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Created November 8, 2022 15:21
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EasyBuild test report for easybuilders/easybuild-easyconfigs PR(s) #16564
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easybuild_test_report_16564_easybuilders_preasybuild-easyconfigs_20222108-UTC-15-21-16.md

Test report for PR(s) easybuilders/easybuild-easyconfigs#16564

Test result

Build succeeded for 1 out of 1 (1 easyconfigs in total)

Overview of tested easyconfigs (in order)

  • SUCCESS Panedr-0.7.0-foss-2021a.eb

Time info

  • start: Tue, 08 Nov 2022 15:19:22 +0000 (UTC)
  • end: Tue, 08 Nov 2022 15:21:16 +0000 (UTC)

EasyBuild info

  • easybuild-framework version: 4.6.2
  • easybuild-easyblocks version: 4.6.2
  • command line:
eb --from-pr 16564 -fru
  • full configuration (includes defaults):
--accept-eula-for='Intel-oneAPI,NVHPC'
--accept-eula=''
--allow-loaded-modules='EasyBuild'
--buildpath='/tmp/jfg508'
--check-ebroot-env-vars='warn'
--cleanup-builddir
--cleanup-easyconfigs
--cleanup-tmpdir
--color='auto'
--container-type='singularity'
--containerpath='/users/jfg508/scratch/easybuild-dev/containers'
--default-opt-level='defaultopt'
--detect-loaded-modules='warn'
--disable-add-dummy-to-minimal-toolchains
--disable-add-system-to-minimal-toolchains
--disable-allow-modules-tool-mismatch
--disable-allow-use-as-root-and-accept-consequences
--disable-avail-cfgfile-constants
--disable-avail-easyconfig-constants
--disable-avail-easyconfig-licenses
--disable-avail-easyconfig-params
--disable-avail-easyconfig-templates
--disable-avail-hooks
--disable-avail-module-naming-schemes
--disable-avail-modules-tools
--disable-avail-repositories
--disable-backup-patched-files
--disable-check-conflicts
--disable-check-contrib
--disable-check-eb-deps
--disable-check-github
--disable-check-style
--disable-consider-archived-easyconfigs
--disable-container-build-image
--disable-containerize
--disable-copy-ec
--disable-debug
--disable-debug-lmod
--disable-devel
--disable-dry-run
--disable-dry-run-short
--disable-dump-autopep8
--disable-dump-env-script
--disable-enforce-checksums
--disable-experimental
--disable-extended-dry-run
--disable-fetch
--disable-fix-deprecated-easyconfigs
--disable-group-writable-installdir
--disable-hidden
--disable-ignore-checksums
--disable-ignore-index
--disable-ignore-locks
--disable-ignore-osdeps
--disable-ignore-test-failure
--disable-info
--disable-insecure-download
--disable-install-github-token
--disable-install-latest-eb-release
--disable-job
--disable-last-log
--disable-list-toolchains
--disable-logtostdout
--disable-minimal-toolchains
--disable-missing-modules
--disable-module-depends-on
--disable-module-extensions
--disable-module-only
--disable-new-branch-github
--disable-new-pr
--disable-package
--disable-parallel-extensions-install
--disable-pretend
--disable-preview-pr
--disable-quiet
--disable-read-only-installdir
--disable-rebuild
--disable-recursive-module-unload
--disable-regtest
--disable-remove-ghost-install-dirs
--disable-rpath
--disable-sanity-check-only
--disable-sequential
