\n",
" // before older versions are fully initialized.\n",
" if (root._bokeh_is_initializing && Date.now() > root._bokeh_timeout) {\n",
" root._bokeh_is_initializing = false;\n",
" root._bokeh_onload_callbacks = undefined;\n",
" console.log(\"Bokeh: BokehJS was loaded multiple times but one version failed to initialize.\");\n",
" load_or_wait();\n",
" } else if (root._bokeh_is_initializing || (typeof root._bokeh_is_initializing === \"undefined\" && root._bokeh_onload_callbacks !== undefined)) {\n",
" setTimeout(load_or_wait, 100);\n",
" } else {\n",
" Bokeh = root.Bokeh;\n",
" bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n",
" root._bokeh_is_initializing = true\n",
" root._bokeh_onload_callbacks = []\n",
" if (!reloading && (!bokeh_loaded || is_dev)) {\n",
"\troot.Bokeh = undefined;\n",
" }\n",
" load_libs(css_urls, js_urls, js_modules, js_exports, function() {\n",
"\tconsole.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n",
"\trun_inline_js();\n",
" });\n",
" }\n",
" }\n",
" // Give older versions of the autoload script a head-start to ensure\n",
" // they initialize before we start loading newer version.\n",
" setTimeout(load_or_wait, 100)\n",
"}(window));"
],
"application/vnd.holoviews_load.v0+json": "(function(root) {\n function now() {\n return new Date();\n }\n\n var force = true;\n var py_version = '3.3.0'.replace('rc', '-rc.').replace('.dev', '-dev.');\n var is_dev = py_version.indexOf(\"+\") !== -1 || py_version.indexOf(\"-\") !== -1;\n var reloading = false;\n var Bokeh = root.Bokeh;\n var bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n\n if (typeof (root._bokeh_timeout) === \"undefined\" || force) {\n root._bokeh_timeout = Date.now() + 5000;\n root._bokeh_failed_load = false;\n }\n\n function run_callbacks() {\n try {\n root._bokeh_onload_callbacks.forEach(function(callback) {\n if (callback != null)\n callback();\n });\n } finally {\n delete root._bokeh_onload_callbacks;\n }\n console.debug(\"Bokeh: all callbacks have finished\");\n }\n\n function load_libs(css_urls, js_urls, js_modules, js_exports, callback) {\n if (css_urls == null) css_urls = [];\n if (js_urls == null) js_urls = [];\n if (js_modules == null) js_modules = [];\n if (js_exports == null) js_exports = {};\n\n root._bokeh_onload_callbacks.push(callback);\n\n if (root._bokeh_is_loading > 0) {\n console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n return null;\n }\n if (js_urls.length === 0 && js_modules.length === 0 && Object.keys(js_exports).length === 0) {\n run_callbacks();\n return null;\n }\n if (!reloading) {\n console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n }\n\n function on_load() {\n root._bokeh_is_loading--;\n if (root._bokeh_is_loading === 0) {\n console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n run_callbacks()\n }\n }\n window._bokeh_on_load = on_load\n\n function on_error() {\n console.error(\"failed to load \" + url);\n }\n\n var skip = [];\n if (window.requirejs) {\n window.requirejs.config({'packages': {}, 'paths': {'jspanel': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/jspanel', 'jspanel-modal': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal', 'jspanel-tooltip': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip', 'jspanel-hint': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint', 'jspanel-layout': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout', 'jspanel-contextmenu': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu', 'jspanel-dock': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock', 'gridstack': 'https://cdn.jsdelivr.net/npm/gridstack@7.2.3/dist/gridstack-all', 'notyf': 'https://cdn.jsdelivr.net/npm/notyf@3/notyf.min'}, 'shim': {'jspanel': {'exports': 'jsPanel'}, 'gridstack': {'exports': 'GridStack'}}});\n require([\"jspanel\"], function(jsPanel) {\n\twindow.jsPanel = jsPanel\n\ton_load()\n })\n require([\"jspanel-modal\"], function() {\n\ton_load()\n })\n require([\"jspanel-tooltip\"], function() {\n\ton_load()\n })\n