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hgnc_gene_lookup.ipynb
{
"cells": [
{
"cell_type": "code",
"execution_count": 1,
"id": "1035c39e",
"metadata": {},
"outputs": [],
"source": [
"from urllib.parse import quote_plus\n",
"import pandas as pd\n",
"import numpy as np\n",
"import tqdm\n",
"import requests"
]
},
{
"cell_type": "code",
"execution_count": 2,
"id": "316a2076",
"metadata": {},
"outputs": [],
"source": [
"def get_hgnc_matches(text):\n",
" query = quote_plus(text.replace('/', '\\\\'))\n",
" url = f'http://rest.genenames.org/search/{query}'\n",
" res = requests.get(url, headers={'Accept': 'application/json'})\n",
" return pd.DataFrame([\n",
" dict(hgnc_id=m['hgnc_id'], gene_symbol=m['symbol'], score=m['score'])\n",
" for m in res.json()['response']['docs']\n",
" ], columns=['hgnc_id', 'gene_symbol', 'score'])"
]
},
{
"cell_type": "code",
"execution_count": 3,
"id": "13a4071d",
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<div>\n",
"<style scoped>\n",
" .dataframe tbody tr th:only-of-type {\n",
" vertical-align: middle;\n",
" }\n",
"\n",
" .dataframe tbody tr th {\n",
" vertical-align: top;\n",
" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: right;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>hgnc_id</th>\n",
" <th>gene_symbol</th>\n",
" <th>score</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>HGNC:20001</td>\n",
" <td>PCSK9</td>\n",
" <td>466.37290</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
" <td>HGNC:8743</td>\n",
" <td>PCSK1</td>\n",
" <td>409.06723</td>\n",
" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
" <td>HGNC:17301</td>\n",
" <td>PCSK1N</td>\n",
" <td>409.06723</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" hgnc_id gene_symbol score\n",
"0 HGNC:20001 PCSK9 466.37290\n",
"1 HGNC:8743 PCSK1 409.06723\n",
"2 HGNC:17301 PCSK1N 409.06723"
]
},
"execution_count": 3,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"get_hgnc_matches('Proprotein convertase subtilisin/kexin type 9').head(3)"
]
},
{
"cell_type": "code",
"execution_count": 4,
"id": "6e7de12a",
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
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"\n",
" .dataframe thead th {\n",
" text-align: right;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>term</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>nsp3 Papain-like protease domain</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
" <td>antibodies</td>\n",
" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
" <td>avelumab</td>\n",
" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
" <td>pidilizumab</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
" <td>Nivolumab</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" term\n",
"0 nsp3 Papain-like protease domain\n",
"1 antibodies\n",
"2 avelumab\n",
"3 pidilizumab\n",
"4 Nivolumab"
]
},
"execution_count": 4,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"df = pd.read_csv('Downloads/protein_annotations_without_hgnc_or_fplx_matches.csv', sep=\",\", names=['term'])\n",
"df.head()"
]
},
{
"cell_type": "code",
"execution_count": 5,
"id": "6dc892c5",
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"100%|██████████| 500/500 [10:34<00:00, 1.27s/it]"
]
},
{
"name": "stdout",
"output_type": "stream",
"text": [
"<class 'pandas.core.frame.DataFrame'>\n",
"RangeIndex: 1078 entries, 0 to 1077\n",
"Data columns (total 5 columns):\n",
" # Column Non-Null Count Dtype \n",
"--- ------ -------------- ----- \n",
" 0 hgnc_id 1078 non-null object \n",
" 1 gene_symbol 1078 non-null object \n",
" 2 score 1078 non-null float64\n",
" 3 term 1078 non-null object \n",
" 4 rank 1078 non-null int64 \n",
"dtypes: float64(1), int64(1), object(3)\n",
"memory usage: 42.2+ KB\n"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"\n"
]
},
{
"data": {
"text/html": [
"<div>\n",
"<style scoped>\n",
" .dataframe tbody tr th:only-of-type {\n",
" vertical-align: middle;\n",
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" vertical-align: top;\n",
" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: right;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>hgnc_id</th>\n",
" <th>gene_symbol</th>\n",
" <th>score</th>\n",
" <th>term</th>\n",
" <th>rank</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>HGNC:5285</td>\n",
" <td>HTOR</td>\n",
" <td>186.95604</td>\n",
" <td>serotonin 5 receptor</td>\n",
" <td>0</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1</th>\n",
" <td>HGNC:16291</td>\n",
" <td>HTR5BP</td>\n",
" <td>105.24851</td>\n",
" <td>serotonin 5 receptor</td>\n",
" <td>1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>2</th>\n",
" <td>HGNC:5286</td>\n",
" <td>HTR1A</td>\n",
" <td>104.05976</td>\n",
" <td>serotonin 5 receptor</td>\n",
" <td>2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>3</th>\n",
" <td>HGNC:5287</td>\n",
" <td>HTR1B</td>\n",
" <td>104.05976</td>\n",
" <td>serotonin 5 receptor</td>\n",
" <td>3</td>\n",
" </tr>\n",
" <tr>\n",
" <th>4</th>\n",
" <td>HGNC:5289</td>\n",
" <td>HTR1D</td>\n",
" <td>104.05976</td>\n",
" <td>serotonin 5 receptor</td>\n",
" <td>4</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" hgnc_id gene_symbol score term rank\n",
"0 HGNC:5285 HTOR 186.95604 serotonin 5 receptor 0\n",
"1 HGNC:16291 HTR5BP 105.24851 serotonin 5 receptor 1\n",
"2 HGNC:5286 HTR1A 104.05976 serotonin 5 receptor 2\n",
"3 HGNC:5287 HTR1B 104.05976 serotonin 5 receptor 3\n",
"4 HGNC:5289 HTR1D 104.05976 serotonin 5 receptor 4"
]
},
"execution_count": 5,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"dfr = pd.concat([\n",
" get_hgnc_matches(t).assign(term=t).head(5).assign(rank=lambda df: np.arange(len(df)))\n",
" for t in tqdm.tqdm(df['term'].sample(random_state=0, n=500))\n",
"], ignore_index=True)\n",
"dfr.info()\n",
"dfr.head()"
]
},
{
"cell_type": "code",
"execution_count": 9,
"id": "42f2cf61",