--disable-set-default-module
--disable-set-gid-bit
--disable-show-config
--disable-show-default-configfiles
--disable-show-default-moduleclasses
--disable-show-ec
--disable-show-full-config
--disable-show-system-info
--disable-skip
--disable-skip-extensions
--disable-skip-test-cases
--disable-skip-test-step
--disable-sticky-bit
--disable-terse
--disable-try-ignore-versionsuffixes
--disable-try-update-deps
--disable-unit-testing-mode
--disable-update-modules-tool-cache
--disable-use-existing-modules
--disable-verify-easyconfig-filenames
--env-for-shebang='/usr/bin/env'
--envvars-user-modules='HOME'
--extended-dry-run-ignore-errors
--fixed-installdir-naming-scheme
--force
--from-pr='16564'
--generate-devel-module
--git-working-dirs-path='/users/jfg508/scratch/easybuild-dev/test_repo'
--github-user='jfgrimm'
--ignore-dirs='.git,.svn'
--include-easyblocks-from-pr=''
--include-easyblocks=''
--include-module-naming-schemes=''
--include-toolchains=''
--index-max-age='604800'
--installpath='/users/jfg508/scratch/easybuild-dev'
--job-backend='GC3Pie'
--job-eb-cmd='eb'
--job-max-jobs='0'
--job-max-walltime='24'
--job-output-dir='/mnt/lustre/users/jfg508/easybuild-dev/pkg/c/coinhsl'
--job-polling-interval='30.0'
--lib-lib64-symlink
--lib64-fallback-sanity-check
--lib64-lib-symlink
--local-var-naming-check='warn'
--logfile-format='easybuild,easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log'
--map-toolchains
--max-fail-ratio-adjust-permissions='0.5'
--minimal-build-env='CC:gcc,CXX:g++'
--module-naming-scheme='CategorizedModuleNamingScheme'
--module-syntax='Lua'
--moduleclasses='base,ai,astro,bio,cae,chem,compiler,data,debugger,devel,geo,ide,lang,lib,math,mpi,numlib,perf,quantum,phys,system,toolchain,tools,vis'
--modules-tool-version-check
--modules-tool='Lmod'
--mpi-tests
--output-format='txt'
--output-style='auto'
--package-naming-scheme='EasyBuildPNS'
--package-release='1'
--package-tool-options=''
--package-tool='fpm'
--package-type='rpm'
--packagepath='/users/jfg508/scratch/easybuild-dev/packages'
--pr-target-account='easybuilders'
--pr-target-branch='develop'
--pre-create-installdir
--prefix='/users/jfg508/scratch/easybuild-dev'
--repository='FileRepository'
--repositorypath='/users/jfg508/scratch/easybuild-dev/ebfiles_repo'
--robot-paths='/users/jfg508/scratch/easybuild-dev/easyconfigs:/users/jfg508/scratch/easybuild-dev/uoy-easyconfigs/easyconfigs:/opt/apps/easybuild/easybuild-easyconfigs/easybuild/easyconfigs'
--robot='/users/jfg508/scratch/easybuild-dev/easyconfigs:/users/jfg508/scratch/easybuild-dev/uoy-easyconfigs/easyconfigs:/opt/apps/easybuild/easybuild-easyconfigs/easybuild/easyconfigs'
--show-progress-bar
--sourcepath='/users/jfg508/scratch/easybuild-dev/pkg:/opt/apps/easybuild/pkg:/opt/apps/easybuild/sources'
--strict='warn'
--subdir-modules='modules'
--subdir-software='software'
--suffix-modules-path='all'
--test-report-env-filter='\'^SSH|USER|HOSTNAME|UID|.*COOKIE.*|.*LICENSE.*|.*LICENSE.*|.*KEY.*\''
--trace
--upload-test-report
--use-ccache='False'
--use-f90cache='False'
--wait-on-lock-interval='60'
--wait-on-lock-limit='0'