require([\"jspanel-hint\"], function() {\n\ton_load()\n })\n require([\"jspanel-layout\"], function() {\n\ton_load()\n })\n require([\"jspanel-contextmenu\"], function() {\n\ton_load()\n })\n require([\"jspanel-dock\"], function() {\n\ton_load()\n })\n require([\"gridstack\"], function(GridStack) {\n\twindow.GridStack = GridStack\n\ton_load()\n })\n require([\"notyf\"], function() {\n\ton_load()\n })\n root._bokeh_is_loading = css_urls.length + 9;\n } else {\n root._bokeh_is_loading = css_urls.length + js_urls.length + js_modules.length + Object.keys(js_exports).length;\n }\n\n var existing_stylesheets = []\n var links = document.getElementsByTagName('link')\n for (var i = 0; i < links.length; i++) {\n var link = links[i]\n if (link.href != null) {\n\texisting_stylesheets.push(link.href)\n }\n }\n for (var i = 0; i < css_urls.length; i++) {\n var url = css_urls[i];\n if (existing_stylesheets.indexOf(url) !== -1) {\n\ton_load()\n\tcontinue;\n }\n const element = document.createElement(\"link\");\n element.onload = on_load;\n element.onerror = on_error;\n element.rel = \"stylesheet\";\n element.type = \"text/css\";\n element.href = url;\n console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n document.body.appendChild(element);\n } if (((window['jsPanel'] !== undefined) && (!(window['jsPanel'] instanceof HTMLElement))) || window.requirejs) {\n var urls = ['https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/jspanel.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock.js'];\n for (var i = 0; i < urls.length; i++) {\n skip.push(urls[i])\n }\n } if (((window['GridStack'] !== undefined) && (!(window['GridStack'] instanceof HTMLElement))) || window.requirejs) {\n var urls = ['https://cdn.holoviz.org/panel/1.3.1/dist/bundled/gridstack/gridstack@7.2.3/dist/gridstack-all.js'];\n for (var i = 0; i < urls.length; i++) {\n skip.push(urls[i])\n }\n } if (((window['Notyf'] !== undefined) && (!(window['Notyf'] instanceof HTMLElement))) || window.requirejs) {\n var urls = ['https://cdn.holoviz.org/panel/1.3.1/dist/bundled/notificationarea/notyf@3/notyf.min.js'];\n for (var i = 0; i < urls.length; i++) {\n skip.push(urls[i])\n }\n } var existing_scripts = []\n var scripts = document.getElementsByTagName('script')\n for (var i = 0; i < scripts.length; i++) {\n var script = scripts[i]\n if (script.src != null) {\n\texisting_scripts.push(script.src)\n }\n }\n for (var i = 0; i < js_urls.length; i++) {\n var url = js_urls[i];\n if (skip.indexOf(url) !== -1 || existing_scripts.indexOf(url) !== -1) {\n\tif (!window.requirejs) {\n\t on_load();\n\t}\n\tcontinue;\n }\n var element = document.createElement('script');\n element.onload = on_load;\n element.onerror = on_error;\n element.async = false;\n element.src = url;\n console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n document.head.appendChild(element);\n }\n for (var i = 0; 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" style='height:15px; border-radius:12px; display: inline-block; float: left'></img>\n",
" \n",
"\n",
"\n",
"\n",
"\n",
"</div>\n"
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"from typing import Optional\n",
"\n",
"import numpy as np\n",
"import pandas as pd\n",
"\n",
"import holoviews as hv\n",
"from holoviews import dim\n",
"\n",
"from bokeh.sampledata.autompg import autompg as df\n",
"\n",
"hv.extension('bokeh')"
]
},
{
"cell_type": "code",
"execution_count": 2,
"id": "7cecd50b-5bae-4656-a044-ea7cd85831b5",
"metadata": {},
"outputs": [],
"source": [
"def plot(df: pd.DataFrame, date_label: str, hue_label: str, param_label: str, title: str = \"\") -> hv.BoxWhisker:\n",
" boxwhisker = hv.BoxWhisker(df, [date_label, hue_label], param_label, label=title)\n",
" boxwhisker.opts(\n",
" show_legend=False,\n",
" width=600,\n",
" box_fill_color=dim(hue_label).str(),\n",
" cmap='Set1',\n",
" show_grid=True\n",
" )\n",
" return boxwhisker"
]
},
{
"cell_type": "code",
"execution_count": 3,
"id": "48e9bc94-762c-4ae9-95a9-8489cfb79fc0",
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<div>\n",