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"0 235\n",
"1 221\n",
"2 213\n",
"3 206\n",
"4 203\n",
"Name: rank, dtype: int64"
]
},
"execution_count": 9,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"dfr['rank'].value_counts()"
]
},
{
"cell_type": "code",
"execution_count": 12,
"id": "2df86741",
"metadata": {},
"outputs": [
{
"data": {
"text/html": [
"<div>\n",
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" }\n",
"\n",
" .dataframe thead th {\n",
" text-align: right;\n",
" }\n",
"</style>\n",
"<table border=\"1\" class=\"dataframe\">\n",
" <thead>\n",
" <tr style=\"text-align: right;\">\n",
" <th></th>\n",
" <th>hgnc_id</th>\n",
" <th>gene_symbol</th>\n",
" <th>score</th>\n",
" <th>term</th>\n",
" </tr>\n",
" </thead>\n",
" <tbody>\n",
" <tr>\n",
" <th>505</th>\n",
" <td>HGNC:28372</td>\n",
" <td>PIP5K1P1</td>\n",
" <td>453.979300</td>\n",
" <td>1-phosphatidylinositol-4-phosphate 5-kinase activity proteins</td>\n",
" </tr>\n",
" <tr>\n",
" <th>261</th>\n",
" <td>HGNC:18917</td>\n",
" <td>KRTAP17-1</td>\n",
" <td>174.670670</td>\n",
" <td>17.1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1062</th>\n",
" <td>HGNC:44286</td>\n",
" <td>RNA28S1</td>\n",
" <td>175.471590</td>\n",
" <td>28S Ribosomal RNA</td>\n",
" </tr>\n",
" <tr>\n",
" <th>641</th>\n",
" <td>HGNC:24175</td>\n",
" <td>HACD3</td>\n",
" <td>526.172060</td>\n",
" <td>3-hydroxyacyl-CoA dehydrogenases</td>\n",
" </tr>\n",
" <tr>\n",
" <th>60</th>\n",
" <td>HGNC:5285</td>\n",
" <td>HTOR</td>\n",
" <td>141.573330</td>\n",
" <td>5-HT2B Serotonin Receptor</td>\n",
" </tr>\n",
" <tr>\n",
" <th>770</th>\n",
" <td>HGNC:14632</td>\n",
" <td>ADAMTSL1</td>\n",
" <td>123.713850</td>\n",
" <td>ADAMTS</td>\n",
" </tr>\n",
" <tr>\n",
" <th>700</th>\n",
" <td>HGNC:4574</td>\n",
" <td>GRIA4</td>\n",
" <td>392.381200</td>\n",
" <td>AMPA 4 glutamate receptor ionotropic</td>\n",
" </tr>\n",
" <tr>\n",
" <th>822</th>\n",
" <td>HGNC:93</td>\n",
" <td>ACAT1</td>\n",
" <td>16.205736</td>\n",
" <td>AN-1792</td>\n",
" </tr>\n",
" <tr>\n",
" <th>832</th>\n",
" <td>HGNC:2084</td>\n",
" <td>CLPP</td>\n",
" <td>311.254640</td>\n",
" <td>ATP-dependent Clp protease proteolytic subunit</td>\n",
" </tr>\n",
" <tr>\n",
" <th>433</th>\n",
" <td>HGNC:24298</td>\n",
" <td>PFN1P2</td>\n",
" <td>138.272190</td>\n",
" <td>Acanthamoeba castellanii Profilin-2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>224</th>\n",
" <td>HGNC:80</td>\n",
" <td>AOC1</td>\n",
" <td>152.958370</td>\n",
" <td>Alcaligenes faecalis Copper-containing nitrite reductase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>271</th>\n",
" <td>HGNC:2666</td>\n",
" <td>DAG1</td>\n",
" <td>231.511500</td>\n",
" <td>Alpha-dystroglycan</td>\n",
" </tr>\n",
" <tr>\n",
" <th>378</th>\n",
" <td>HGNC:17379</td>\n",
" <td>APBB1IP</td>\n",
" <td>130.228650</td>\n",
" <td>Amyloid protein AA2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>601</th>\n",
" <td>HGNC:12790</td>\n",
" <td>GET1</td>\n",
" <td>116.201260</td>\n",
" <td>Angiogenic Proteins</td>\n",
" </tr>\n",
" <tr>\n",
" <th>710</th>\n",
" <td>HGNC:19006</td>\n",
" <td>HIPK1</td>\n",
" <td>137.506840</td>\n",
" <td>Antennapedia Homeodomain Protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>495</th>\n",
" <td>HGNC:38276</td>\n",
" <td>MIR4304</td>\n",
" <td>141.573330</td>\n",
" <td>Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) Proteasome-activating nucleotidase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>209</th>\n",
" <td>HGNC:18356</td>\n",
" <td>ACER1</td>\n",
" <td>136.772780</td>\n",
" <td>Aspergillus flavus Alkaline protease 1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>428</th>\n",
" <td>HGNC:1064</td>\n",
" <td>BLYM</td>\n",
" <td>232.555680</td>\n",
" <td>Avian infectious bronchitis virus (strain M41) Spike glycoprotein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>291</th>\n",
" <td>HGNC:993</td>\n",
" <td>BCL2L10</td>\n",
" <td>198.737920</td>\n",
" <td>BCL2-like 10 protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>436</th>\n",
" <td>HGNC:4795</td>\n",
" <td>H6PD</td>\n",
" <td>80.768394</td>\n",
" <td>Bacillus cereus Leucine dehydrogenase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>461</th>\n",
" <td>HGNC:9479</td>\n",
" <td>LONP1</td>\n",
" <td>144.285370</td>\n",
" <td>Bacillus subtilis (strain 168) Lon protease 1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>343</th>\n",
" <td>HGNC:28372</td>\n",
" <td>PIP5K1P1</td>\n",
" <td>112.841194</td>\n",
" <td>Bacillus thuringiensis 1-phosphatidylinositol phosphodiesterase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>510</th>\n",
" <td>HGNC:20363</td>\n",
" <td>AREL1</td>\n",
" <td>81.628970</td>\n",
" <td>Biotin-protein ligase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>760</th>\n",
" <td>HGNC:7849</td>\n",
" <td>NME1</td>\n",
" <td>273.430240</td>\n",
" <td>Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264) Nucleoside diphosphate kinase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>109</th>\n",
" <td>HGNC:2561</td>\n",
" <td>CXCR4</td>\n",
" <td>530.141900</td>\n",
" <td>C-X-C chemokine receptors type 4</td>\n",
" </tr>\n",
" <tr>\n",
" <th>606</th>\n",
" <td>HGNC:24462</td>\n",
" <td>CLECL1</td>\n",
" <td>866.798700</td>\n",
" <td>C-type lectin-like</td>\n",
" </tr>\n",
" <tr>\n",
" <th>917</th>\n",
" <td>HGNC:29859</td>\n",
" <td>ABI3</td>\n",
" <td>33.832092</td>\n",
" <td>CD-NTase family</td>\n",
" </tr>\n",
" <tr>\n",
" <th>591</th>\n",
" <td>HGNC:1645</td>\n",
" <td>CD24</td>\n",
" <td>215.258670</td>\n",
" <td>CD24 Antigen</td>\n",
" </tr>\n",
" <tr>\n",
" <th>129</th>\n",
" <td>HGNC:9535</td>\n",
" <td>PSMA6</td>\n",
" <td>23.745762</td>\n",
" <td>CDKC-1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>373</th>\n",
" <td>HGNC:29859</td>\n",
" <td>ABI3</td>\n",
" <td>33.832092</td>\n",
" <td>CDP-glycerol glycerophosphotransferase family</td>\n",
" </tr>\n",
" <tr>\n",