System info

  • core count: 40
  • cpu arch: x86_64
  • cpu arch name: skylake_avx512
  • cpu model: Intel(R) Xeon(R) Gold 6138 CPU @ 2.00GHz
  • cpu speed: 3700.0
  • cpu vendor: Intel
  • gcc version: Using built-in specs.; COLLECT_GCC=gcc; COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper; Target: x86_64-redhat-linux; Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux; Thread model: posix; gcc version 4.8.5 20150623 (Red Hat 4.8.5-44) (GCC) ;
  • glibc version: 2.17
  • hostname: node146.pri.viking.alces.network
  • os name: CentOS Linux
  • os type: Linux
  • os version: 7.9.2009
  • platform name: x86_64-unknown-linux
  • python version: 3.6.8 (default, Nov 16 2020, 16:55:22) ; [GCC 4.8.5 20150623 (Red Hat 4.8.5-44)]
  • system gcc path: /usr/bin/gcc
  • system python path: /usr/bin/python
  • total memory: 191865

List of loaded modules

  • development
  • tools/EasyBuild/4.6.2

Environment

BASH_ENV = /opt/apps/lmod/lmod/init/bash
BASH_FUNC__cw_root() = () {  echo "$cw_ROOT"
}
BASH_FUNC__flight() = () {  ( set -e;
 source "$FL_ROOT"/etc/runtime.sh;
 cd "$FL_ROOT";
 bin/flight "$@" )
}
BASH_FUNC_al() = () {  flight "$@"
}
BASH_FUNC_alces() = () {  flight "$@"
}
BASH_FUNC_fl() = () {  flight "$@"
}
BASH_FUNC_flight() = () {  if [[ $1 == 'mo'* && 'module' == "$1"* ]]; then
 shift 1;
 if [[ ! $(ps -o 'command=' -p "$$" 2>/dev/null) =~ ^- ]]; then
 if [[ ! ":$cw_FLAGS:" =~ :verbose-modules: ]]; then
 export cw_MODULES_VERBOSE=0;
 fi;
 fi;
 case $1 in 
 fl* | al* | h* | -h | --help)
 if [[ ":$cw_FLAGS:" =~ :nopager: ]]; then
 _flight 'module' "$@" 0>&1 2>&1;
 else
 _flight 'module' "$@" 0>&1 2>&1 | less -FRX;
 fi
 ;;
 *)
 if [[ ":$cw_FLAGS:" =~ :nopager: ]]; then
 eval $(_flight 'module' "$@") 2>&1;
 else
 if [ -n "$POSIXLY_CORRECT" ]; then
 eval $(_flight 'module' "$@") 2>&1;
 else
 if [ "$1" == "load" -o "$1" == "add" ]; then
 eval $(_flight 'module' "$@") 2>&1;
 else
 eval $(source $FL_ROOT/etc/runtime.sh && $FL_ROOT/bin/flight 'module' "$@" 2> >(less -FRX >&2)) 2>&1;
 fi;
 fi;
 fi
 ;;
 esac;
 else
 _flight "$@";
 fi
}
BASH_FUNC_ml() = () {  eval $($LMOD_DIR/ml_cmd "$@")
}
BASH_FUNC_module() = () {  eval $($LMOD_CMD bash "$@") && eval $(${LMOD_SETTARG_CMD:-:} -s sh)
}
CFGS1 = /users/jfg508/scratch/easybuild-dev/easybuild-easyconfigs/easybuild/easyconfigs
CMAKE_PREFIX_PATH = /users/jfg508/scratch/easybuild-dev/software/EasyBuild/4.6.2
DISPLAY = localhost:14.0
EASYBUILD_ACCEPT_EULA_FOR = Intel-oneAPI,NVHPC
EASYBUILD_BUILDPATH = /tmp/jfg508
EASYBUILD_GIT_WORKING_DIRS_PATH = /users/jfg508/scratch/easybuild-dev/test_repo
EASYBUILD_INSTALLPATH = /users/jfg508/scratch/easybuild-dev
EASYBUILD_MODULES_TOOL = Lmod
EASYBUILD_MODULE_NAMING_SCHEME = CategorizedModuleNamingScheme
EASYBUILD_PREFIX = /users/jfg508/scratch/easybuild-dev
EASYBUILD_ROBOT_PATHS = /users/jfg508/scratch/easybuild-dev/easyconfigs:/users/jfg508/scratch/easybuild-dev/uoy-easyconfigs/easyconfigs:/opt/apps/easybuild/easybuild-easyconfigs/easybuild/easyconfigs