"<style scoped>\n",
" .dataframe tbody tr th:only-of-type {\n",
" vertical-align: middle;\n",
" }\n",
"\n",
" .dataframe tbody tr th {\n",
" vertical-align: top;\n",
" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: right;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>mpg</th>\n",
" <th>cyl</th>\n",
" <th>displ</th>\n",
" <th>hp</th>\n",
" <th>weight</th>\n",
" <th>accel</th>\n",
" <th>yr</th>\n",
" <th>origin</th>\n",
" <th>name</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>18.0</td>\n",
" <td>8</td>\n",
" <td>307.0</td>\n",
" <td>130</td>\n",
" <td>3504</td>\n",
" <td>12.0</td>\n",
" <td>70</td>\n",
" <td>1</td>\n",
" <td>chevrolet chevelle malibu</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
" <td>15.0</td>\n",
" <td>8</td>\n",
" <td>350.0</td>\n",
" <td>165</td>\n",
" <td>3693</td>\n",
" <td>11.5</td>\n",
" <td>70</td>\n",
" <td>1</td>\n",
" <td>buick skylark 320</td>\n",
" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
" <td>18.0</td>\n",
" <td>8</td>\n",
" <td>318.0</td>\n",
" <td>150</td>\n",
" <td>3436</td>\n",
" <td>11.0</td>\n",
" <td>70</td>\n",
" <td>1</td>\n",
" <td>plymouth satellite</td>\n",
" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
" <td>16.0</td>\n",
" <td>8</td>\n",
" <td>304.0</td>\n",
" <td>150</td>\n",
" <td>3433</td>\n",
" <td>12.0</td>\n",
" <td>70</td>\n",
" <td>1</td>\n",
" <td>amc rebel sst</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
" <td>17.0</td>\n",
" <td>8</td>\n",
" <td>302.0</td>\n",
" <td>140</td>\n",
" <td>3449</td>\n",
" <td>10.5</td>\n",
" <td>70</td>\n",
" <td>1</td>\n",
" <td>ford torino</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" mpg cyl displ hp weight accel yr origin name\n",
"0 18.0 8 307.0 130 3504 12.0 70 1 chevrolet chevelle malibu\n",
"1 15.0 8 350.0 165 3693 11.5 70 1 buick skylark 320\n",
"2 18.0 8 318.0 150 3436 11.0 70 1 plymouth satellite\n",
"3 16.0 8 304.0 150 3433 12.0 70 1 amc rebel sst\n",
"4 17.0 8 302.0 140 3449 10.5 70 1 ford torino"
]
},
"execution_count": 3,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"df.head()"
]
},
{
"cell_type": "code",
"execution_count": 4,
"id": "3b76ee1d-b2bd-41a5-94b2-5b2d19f392ad",
"metadata": {},
"outputs": [],
"source": [
"date_label = \"cyl\"\n",
"hue_label = \"origin\"\n",
"param_label = \"mpg\""
]
},
{
"cell_type": "markdown",
"id": "715b4207-b3e5-4bf1-af30-43559ba20316",
"metadata": {},
"source": [
"# Without filling\n",
"\n",
"Original example from https://holoviews.org/gallery/demos/bokeh/boxplot_chart.html"
]
},
{
"cell_type": "code",
"execution_count": 5,
"id": "83b9e76f-f416-41fc-9c59-ecc16cf4c8bf",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"3 [3]\n",
"4 [3 2 1]\n",
"5 [2]\n",
"6 [1 3 2]\n",
"8 [1]\n"
]
}
],
"source": [
"for date, df_date in df.groupby(by=date_label):\n",
" print(date, df_date[hue_label].unique())"
]
},
{
"cell_type": "code",
"execution_count": 6,
"id": "44361dd0-eb73-4f72-b3a8-585a235c79e2",
"metadata": {},
"outputs": [
{
"data": {},
"metadata": {},
"output_type": "display_data"
},
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"\t if (Bokeh == null || Bokeh.Panel == null) {\n",
" console.warn(\"Panel: ERROR: Unable to run Panel code because Bokeh or Panel library is missing\");\n",
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"\t console.warn(\"Panel: WARNING: Attempting to render but not all required libraries could be resolved.\")\n",
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],
"text/plain": [
":BoxWhisker [cyl,origin] (mpg)"
]
},
"execution_count": 6,
"metadata": {
"application/vnd.holoviews_exec.v0+json": {
"id": "p1004"
}
},
"output_type": "execute_result"
}
],
"source": [
"plot(df=df, date_label=date_label, hue_label=hue_label, param_label=param_label, title=\"Without filling\")"
]
},
{
"cell_type": "markdown",
"id": "4c4d0c9b-1d5c-4eee-9900-f57a2a71970e",
"metadata": {},
"source": [
"# With filling\n",
"\n",
"Add nulls to prettify plot (equdistant axis ticks)."