" <th>902</th>\n",
" <td>HGNC:23364</td>\n",
" <td>ST6GALNAC6</td>\n",
" <td>361.511750</td>\n",
" <td>CMP-N-acetylneuraminate-alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>196</th>\n",
" <td>HGNC:10491</td>\n",
" <td>S100A11P1</td>\n",
" <td>176.073500</td>\n",
" <td>Calcium-Binding Proteins</td>\n",
" </tr>\n",
" <tr>\n",
" <th>765</th>\n",
" <td>HGNC:9954</td>\n",
" <td>REL</td>\n",
" <td>490.675050</td>\n",
" <td>Canonical NF-KB pathway</td>\n",
" </tr>\n",
" <tr>\n",
" <th>980</th>\n",
" <td>HGNC:19650</td>\n",
" <td>CHST10</td>\n",
" <td>167.412110</td>\n",
" <td>Carbohydrate binding module family 10</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1009</th>\n",
" <td>HGNC:4069</td>\n",
" <td>GABARAPL3</td>\n",
" <td>85.519610</td>\n",
" <td>Catecholamine Receptors</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1067</th>\n",
" <td>HGNC:255</td>\n",
" <td>ADH6</td>\n",
" <td>87.527880</td>\n",
" <td>Cohn fraction V</td>\n",
" </tr>\n",
" <tr>\n",
" <th>731</th>\n",
" <td>HGNC:2334</td>\n",
" <td>CR1</td>\n",
" <td>228.922680</td>\n",
" <td>Complement C3b Inactivator Proteins</td>\n",
" </tr>\n",
" <tr>\n",
" <th>950</th>\n",
" <td>HGNC:421</td>\n",
" <td>ALDRL2</td>\n",
" <td>91.778630</td>\n",
" <td>Cortisone Reductase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>995</th>\n",
" <td>HGNC:1585</td>\n",
" <td>CCND3</td>\n",
" <td>108.612724</td>\n",
" <td>D3 peptide</td>\n",
" </tr>\n",
" <tr>\n",
" <th>307</th>\n",
" <td>HGNC:28808</td>\n",
" <td>AP1AR</td>\n",
" <td>25.254301</td>\n",
" <td>DEFB4A protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>716</th>\n",
" <td>HGNC:7976</td>\n",
" <td>NR2F2</td>\n",
" <td>206.061650</td>\n",
" <td>Dermatophagoides farinae Mite group 2 allergen Der f 2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>5</th>\n",
" <td>HGNC:14784</td>\n",
" <td>OR5P3</td>\n",
" <td>126.588005</td>\n",
" <td>Dermatophagoides pteronyssinus antigen p 3</td>\n",
" </tr>\n",
" <tr>\n",
" <th>245</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 1.14.14.88</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1052</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 1.2.3.4</td>\n",
" </tr>\n",
" <tr>\n",
" <th>751</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 1.21.99.4</td>\n",
" </tr>\n",
" <tr>\n",
" <th>626</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 1.4.1.5</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1072</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 1.4.3.16</td>\n",
" </tr>\n",
" <tr>\n",
" <th>970</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 1.4.3.3</td>\n",
" </tr>\n",
" <tr>\n",
" <th>922</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 1.5.3.7</td>\n",
" </tr>\n",
" <tr>\n",
" <th>752</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 1.8.1.19</td>\n",
" </tr>\n",
" <tr>\n",
" <th>389</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 2.3.1.3</td>\n",
" </tr>\n",
" <tr>\n",
" <th>41</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 2.3.3.13</td>\n",
" </tr>\n",
" <tr>\n",
" <th>234</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 2.4.1.88</td>\n",
" </tr>\n",
" <tr>\n",
" <th>715</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 2.6.1.72</td>\n",
" </tr>\n",
" <tr>\n",
" <th>565</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 2.7.11.19</td>\n",
" </tr>\n",
" <tr>\n",
" <th>897</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 3.3.2.1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>82</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 3.5.1.41</td>\n",
" </tr>\n",
" <tr>\n",
" <th>842</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 4.1.1.83</td>\n",
" </tr>\n",
" <tr>\n",
" <th>15</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 4.1.2.22</td>\n",
" </tr>\n",
" <tr>\n",
" <th>312</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 4.2.1.82</td>\n",
" </tr>\n",
" <tr>\n",
" <th>383</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 4.2.3.73</td>\n",
" </tr>\n",
" <tr>\n",
" <th>466</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 4.2.3.86</td>\n",
" </tr>\n",
" <tr>\n",
" <th>885</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 5.1.2.3</td>\n",
" </tr>\n",
" <tr>\n",
" <th>201</th>\n",
" <td>HGNC:11754</td>\n",
" <td>TFEC</td>\n",
" <td>141.573330</td>\n",
" <td>EC 6.3.2.12</td>\n",
" </tr>\n",
" <tr>\n",
" <th>408</th>\n",
" <td>HGNC:27029</td>\n",
" <td>ATPSCKMT</td>\n",
" <td>143.365660</td>\n",
" <td>Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) Isopenicillin N synthase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>358</th>\n",
" <td>HGNC:3129</td>\n",
" <td>EBI3</td>\n",
" <td>543.000000</td>\n",
" <td>Epstein-Barr viral capsid antigen</td>\n",
" </tr>\n",
" <tr>\n",
" <th>560</th>\n",
" <td>HGNC:6209</td>\n",
" <td>K12T</td>\n",
" <td>141.573330</td>\n",
" <td>Escherichia coli (strain K12) 2-dehydropantoate 2-reductase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>266</th>\n",
" <td>HGNC:14487</td>\n",
" <td>MRPL33</td>\n",
" <td>200.982820</td>\n",
" <td>Escherichia coli (strain K12) 50S ribosomal protein L33</td>\n",
" </tr>\n",
" <tr>\n",
" <th>545</th>\n",
" <td>HGNC:28272</td>\n",
" <td>CENPBD1P</td>\n",
" <td>387.675400</td>\n",
" <td>Escherichia coli (strain K12) DNA-binding transcriptional dual regulator ModE</td>\n",
" </tr>\n",
" <tr>\n",
" <th>16</th>\n",
" <td>HGNC:6209</td>\n",
" <td>K12T</td>\n",
" <td>141.573330</td>\n",
" <td>Escherichia coli (strain K12) Multidrug efflux pump subunit AcrB</td>\n",
" </tr>\n",
" <tr>\n",
" <th>171</th>\n",
" <td>HGNC:6209</td>\n",
" <td>K12T</td>\n",
" <td>141.573330</td>\n",
" <td>Escherichia coli (strain K12) PEP-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL</td>\n",
" </tr>\n",
" <tr>\n",
" <th>912</th>\n",
" <td>HGNC:6209</td>\n",
" <td>K12T</td>\n",
" <td>141.573330</td>\n",