EASYBUILD_SOURCEPATH = /users/jfg508/scratch/easybuild-dev/pkg:/opt/apps/easybuild/pkg:/opt/apps/easybuild/sources
EASYBUILD_TEST_REPORT_ENV_FILTER = '^SSH|USER|HOSTNAME|UID|.*COOKIE.*|.*LICENSE.*|.*LICENSE.*|.*KEY.*'
EASYBUILD_TRACE = 1
EBDEVELEASYBUILD = /users/jfg508/scratch/easybuild-dev/software/EasyBuild/4.6.2/easybuild/tools-EasyBuild-4.6.2-easybuild-devel
EBROOTEASYBUILD = /users/jfg508/scratch/easybuild-dev/software/EasyBuild/4.6.2
EBVERSIONEASYBUILD = 4.6.2
EB_INSTALLPYTHON = /usr/bin/python3
EB_SCRIPT_PATH = /users/jfg508/scratch/easybuild-dev/software/EasyBuild/4.6.2/bin/eb
FANCYLOGGER_IGNORE_MPI4PY = 1
FL_ROOT = /opt/flight-direct
FL_SOURCED = true
HISTCONTROL = ignoredups
HISTSIZE = 1000
HOME = /users/jfg508
LANG = en_GB.UTF-8
LESSOPEN = ||/usr/bin/lesspipe.sh %s
LMOD_CMD = /opt/apps/lmod/lmod/libexec/lmod
LMOD_DIR = /opt/apps/lmod/lmod/libexec
LMOD_PKG = /opt/apps/lmod/lmod
LMOD_SETTARG_FULL_SUPPORT = no
LMOD_VERSION = 7.8
LMOD_sys = Linux
LOADEDMODULES = development:tools/EasyBuild/4.6.2
LOGNAME = jfg508
LS_COLORS = rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arc=01;31:*.arj=01;31:*.taz=01;31:*.lha=01;31:*.lz4=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.tzo=01;31:*.t7z=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lrz=01;31:*.lz=01;31:*.lzo=01;31:*.xz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.alz=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.cab=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.webm=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:
MAIL = /var/spool/mail/jfg508
MANPATH = /opt/apps/lmod/lmod/share/man:
MODULEPATH = /users/jfg508/scratch/easybuild-dev/modules/all:/etc/modulefiles:/usr/share/modulefiles:/opt/apps/easybuild/modules/base:/opt/apps/easybuild/modules/bio:/opt/apps/easybuild/modules/cae:/opt/apps/easybuild/modules/chem:/opt/apps/easybuild/modules/compiler:/opt/apps/easybuild/modules/data:/opt/apps/easybuild/modules/debugger:/opt/apps/easybuild/modules/devel:/opt/apps/easybuild/modules/geo:/opt/apps/easybuild/modules/ide:/opt/apps/easybuild/modules/lang:/opt/apps/easybuild/modules/lib:/opt/apps/easybuild/modules/math:/opt/apps/easybuild/modules/mpi:/opt/apps/easybuild/modules/numlib:/opt/apps/easybuild/modules/perf:/opt/apps/easybuild/modules/phys:/opt/apps/easybuild/modules/system:/opt/apps/easybuild/modules/toolchain:/opt/apps/easybuild/modules/tools:/opt/apps/easybuild/modules/vis:/opt/apps/easybuild/modules/all:/users/jfg508/scratch/eb_env:/users/jfg508/scratch/easybuild-dev/modules
MODULEPATH_ROOT = /opt/apps/modulefiles
MODULESHOME = /opt/apps/lmod/lmod
PATH = /users/jfg508/scratch/easybuild-dev/software/EasyBuild/4.6.2/bin:/users/jfg508/.yarn/bin:/users/jfg508/.config/yarn/global/node_modules/.bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/users/jfg508/.local/bin:/users/jfg508/bin:/opt/dell/srvadmin/bin
PWD = /users/jfg508/scratch/easybuild-dev/pkg/c/coinhsl
PYTHONOPTIMIZE = 1