]
},
{
"cell_type": "code",
"execution_count": 7,
"id": "26f1f129-e1e5-43bf-979b-c3f20b07374c",
"metadata": {},
"outputs": [],
"source": [
"def fill_na(df: pd.DataFrame, date_label: str, hue_label: str):\n",
" # Convert to pandas nullable types\n",
" # See also https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.DataFrame.convert_dtypes.html\n",
" # for col in df.columns:\n",
" # if df[col].dtype == \"float64\":\n",
" # df[col] = df[col].astype(\"Float64\")\n",
" # elif df[col].dtype == \"int64\":\n",
" # df[col] = df[col].astype(\"Int64\")\n",
" # elif df[col].dtype == \"object\":\n",
" # df[col] = df[col].astype(\"string\")\n",
" df = df.convert_dtypes()\n",
" \n",
" # Add null hues on current date\n",
" uique_hues = set(sorted(df[hue_label].unique()))\n",
" for date, df_date in df.groupby(by=date_label):\n",
" date_hue = set(df_date[hue_label].unique())\n",
" missing_hues = uique_hues - date_hue\n",
" for hue in missing_hues:\n",
" new_row = pd.Series(df.columns.shape[0] * [pd.NA, ], index=df.columns)\n",
" new_row[date_label] = date\n",
" new_row[hue_label] = hue\n",
" df = pd.concat([df, new_row.set_axis(df.columns).to_frame().T.astype(df.dtypes)], ignore_index=True)\n",
" #df.loc[len(df)] = new_row.values\n",
"\n",
" # Add null dates\n",
" unique_dates = set(sorted(df[date_label].unique()))\n",
" min_date = min(unique_dates)\n",
" max_date = max(unique_dates)\n",
" equidistant_dates = set(range(min_date, max_date + 1))\n",
" missing_dates = equidistant_dates - unique_dates\n",
" for date in missing_dates:\n",
" for hue in uique_hues:\n",
" new_row = pd.Series(df.columns.shape[0] * [pd.NA, ], index=df.columns)\n",
" new_row[date_label] = date\n",
" new_row[hue_label] = hue\n",
" df = pd.concat([df, new_row.set_axis(df.columns).to_frame().T.astype(df.dtypes)], ignore_index=True)\n",
" #df.loc[len(df)] = new_row.values\n",
" \n",
" # for date, df_date in df.groupby(by=date_label):\n",
" # print(date, df_date[hue_label].unique())\n",
" return df"
]
},
{
"cell_type": "code",
"execution_count": 8,
"id": "54a4ce02-d66c-4806-82dd-7e8af71931ce",
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"3 <IntegerArray>\n",
"[3, 1, 2]\n",
"Length: 3, dtype: Int64\n",
"4 <IntegerArray>\n",
"[3, 2, 1]\n",
"Length: 3, dtype: Int64\n",
"5 <IntegerArray>\n",
"[2, 1, 3]\n",
"Length: 3, dtype: Int64\n",
"6 <IntegerArray>\n",
"[1, 3, 2]\n",
"Length: 3, dtype: Int64\n",
"7 <IntegerArray>\n",
"[1, 2, 3]\n",
"Length: 3, dtype: Int64\n",
"8 <IntegerArray>\n",
"[1, 2, 3]\n",
"Length: 3, dtype: Int64\n"
]
}
],
"source": [
"df = fill_na(df, date_label, hue_label)\n",
"\n",
"for date, df_date in df.groupby(by=date_label):\n",
" print(date, df_date[hue_label].unique())"
]
},
{
"cell_type": "code",
"execution_count": 9,
"id": "40bbc7c7-730b-45ce-ad16-695781ce8a11",
"metadata": {},
"outputs": [
{
"data": {},
"metadata": {},
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},
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"<script type=\"application/javascript\">(function(root) {\n",
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],
"text/plain": [
":BoxWhisker [cyl,origin] (mpg)"
]
},
"execution_count": 9,
"metadata": {
"application/vnd.holoviews_exec.v0+json": {
"id": "p1148"
}
},
"output_type": "execute_result"
}
],
"source": [
"plot(df=df, date_label=date_label, hue_label=hue_label, param_label=param_label, title=\"With filling\")"
]
},
{
"cell_type": "markdown",
"id": "cab7353c-8dca-4c40-b36e-3a9ca3f4f5ad",
"metadata": {},
"source": [
"See also:\n",
"\n",
"1. https://holoviews.org/gallery/demos/bokeh/boxplot_chart.html\n",
"2. https://holoviews.org/reference/elements/bokeh/BoxWhisker.html\n",
"3. Add line to holoviews plot https://discourse.holoviz.org/t/recreate-seaborn-boxplot-with-multiple-categories-with-holoview-of-bokeh/3224/2\n",
"4. https://docs.bokeh.org/en/dev-3.4/docs/examples/topics/stats/boxplot.html"
]
}
],
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