" <td>Escherichia coli (strain K12) Protein translocase subunit SecE</td>\n",
" </tr>\n",
" <tr>\n",
" <th>36</th>\n",
" <td>HGNC:6209</td>\n",
" <td>K12T</td>\n",
" <td>141.573330</td>\n",
" <td>Escherichia coli (strain K12) Thymidylate synthase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>515</th>\n",
" <td>HGNC:11758</td>\n",
" <td>TFG</td>\n",
" <td>141.573330</td>\n",
" <td>Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) Lysis protein S homolog from lambdoid prophage DLP12</td>\n",
" </tr>\n",
" <tr>\n",
" <th>746</th>\n",
" <td>HGNC:3959</td>\n",
" <td>FRZB</td>\n",
" <td>107.803925</td>\n",
" <td>Frizzled receptors</td>\n",
" </tr>\n",
" <tr>\n",
" <th>348</th>\n",
" <td>HGNC:3825</td>\n",
" <td>FPGT</td>\n",
" <td>126.472210</td>\n",
" <td>GTP-RNA guanylyltransferase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>240</th>\n",
" <td>HGNC:4114</td>\n",
" <td>GAL</td>\n",
" <td>123.713850</td>\n",
" <td>Galanin</td>\n",
" </tr>\n",
" <tr>\n",
" <th>661</th>\n",
" <td>HGNC:4375</td>\n",
" <td>GML</td>\n",
" <td>116.201260</td>\n",
" <td>Glycosylphosphatidylinositol Diacylglycerol-Lyase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>621</th>\n",
" <td>HGNC:3638</td>\n",
" <td>FDX1</td>\n",
" <td>121.417590</td>\n",
" <td>Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) Ferredoxin</td>\n",
" </tr>\n",
" <tr>\n",
" <th>323</th>\n",
" <td>HGNC:29227</td>\n",
" <td>HEG1</td>\n",
" <td>482.595500</td>\n",
" <td>Heart Development</td>\n",
" </tr>\n",
" <tr>\n",
" <th>566</th>\n",
" <td>HGNC:4920</td>\n",
" <td>HIVEP1</td>\n",
" <td>206.318740</td>\n",
" <td>Human Immunodeficiency Virus-1 rev protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1027</th>\n",
" <td>HGNC:4920</td>\n",
" <td>HIVEP1</td>\n",
" <td>206.318740</td>\n",
" <td>Human immunodeficiency virus 1 gp41 protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1057</th>\n",
" <td>HGNC:15781</td>\n",
" <td>CHRFAM7A</td>\n",
" <td>158.503720</td>\n",
" <td>Human respiratory syncytial virus A (strain A2) Fusion glycoprotein F0</td>\n",
" </tr>\n",
" <tr>\n",
" <th>467</th>\n",
" <td>HGNC:28808</td>\n",
" <td>AP1AR</td>\n",
" <td>25.254301</td>\n",
" <td>IFNA1 protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>827</th>\n",
" <td>HGNC:586</td>\n",
" <td>APEH</td>\n",
" <td>95.934670</td>\n",
" <td>INGAP peptide</td>\n",
" </tr>\n",
" <tr>\n",
" <th>535</th>\n",
" <td>HGNC:42786</td>\n",
" <td>LINC00449</td>\n",
" <td>123.713850</td>\n",
" <td>JMV 449</td>\n",
" </tr>\n",
" <tr>\n",
" <th>151</th>\n",
" <td>HGNC:16011</td>\n",
" <td>ASB1</td>\n",
" <td>51.808920</td>\n",
" <td>Krueppel-associated box</td>\n",
" </tr>\n",
" <tr>\n",
" <th>67</th>\n",
" <td>HGNC:12441</td>\n",
" <td>TYMS</td>\n",
" <td>129.926680</td>\n",
" <td>Lactobacillus casei Thymidylate synthase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>276</th>\n",
" <td>HGNC:4823</td>\n",
" <td>HBA1</td>\n",
" <td>153.791660</td>\n",
" <td>Macropus eugenii Hemoglobin subunit omega</td>\n",
" </tr>\n",
" <tr>\n",
" <th>104</th>\n",
" <td>HGNC:7103</td>\n",
" <td>MIP</td>\n",
" <td>477.520260</td>\n",
" <td>Major intrinsic protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>525</th>\n",
" <td>HGNC:7985</td>\n",
" <td>NR6A1</td>\n",
" <td>346.633300</td>\n",
" <td>Member 1 Group A Nuclear Receptor Subfamily 6</td>\n",
" </tr>\n",
" <tr>\n",
" <th>176</th>\n",
" <td>HGNC:9265</td>\n",
" <td>PPIAP12</td>\n",
" <td>63.450413</td>\n",
" <td>Metamorphosin A</td>\n",
" </tr>\n",
" <tr>\n",
" <th>204</th>\n",
" <td>HGNC:820</td>\n",
" <td>ATP4B</td>\n",
" <td>165.872700</td>\n",
" <td>Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) Prefoldin subunit beta</td>\n",
" </tr>\n",
" <tr>\n",
" <th>93</th>\n",
" <td>HGNC:28171</td>\n",
" <td>HDHD3</td>\n",
" <td>166.426670</td>\n",
" <td>Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) Haloalkane dehalogenase 3</td>\n",
" </tr>\n",
" <tr>\n",
" <th>790</th>\n",
" <td>HGNC:7455</td>\n",
" <td>MT-ND1</td>\n",
" <td>811.848140</td>\n",
" <td>NADH:ubiquinone oxidoreductase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>313</th>\n",
" <td>HGNC:29</td>\n",
" <td>ABCA1</td>\n",
" <td>48.321808</td>\n",
" <td>NR3 subfamily</td>\n",
" </tr>\n",
" <tr>\n",
" <th>810</th>\n",
" <td>HGNC:102</td>\n",
" <td>CNNM1</td>\n",
" <td>126.472210</td>\n",
" <td>Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) Probable beta-glucosidase A</td>\n",
" </tr>\n",
" <tr>\n",
" <th>119</th>\n",
" <td>HGNC:102</td>\n",
" <td>CNNM1</td>\n",
" <td>126.472210</td>\n",
" <td>Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) Probable endo-beta-1,4-glucanase D</td>\n",
" </tr>\n",
" <tr>\n",
" <th>843</th>\n",
" <td>HGNC:4069</td>\n",
" <td>GABARAPL3</td>\n",
" <td>85.519610</td>\n",
" <td>Neurokinin receptors</td>\n",
" </tr>\n",
" <tr>\n",
" <th>925</th>\n",
" <td>HGNC:9658</td>\n",
" <td>PTPN6</td>\n",
" <td>559.188540</td>\n",
" <td>Non-Receptor Type 6 Protein Tyrosine Phosphatase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>451</th>\n",
" <td>HGNC:3609</td>\n",
" <td>FCER1A</td>\n",
" <td>126.472210</td>\n",
" <td>ORF Ia</td>\n",
" </tr>\n",
" <tr>\n",
" <th>631</th>\n",
" <td>HGNC:4828</td>\n",
" <td>HBBP1</td>\n",
" <td>230.725160</td>\n",
" <td>Oncorhynchus mykiss Hemoglobin subunit beta-1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>328</th>\n",
" <td>HGNC:17911</td>\n",
" <td>ALKBH1</td>\n",
" <td>167.914860</td>\n",
" <td>Oncorhynchus mykiss Histone H2A</td>\n",
" </tr>\n",
" <tr>\n",
" <th>246</th>\n",
" <td>HGNC:4827</td>\n",
" <td>HBB</td>\n",
" <td>210.153630</td>\n",
" <td>Ovis aries musimon Hemoglobin subunit beta</td>\n",
" </tr>\n",
" <tr>\n",
" <th>423</th>\n",
" <td>HGNC:8986</td>\n",
" <td>PIM1</td>\n",
" <td>129.926680</td>\n",
" <td>PIM family</td>\n",
" </tr>\n",
" <tr>\n",
" <th>156</th>\n",
" <td>HGNC:3450</td>\n",
" <td>ERPL1</td>\n",