PYTHONPATH = /users/jfg508/scratch/easybuild-dev/software/EasyBuild/4.6.2/lib/python3.6/site-packages
SHELL = /bin/bash
SHLVL = 3
SLURMD_NODENAME = node146
SLURM_CLUSTER_NAME = viking
SLURM_CONF = /etc/slurm/slurm.conf
SLURM_CPUS_ON_NODE = 40
SLURM_GTIDS = 0
SLURM_JOBID = 20020662
SLURM_JOB_ACCOUNT = its-system-2018
SLURM_JOB_CPUS_PER_NODE = 40
SLURM_JOB_GID = 1447400001
SLURM_JOB_ID = 20020662
SLURM_JOB_NAME = bash
SLURM_JOB_NODELIST = node146
SLURM_JOB_NUM_NODES = 1
SLURM_JOB_PARTITION = nodes
SLURM_JOB_QOS = normal
SLURM_LAUNCH_NODE_IPADDR = 10.10.6.1
SLURM_LOCALID = 0
SLURM_NNODES = 1
SLURM_NODEID = 0
SLURM_NODELIST = node146
SLURM_NPROCS = 1
SLURM_NTASKS = 1
SLURM_PRIO_PROCESS = 0
SLURM_PROCID = 0
SLURM_PTY_PORT = 45996
SLURM_PTY_WIN_COL = 190
SLURM_PTY_WIN_ROW = 43
SLURM_SRUN_COMM_HOST = 10.10.6.1
SLURM_SRUN_COMM_PORT = 42266
SLURM_STEPID = 0
SLURM_STEP_ID = 0
SLURM_STEP_LAUNCHER_PORT = 42266
SLURM_STEP_NODELIST = node146
SLURM_STEP_NUM_NODES = 1
SLURM_STEP_NUM_TASKS = 1
SLURM_STEP_TASKS_PER_NODE = 1
SLURM_SUBMIT_DIR = /users/jfg508
SLURM_SUBMIT_HOST = login1.pri.viking.alces.network
SLURM_TASKS_PER_NODE = 1
SLURM_TASK_PID = 116430
SLURM_TOPOLOGY_ADDR = ibcore[01-03].ibedge07.node146
SLURM_TOPOLOGY_ADDR_PATTERN = switch.switch.node
SLURM_UMASK = 0022
SLURM_WORKING_CLUSTER = viking:infra02:6817:9728:101
SRUN_DEBUG = 3
SSH_CLIENT = 172.18.77.67 56428 55890
SSH_CONNECTION = 172.18.77.67 56428 144.32.247.21 55890
SSH_TTY = /dev/pts/2
STY = 117426.EB_PR
TERM = screen
TERMCAP = SC|screen|VT 100/ANSI X3.64 virtual terminal:\
	:DO=\E[%dB:LE=\E[%dD:RI=\E[%dC:UP=\E[%dA:bs:bt=\E[Z:\
	:cd=\E[J:ce=\E[K:cl=\E[H\E[J:cm=\E[%i%d;%dH:ct=\E[3g:\
	:do=^J:nd=\E[C:pt:rc=\E8:rs=\Ec:sc=\E7:st=\EH:up=\EM:\
	:le=^H:bl=^G:cr=^M:it#8:ho=\E[H:nw=\EE:ta=^I:is=\E)0:\
	:li#43:co#190:am:xn:xv:LP:sr=\EM:al=\E[L:AL=\E[%dL:\
	:cs=\E[%i%d;%dr:dl=\E[M:DL=\E[%dM:dc=\E[P:DC=\E[%dP:\
	:im=\E[4h:ei=\E[4l:mi:IC=\E[%d@:ks=\E[?1h\E=:\
	:ke=\E[?1l\E>:vi=\E[?25l:ve=\E[34h\E[?25h:vs=\E[34l:\
	:ti=\E[?1049h:te=\E[?1049l:us=\E[4m:ue=\E[24m:so=\E[3m:\
	:se=\E[23m:mb=\E[5m:md=\E[1m:mr=\E[7m:me=\E[m:ms:\
	:Co#8:pa#64:AF=\E[3%dm:AB=\E[4%dm:op=\E[39;49m:AX:\
	:vb=\Eg:G0:as=\E(0:ae=\E(B:\
	:ac=\140\140aaffggjjkkllmmnnooppqqrrssttuuvvwwxxyyzz{{||}}~~..--++,,hhII00:\
	:po=\E[5i:pf=\E[4i:Km=\E[M:k0=\E[10~:k1=\EOP:k2=\EOQ:\
	:k3=\EOR:k4=\EOS:k5=\E[15~:k6=\E[17~:k7=\E[18~:\
	:k8=\E[19~:k9=\E[20~:k;=\E[21~:F1=\E[23~:F2=\E[24~:\
	:F3=\E[1;2P:F4=\E[1;2Q:F5=\E[1;2R:F6=\E[1;2S:\
	:F7=\E[15;2~:F8=\E[17;2~:F9=\E[18;2~:FA=\E[19;2~:kb=�:\
	:K2=\EOE:kB=\E[Z:kF=\E[1;2B:kR=\E[1;2A:*4=\E[3;2~:\
	:*7=\E[1;2F:#2=\E[1;2H:#3=\E[2;2~:#4=\E[1;2D:%c=\E[6;2~:\
	:%e=\E[5;2~:%i=\E[1;2C:kh=\E[1~:@1=\E[1~:kH=\E[4~:\
	:@7=\E[4~:kN=\E[6~:kP=\E[5~:kI=\E[2~:kD=\E[3~:ku=\EOA:\
	:kd=\EOB:kr=\EOC:kl=\EOD:km:
TMPDIR = /tmp
WINDOW = 0
XDG_DATA_DIRS = /users/jfg508/.local/share/flatpak/exports/share:/var/lib/flatpak/exports/share:/usr/local/share:/usr/share
XDG_RUNTIME_DIR = /run/user/54154
XDG_SESSION_ID = 180818
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