" <td>134.551700</td>\n",
" <td>POL</td>\n",
" </tr>\n",
" <tr>\n",
" <th>286</th>\n",
" <td>HGNC:20363</td>\n",
" <td>AREL1</td>\n",
" <td>81.628970</td>\n",
" <td>Pantoate-beta-alanine ligase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>935</th>\n",
" <td>HGNC:9495</td>\n",
" <td>PRTN3</td>\n",
" <td>141.573330</td>\n",
" <td>Parengyodontium album Proteinase K</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1042</th>\n",
" <td>HGNC:21204</td>\n",
" <td>IPCEF1</td>\n",
" <td>134.551700</td>\n",
" <td>Peptide Initiation Factors</td>\n",
" </tr>\n",
" <tr>\n",
" <th>124</th>\n",
" <td>HGNC:21715</td>\n",
" <td>PKD1L2</td>\n",
" <td>407.111880</td>\n",
" <td>Polycystic Kidney Disease 1-Like</td>\n",
" </tr>\n",
" <tr>\n",
" <th>805</th>\n",
" <td>HGNC:18731</td>\n",
" <td>PDCD1LG2</td>\n",
" <td>399.105830</td>\n",
" <td>Programmed Cell Death 1 Ligand 2 Protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>31</th>\n",
" <td>HGNC:395</td>\n",
" <td>ALAD</td>\n",
" <td>110.388820</td>\n",
" <td>Propanediol Dehydratase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>800</th>\n",
" <td>HGNC:28808</td>\n",
" <td>AP1AR</td>\n",
" <td>25.254301</td>\n",
" <td>Protein FAM49B</td>\n",
" </tr>\n",
" <tr>\n",
" <th>166</th>\n",
" <td>HGNC:28628</td>\n",
" <td>NOPCHAP1</td>\n",
" <td>120.183840</td>\n",
" <td>Proteus mirabilis (strain HI4320) Chaperone protein PmfD</td>\n",
" </tr>\n",
" <tr>\n",
" <th>853</th>\n",
" <td>HGNC:42678</td>\n",
" <td>LINC00358</td>\n",
" <td>123.713850</td>\n",
" <td>Pseudomonas putida Ferric-pseudobactin 358 receptor</td>\n",
" </tr>\n",
" <tr>\n",
" <th>550</th>\n",
" <td>HGNC:18388</td>\n",
" <td>SFTPI</td>\n",
" <td>185.208620</td>\n",
" <td>Pulmonary Surfactant-Associated Protein A</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1000</th>\n",
" <td>HGNC:8539</td>\n",
" <td>P2RY1</td>\n",
" <td>251.962160</td>\n",
" <td>Purinergic P2Y1 Receptors</td>\n",
" </tr>\n",
" <tr>\n",
" <th>611</th>\n",
" <td>HGNC:24434</td>\n",
" <td>GLYR1</td>\n",
" <td>203.900420</td>\n",
" <td>Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) Glyoxylate reductase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>990</th>\n",
" <td>HGNC:586</td>\n",
" <td>APEH</td>\n",
" <td>95.934670</td>\n",
" <td>RVF peptide</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1032</th>\n",
" <td>HGNC:1933</td>\n",
" <td>CHI3L2</td>\n",
" <td>147.389590</td>\n",
" <td>Rhizopus oligosporus Chitinase 2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>114</th>\n",
" <td>HGNC:11314</td>\n",
" <td>SSAV1</td>\n",
" <td>241.100660</td>\n",
" <td>Rous sarcoma virus protease</td>\n",
" </tr>\n",
" <tr>\n",
" <th>576</th>\n",
" <td>HGNC:35454</td>\n",
" <td>ECSCR</td>\n",
" <td>141.573330</td>\n",
" <td>Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) Chemotaxis protein CheY</td>\n",
" </tr>\n",
" <tr>\n",
" <th>251</th>\n",
" <td>HGNC:395</td>\n",
" <td>ALAD</td>\n",
" <td>110.388820</td>\n",
" <td>Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) L-rhamnonate dehydratase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>755</th>\n",
" <td>HGNC:32555</td>\n",
" <td>SCARNA1</td>\n",
" <td>520.596200</td>\n",
" <td>Small Cajal body-specific RNA</td>\n",
" </tr>\n",
" <tr>\n",
" <th>10</th>\n",
" <td>HGNC:11001</td>\n",
" <td>SLC28A1</td>\n",
" <td>141.114090</td>\n",
" <td>Sodium-Coupled Vitamin C Transporters</td>\n",
" </tr>\n",
" <tr>\n",
" <th>219</th>\n",
" <td>HGNC:11386</td>\n",
" <td>STIM1</td>\n",
" <td>572.798000</td>\n",
" <td>Stromal interaction molecule</td>\n",
" </tr>\n",
" <tr>\n",
" <th>214</th>\n",
" <td>HGNC:586</td>\n",
" <td>APEH</td>\n",
" <td>95.934670</td>\n",
" <td>TAT-BH4 peptide</td>\n",
" </tr>\n",
" <tr>\n",
" <th>384</th>\n",
" <td>HGNC:29859</td>\n",
" <td>ABI3</td>\n",
" <td>33.832092</td>\n",
" <td>TFE family</td>\n",
" </tr>\n",
" <tr>\n",
" <th>484</th>\n",
" <td>HGNC:12790</td>\n",
" <td>GET1</td>\n",
" <td>116.201260</td>\n",
" <td>Tacrolimus Binding Proteins</td>\n",
" </tr>\n",
" <tr>\n",
" <th>72</th>\n",
" <td>HGNC:7393</td>\n",
" <td>MT1A</td>\n",
" <td>103.751720</td>\n",
" <td>Tetrahymena thermophila Cadmium metallothionein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1073</th>\n",
" <td>HGNC:20657</td>\n",
" <td>TSPAN1</td>\n",
" <td>104.349450</td>\n",
" <td>Tetraspanin</td>\n",
" </tr>\n",
" <tr>\n",
" <th>975</th>\n",
" <td>HGNC:1915</td>\n",
" <td>CHD1</td>\n",
" <td>98.907234</td>\n",
" <td>Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) DNA integrity scanning protein DisA</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1047</th>\n",
" <td>HGNC:11881</td>\n",
" <td>TMSB4X</td>\n",
" <td>119.450580</td>\n",
" <td>Thymosin alpha-1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>77</th>\n",
" <td>HGNC:34804</td>\n",
" <td>TRNAC17</td>\n",
" <td>115.244934</td>\n",
" <td>Tyr Transfer RNA</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1037</th>\n",
" <td>HGNC:19431</td>\n",
" <td>CNIH1</td>\n",
" <td>73.076780</td>\n",
" <td>VEGF receptor family</td>\n",
" </tr>\n",
" <tr>\n",
" <th>520</th>\n",
" <td>HGNC:12828</td>\n",
" <td>XRCC1</td>\n",
" <td>728.652830</td>\n",
" <td>X-ray Repair Cross Complementing Protein 1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>651</th>\n",
" <td>HGNC:2590</td>\n",
" <td>CYP11A1</td>\n",
" <td>221.391310</td>\n",
" <td>XI-A</td>\n",
" </tr>\n",
" <tr>\n",
" <th>131</th>\n",
" <td>HGNC:12845</td>\n",
" <td>YPEL1</td>\n",
" <td>123.713850</td>\n",
" <td>Yippee</td>\n",
" </tr>\n",
" <tr>\n",
" <th>741</th>\n",
" <td>HGNC:17389</td>\n",
" <td>SMPDL3A</td>\n",
" <td>274.504200</td>\n",
" <td>acid sphingomyelin phosphodiesterase activity proteins</td>\n",
" </tr>\n",
" <tr>\n",
" <th>103</th>\n",
" <td>HGNC:9544</td>\n",
" <td>PSMB7</td>\n",
" <td>25.714252</td>\n",
" <td>acl-2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>181</th>\n",
" <td>HGNC:87</td>\n",
" <td>ACAD8</td>\n",
" <td>352.918370</td>\n",
" <td>acyl-CoA transferase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>26</th>\n",
" <td>HGNC:9173</td>\n",
" <td>POLA1</td>\n",
" <td>257.254880</td>\n",
" <td>alpha subunit DNA polymerase III</td>\n",
" </tr>\n",
" <tr>\n",
" <th>930</th>\n",
" <td>HGNC:9530</td>\n",
" <td>PSMA1</td>\n",
" <td>20.707401</td>\n",
" <td>alpha-maltosidase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>456</th>\n",
" <td>HGNC:12383</td>\n",
" <td>EIPR1</td>\n",
" <td>67.255330</td>\n",
" <td>anti-inhibitor coagulant complex</td>\n",
" </tr>\n",
" <tr>\n",
" <th>394</th>\n",
" <td>HGNC:10008</td>\n",
" <td>RHCE</td>\n",
" <td>134.551700</td>\n",
" <td>antigens</td>\n",
" </tr>\n",
" <tr>\n",
" <th>880</th>\n",
" <td>HGNC:69</td>\n",
" <td>ABCE1</td>\n",
" <td>69.619480</td>\n",
" <td>apratoxin E</td>\n",
" </tr>\n",
" <tr>\n",
" <th>186</th>\n",
" <td>HGNC:741</td>\n",
" <td>ASD1</td>\n",
" <td>141.573330</td>\n",
" <td>atrial natriuretic factor prohormone (103-125)</td>\n",
" </tr>\n",
" <tr>\n",
" <th>817</th>\n",
" <td>HGNC:30743</td>\n",
" <td>TSLP</td>\n",
" <td>141.573330</td>\n",
" <td>avian thymic hormone</td>\n",
" </tr>\n",
" <tr>\n",
" <th>479</th>\n",
" <td>HGNC:15864</td>\n",
" <td>RBCK1</td>\n",
" <td>88.616700</td>\n",
" <td>bovine herpesvirus type-1 glycoproteins</td>\n",
" </tr>\n",
" <tr>\n",
" <th>726</th>\n",
" <td>HGNC:2727</td>\n",
" <td>DDO</td>\n",
" <td>497.751300</td>\n",
" <td>c. elegans D-aspartate oxidase 3</td>\n",
" </tr>\n",
" <tr>\n",
" <th>256</th>\n",
" <td>HGNC:2345</td>\n",
" <td>CREB1</td>\n",
" <td>242.835900</td>\n",
" <td>cAMP response element binding proteins</td>\n",
" </tr>\n",
" <tr>\n",
" <th>960</th>\n",
" <td>HGNC:9251</td>\n",
" <td>CTSA</td>\n",
" <td>104.349450</td>\n",
" <td>cathepsin Q</td>\n",
" </tr>\n",
" <tr>\n",
" <th>21</th>\n",
" <td>HGNC:1907</td>\n",
" <td>CH25H</td>\n",
" <td>117.730130</td>\n",
" <td>cholesterol dehydrogenase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>815</th>\n",
" <td>HGNC:9530</td>\n",
" <td>PSMA1</td>\n",
" <td>23.745762</td>\n",
" <td>con-6</td>\n",
" </tr>\n",
" <tr>\n",
" <th>141</th>\n",
" <td>HGNC:14344</td>\n",
" <td>C1QTNF5</td>\n",
" <td>11.926088</td>\n",
" <td>ctdspl2-a</td>\n",
" </tr>\n",
" <tr>\n",
" <th>646</th>\n",
" <td>HGNC:31113</td>\n",
" <td>RAC1P4</td>\n",
" <td>58.213450</td>\n",
" <td>cyanobacterial toxin</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1012</th>\n",
" <td>HGNC:1577</td>\n",
" <td>CCNA1</td>\n",
" <td>82.105050</td>\n",
" <td>cyclin X</td>\n",
" </tr>\n",
" <tr>\n",
" <th>555</th>\n",
" <td>HGNC:568</td>\n",
" <td>AP3D1</td>\n",
" <td>106.075080</td>\n",
" <td>delta protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>907</th>\n",
" <td>HGNC:2</td>\n",
" <td>A12M2</td>\n",
" <td>235.417340</td>\n",
" <td>deltorphin II, Ala(2)-</td>\n",
" </tr>\n",
" <tr>\n",
" <th>318</th>\n",
" <td>HGNC:16709</td>\n",
" <td>CALCRL</td>\n",
" <td>46.518234</td>\n",
" <td>ecdysone receptor</td>\n",
" </tr>\n",
" <tr>\n",
" <th>868</th>\n",
" <td>HGNC:587</td>\n",
" <td>APEX1</td>\n",
" <td>134.551700</td>\n",
" <td>endodeoxyribonuclease BsmBI</td>\n",
" </tr>\n",
" <tr>\n",
" <th>676</th>\n",
" <td>HGNC:18149</td>\n",
" <td>A4GALT</td>\n",
" <td>90.088010</td>\n",
" <td>enterocin P</td>\n",
" </tr>\n",
" <tr>\n",
" <th>686</th>\n",
" <td>HGNC:3519</td>\n",
" <td>EYA1</td>\n",
" <td>126.472210</td>\n",
" <td>eya</td>\n",
" </tr>\n",
" <tr>\n",
" <th>540</th>\n",
" <td>HGNC:4795</td>\n",
" <td>H6PD</td>\n",
" <td>205.838180</td>\n",
" <td>glucose-1-phosphate thymidylyltransferase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>721</th>\n",
" <td>HGNC:24862</td>\n",
" <td>MOGS</td>\n",
" <td>166.016850</td>\n",
" <td>glucosidase I</td>\n",
" </tr>\n",
" <tr>\n",
" <th>666</th>\n",
" <td>HGNC:11850</td>\n",
" <td>TLR4</td>\n",
" <td>232.904710</td>\n",
" <td>gorilla Toll-like receptor 4</td>\n",
" </tr>\n",
" <tr>\n",
" <th>985</th>\n",
" <td>HGNC:24854</td>\n",
" <td>STBD1</td>\n",
" <td>141.573330</td>\n",
" <td>granule-bound starch synthase I</td>\n",
" </tr>\n",
" <tr>\n",
" <th>690</th>\n",
" <td>HGNC:18075</td>\n",
" <td>AHSP</td>\n",
" <td>109.472110</td>\n",
" <td>hemoglobin Portland</td>\n",
" </tr>\n",
" <tr>\n",
" <th>413</th>\n",
" <td>HGNC:3059</td>\n",
" <td>HBEGF</td>\n",
" <td>129.926680</td>\n",
" <td>heparin proteoglycan</td>\n",
" </tr>\n",
" <tr>\n",
" <th>191</th>\n",
" <td>HGNC:24945</td>\n",
" <td>GPIHBP1</td>\n",
" <td>293.912930</td>\n",
" <td>high density lipoprotein receptors</td>\n",
" </tr>\n",
" <tr>\n",
" <th>403</th>\n",
" <td>HGNC:146</td>\n",
" <td>ACTG1P1</td>\n",
" <td>103.075200</td>\n",
" <td>horse Actin, cytoplasmic 1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>45</th>\n",
" <td>HGNC:6535</td>\n",
" <td>LDHA</td>\n",
" <td>173.768550</td>\n",
" <td>lactate dehydrogenase C4</td>\n",
" </tr>\n",
" <tr>\n",
" <th>863</th>\n",
" <td>HGNC:39817</td>\n",
" <td>LINC00481</td>\n",
" <td>126.472210</td>\n",
" <td>lacticin 481</td>\n",
" </tr>\n",
" <tr>\n",
" <th>136</th>\n",
" <td>HGNC:252</td>\n",
" <td>ADH4</td>\n",
" <td>81.282410</td>\n",
" <td>leghemoglobin II</td>\n",
" </tr>\n",
" <tr>\n",
" <th>780</th>\n",
" <td>HGNC:14344</td>\n",
" <td>C1QTNF5</td>\n",
" <td>11.926088</td>\n",
" <td>lmo4-a</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1017</th>\n",
" <td>HGNC:18714</td>\n",
" <td>DCP1A</td>\n",
" <td>205.289750</td>\n",
" <td>mRNA decapping enzymes</td>\n",
" </tr>\n",
" <tr>\n",
" <th>586</th>\n",
" <td>HGNC:2728</td>\n",
" <td>DDOST</td>\n",
" <td>109.472110</td>\n",
" <td>macrolide glycosyltransferase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>489</th>\n",
" <td>HGNC:14344</td>\n",
" <td>C1QTNF5</td>\n",
" <td>11.926088</td>\n",
" <td>mecom-a</td>\n",
" </tr>\n",
" <tr>\n",
" <th>229</th>\n",
" <td>HGNC:1984</td>\n",
" <td>CISH</td>\n",
" <td>189.992280</td>\n",
" <td>member 1 small inducible cytokine subfamily E</td>\n",
" </tr>\n",
" <tr>\n",
" <th>736</th>\n",
" <td>HGNC:4795</td>\n",
" <td>H6PD</td>\n",
" <td>80.768394</td>\n",
" <td>meso-tartrate dehydrogenase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>858</th>\n",
" <td>HGNC:4593</td>\n",
" <td>GRM1</td>\n",
" <td>245.240890</td>\n",
" <td>metabotropic glutamate receptor 4b</td>\n",
" </tr>\n",
" <tr>\n",
" <th>299</th>\n",
" <td>HGNC:9031</td>\n",
" <td>PLA2G2A</td>\n",
" <td>69.941270</td>\n",
" <td>modified fluid gelatins</td>\n",
" </tr>\n",
" <tr>\n",
" <th>656</th>\n",
" <td>HGNC:13916</td>\n",
" <td>APOM</td>\n",
" <td>181.136000</td>\n",
" <td>mouse Apolipoprotein M</td>\n",
" </tr>\n",
" <tr>\n",
" <th>530</th>\n",
" <td>HGNC:2432</td>\n",
" <td>CSF1</td>\n",
" <td>269.673160</td>\n",
" <td>mouse Granulocyte colony-stimulating factor</td>\n",
" </tr>\n",
" <tr>\n",
" <th>775</th>\n",
" <td>HGNC:24542</td>\n",
" <td>DPCD</td>\n",
" <td>129.926680</td>\n",
" <td>mouse HCCR1 protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>945</th>\n",
" <td>HGNC:6174</td>\n",
" <td>ITM2B</td>\n",
" <td>263.222470</td>\n",
" <td>mouse Integral membrane protein 2B</td>\n",
" </tr>\n",
" <tr>\n",
" <th>146</th>\n",
" <td>HGNC:49430</td>\n",
" <td>YWHAEP3</td>\n",
" <td>161.898220</td>\n",
" <td>mouse Lymphocyte activation gene 3 protein</td>\n",
" </tr>\n",
" <tr>\n",
" <th>837</th>\n",
" <td>HGNC:24862</td>\n",
" <td>MOGS</td>\n",
" <td>546.137600</td>\n",
" <td>mouse Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB</td>\n",
" </tr>\n",
" <tr>\n",
" <th>848</th>\n",
" <td>HGNC:17644</td>\n",
" <td>PIWIL2</td>\n",
" <td>214.691820</td>\n",
" <td>mouse Piwi-like protein 2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>88</th>\n",
" <td>HGNC:19318</td>\n",
" <td>P3H3</td>\n",
" <td>408.603270</td>\n",
" <td>mouse Prolyl 3-hydroxylase 3</td>\n",
" </tr>\n",
" <tr>\n",
" <th>446</th>\n",
" <td>HGNC:8864</td>\n",
" <td>CFP</td>\n",
" <td>141.573330</td>\n",
" <td>mouse Properdin</td>\n",
" </tr>\n",
" <tr>\n",
" <th>98</th>\n",
" <td>HGNC:32790</td>\n",
" <td>PNO1</td>\n",
" <td>224.609600</td>\n",
" <td>mouse RNA-binding protein NOB1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>83</th>\n",
" <td>HGNC:31113</td>\n",
" <td>RAC1P4</td>\n",
" <td>197.575290</td>\n",
" <td>mouse Ras-related protein Rab-11B</td>\n",
" </tr>\n",
" <tr>\n",
" <th>418</th>\n",
" <td>HGNC:24542</td>\n",
" <td>DPCD</td>\n",
" <td>194.529160</td>\n",
" <td>mouse Son of sevenless homolog 1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>875</th>\n",
" <td>HGNC:10676</td>\n",
" <td>SDF2L1</td>\n",
" <td>322.590850</td>\n",
" <td>mouse Stromal cell-derived factor 1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>616</th>\n",
" <td>HGNC:24542</td>\n",
" <td>DPCD</td>\n",
" <td>129.926680</td>\n",
" <td>mouse Transcription factor p65</td>\n",
" </tr>\n",
" <tr>\n",
" <th>363</th>\n",
" <td>HGNC:18170</td>\n",
" <td>CMPK1</td>\n",
" <td>224.379180</td>\n",
" <td>mouse UMP-CMP kinase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>795</th>\n",
" <td>HGNC:9831</td>\n",
" <td>RAG1</td>\n",
" <td>229.214780</td>\n",
" <td>mouse V(D)J recombination-activating protein 2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1022</th>\n",
" <td>HGNC:6570</td>\n",
" <td>LGALS9</td>\n",
" <td>163.622130</td>\n",
" <td>mouse galectin 9</td>\n",
" </tr>\n",
" <tr>\n",
" <th>338</th>\n",
" <td>HGNC:24542</td>\n",
" <td>DPCD</td>\n",
" <td>129.926680</td>\n",
" <td>mouse metallothionein-1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1005</th>\n",
" <td>HGNC:7127</td>\n",
" <td>MLH1</td>\n",
" <td>134.551700</td>\n",
" <td>mutL</td>\n",
" </tr>\n",
" <tr>\n",
" <th>1007</th>\n",
" <td>HGNC:9535</td>\n",
" <td>PSMA6</td>\n",
" <td>23.745762</td>\n",
" <td>mxt-1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>705</th>\n",
" <td>HGNC:242</td>\n",
" <td>ADCYAP1R1</td>\n",
" <td>134.326340</td>\n",
" <td>nuclear receptors type I</td>\n",
" </tr>\n",
" <tr>\n",
" <th>785</th>\n",
" <td>HGNC:586</td>\n",
" <td>APEH</td>\n",
" <td>95.934670</td>\n",
" <td>pepBs1-Ac peptide</td>\n",
" </tr>\n",
" <tr>\n",
" <th>571</th>\n",
" <td>HGNC:4163</td>\n",
" <td>GART</td>\n",
" <td>93.961590</td>\n",
" <td>perosamine synthetase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>368</th>\n",
" <td>HGNC:9237</td>\n",
" <td>PPARGC1A</td>\n",
" <td>591.163600</td>\n",
" <td>peroxisome-proliferator-activated receptor-gamma coactivator-1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>281</th>\n",
" <td>HGNC:50295</td>\n",
" <td>YWHABP2</td>\n",
" <td>146.384400</td>\n",
" <td>phenol 2-monooxygenase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>161</th>\n",
" <td>HGNC:10609</td>\n",
" <td>CCL1</td>\n",
" <td>60.942642</td>\n",
" <td>phepropeptin C</td>\n",
" </tr>\n",
" <tr>\n",
" <th>353</th>\n",
" <td>HGNC:5233</td>\n",
" <td>HSPA1B</td>\n",
" <td>249.243990</td>\n",
" <td>pig Heat shock 70 kDa protein 1B</td>\n",
" </tr>\n",
" <tr>\n",
" <th>296</th>\n",
" <td>HGNC:5981</td>\n",
" <td>IL17A</td>\n",
" <td>199.311000</td>\n",
" <td>pig Interleukin-17A</td>\n",
" </tr>\n",
" <tr>\n",
" <th>474</th>\n",
" <td>HGNC:8602</td>\n",
" <td>PAPPA</td>\n",
" <td>232.461200</td>\n",
" <td>pregnancy-associated glycoprotein 1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>500</th>\n",
" <td>HGNC:25523</td>\n",
" <td>CCDC88A</td>\n",
" <td>34.180027</td>\n",
" <td>protein filaments</td>\n",
" </tr>\n",
" <tr>\n",
" <th>333</th>\n",
" <td>HGNC:4270</td>\n",
" <td>GIP</td>\n",
" <td>298.254820</td>\n",
" <td>rat Gastric inhibitory polypeptide</td>\n",
" </tr>\n",
" <tr>\n",
" <th>695</th>\n",
" <td>HGNC:4191</td>\n",
" <td>GCG</td>\n",
" <td>126.472210</td>\n",
" <td>rat Glucagon</td>\n",
" </tr>\n",
" <tr>\n",
" <th>596</th>\n",
" <td>HGNC:4391</td>\n",
" <td>GNAQP1</td>\n",
" <td>288.349000</td>\n",
" <td>rat Guanine nucleotide-binding protein G(i) subunit alpha-1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>50</th>\n",
" <td>HGNC:4812</td>\n",
" <td>HAP1</td>\n",
" <td>121.417590</td>\n",
" <td>rat Huntingtin</td>\n",
" </tr>\n",
" <tr>\n",
" <th>398</th>\n",
" <td>HGNC:8596</td>\n",
" <td>PAM</td>\n",
" <td>718.932100</td>\n",
" <td>rat Peptidylglycine alpha-amidating monooxygenase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>55</th>\n",
" <td>HGNC:1242</td>\n",
" <td>C1QB</td>\n",
" <td>129.971080</td>\n",
" <td>rat Relaxin B chain</td>\n",
" </tr>\n",
" <tr>\n",
" <th>302</th>\n",
" <td>HGNC:14344</td>\n",
" <td>C1QTNF5</td>\n",
" <td>11.926088</td>\n",
" <td>rtn1-a</td>\n",
" </tr>\n",
" <tr>\n",
" <th>65</th>\n",
" <td>HGNC:9535</td>\n",
" <td>PSMA6</td>\n",
" <td>23.745762</td>\n",
" <td>sao-1</td>\n",
" </tr>\n",
" <tr>\n",
" <th>965</th>\n",
" <td>HGNC:25230</td>\n",
" <td>AHDC1</td>\n",
" <td>127.822060</td>\n",
" <td>sequence-specific DNA binding proteins</td>\n",
" </tr>\n",
" <tr>\n",
" <th>0</th>\n",
" <td>HGNC:5285</td>\n",
" <td>HTOR</td>\n",
" <td>186.956040</td>\n",
" <td>serotonin 5 receptor</td>\n",
" </tr>\n",
" <tr>\n",
" <th>681</th>\n",
" <td>HGNC:399</td>\n",
" <td>ALB</td>\n",
" <td>141.573330</td>\n",
" <td>serum albumin, bovine (152-168)</td>\n",
" </tr>\n",
" <tr>\n",
" <th>235</th>\n",
" <td>HGNC:256</td>\n",
" <td>ADH7</td>\n",
" <td>114.825550</td>\n",
" <td>sigma receptors</td>\n",
" </tr>\n",
" <tr>\n",
" <th>892</th>\n",
" <td>HGNC:28850</td>\n",
" <td>TSKU</td>\n",
" <td>277.089480</td>\n",
" <td>small leucine-rich proteoglycan (SLRP) family</td>\n",
" </tr>\n",
" <tr>\n",
" <th>671</th>\n",
" <td>HGNC:586</td>\n",
" <td>APEH</td>\n",
" <td>95.934670</td>\n",
" <td>sodium-influx-stimulating peptide</td>\n",
" </tr>\n",
" <tr>\n",
" <th>636</th>\n",
" <td>HGNC:4685</td>\n",
" <td>GUCY1A1</td>\n",
" <td>121.417590</td>\n",
" <td>soluble secreted endopeptidase</td>\n",
" </tr>\n",
" <tr>\n",
" <th>940</th>\n",
" <td>HGNC:17150</td>\n",
" <td>CARHSP1</td>\n",
" <td>162.878900</td>\n",
" <td>stable plasma protein solution</td>\n",
" </tr>\n",
" <tr>\n",
" <th>581</th>\n",
" <td>HGNC:1152</td>\n",
" <td>BVES</td>\n",
" <td>141.573330</td>\n",
" <td>substance P-like peptides</td>\n",
" </tr>\n",
" <tr>\n",
" <th>870</th>\n",
" <td>HGNC:3537</td>\n",
" <td>F2R</td>\n",
" <td>162.958540</td>\n",
" <td>thrombin receptor peptide (42-47)</td>\n",
" </tr>\n",
" <tr>\n",
" <th>955</th>\n",
" <td>HGNC:3308</td>\n",
" <td>CELA1</td>\n",
" <td>119.450580</td>\n",
" <td>trypsin drug combination chymotrypsin</td>\n",
" </tr>\n",
" <tr>\n",
" <th>494</th>\n",
" <td>HGNC:9544</td>\n",
" <td>PSMB7</td>\n",
" <td>25.714252</td>\n",
" <td>vha-2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>890</th>\n",
" <td>HGNC:9536</td>\n",
" <td>PSMA7</td>\n",
" <td>23.745762</td>\n",
" <td>vit-4</td>\n",
" </tr>\n",
" <tr>\n",
" <th>441</th>\n",
" <td>HGNC:32060</td>\n",
" <td>H3-2</td>\n",
" <td>331.249020</td>\n",
" <td>xenopus laevis Histone H3.2</td>\n",
" </tr>\n",
" <tr>\n",
" <th>472</th>\n",
" <td>HGNC:53808</td>\n",
" <td>PFN5P</td>\n",
" <td>153.995420</td>\n",
" <td>zea mays Profilin-5</td>\n",
" </tr>\n",
" </tbody>\n",
"</table>\n",
"</div>"
],
"text/plain": [
" hgnc_id gene_symbol score \\\n",
"505 HGNC:28372 PIP5K1P1 453.979300 \n",
"261 HGNC:18917 KRTAP17-1 174.670670 \n",
"1062 HGNC:44286 RNA28S1 175.471590 \n",
"641 HGNC:24175 HACD3 526.172060 \n",
"60 HGNC:5285 HTOR 141.573330 \n",
"770 HGNC:14632 ADAMTSL1 123.713850 \n",
"700 HGNC:4574 GRIA4 392.381200 \n",
"822 HGNC:93 ACAT1 16.205736 \n",
"832 HGNC:2084 CLPP 311.254640 \n",
"433 HGNC:24298 PFN1P2 138.272190 \n",
"224 HGNC:80 AOC1 152.958370 \n",
"271 HGNC:2666 DAG1 231.511500 \n",
"378 HGNC:17379 APBB1IP 130.228650 \n",
"601 HGNC:12790 GET1 116.201260 \n",
"710 HGNC:19006 HIPK1 137.506840 \n",
"495 HGNC:38276 MIR4304 141.573330 \n",
"209 HGNC:18356 ACER1 136.772780 \n",
"428 HGNC:1064 BLYM 232.555680 \n",
"291 HGNC:993 BCL2L10 198.737920 \n",
"436 HGNC:4795 H6PD 80.768394 \n",
"461 HGNC:9479 LONP1 144.285370 \n",
"343 HGNC:28372 PIP5K1P1 112.841194 \n",
"510 HGNC:20363 AREL1 81.628970 \n",
"760 HGNC:7849 NME1 273.430240 \n",
"109 HGNC:2561 CXCR4 530.141900 \n",
"606 HGNC:24462 CLECL1 866.798700 \n",
"917 HGNC:29859 ABI3 33.832092 \n",
"591 HGNC:1645 CD24 215.258670 \n",
"129 HGNC:9535 PSMA6 23.745762 \n",
"373 HGNC:29859 ABI3 33.832092 \n",
"902 HGNC:23364 ST6GALNAC6 361.511750 \n",
"196 HGNC:10491 S100A11P1 176.073500 \n",
"765 HGNC:9954 REL 490.675050 \n",
"980 HGNC:19650 CHST10 167.412110 \n",
"1009 HGNC:4069 GABARAPL3 85.519610 \n",
"1067 HGNC:255 ADH6 87.527880 \n",
"731 HGNC:2334 CR1 228.922680 \n",
"950 HGNC:421 ALDRL2 91.778630 \n",
"995 HGNC:1585 CCND3 108.612724 \n",
"307 HGNC:28808 AP1AR 25.254301 \n",
"716 HGNC:7976 NR2F2 206.061650 \n",
"5 HGNC:14784 OR5P3 126.588005 \n",
"245 HGNC:11754 TFEC 141.573330 \n",
"1052 HGNC:11754 TFEC 141.573330 \n",
"751 HGNC:11754 TFEC 141.573330 \n",
"626 HGNC:11754 TFEC 141.573330 \n",
"1072 HGNC:11754 TFEC 141.573330 \n",
"970 HGNC:11754 TFEC 141.573330 \n",
"922 HGNC:11754 TFEC 141.573330 \n",
"752 HGNC:11754 TFEC 141.573330 \n",
"389 HGNC:11754 TFEC 141.573330 \n",
"41 HGNC:11754 TFEC 141.573330 \n",
"234 HGNC:11754 TFEC 141.573330 \n",
"715 HGNC:11754 TFEC 141.573330 \n",
"565 HGNC:11754 TFEC 141.573330 \n",
"897 HGNC:11754 TFEC 141.573330 \n",
"82 HGNC:11754 TFEC 141.573330 \n",
"842 HGNC:11754 TFEC 141.573330 \n",
"15 HGNC:11754 TFEC 141.573330 \n",
"312 HGNC:11754 TFEC 141.573330 \n",
"383 HGNC:11754 TFEC 141.573330 \n",
"466 HGNC:11754 TFEC 141.573330 \n",
"885 HGNC:11754 TFEC 141.573330 \n",
"201 HGNC:11754 TFEC 141.573330 \n",
"408 HGNC:27029 ATPSCKMT 143.365660 \n",
"358 HGNC:3129 EBI3 543.000000 \n",
"560 HGNC:6209 K12T 141.573330 \n",
"266 HGNC:14487 MRPL33 200.982820 \n",
"545 HGNC:28272 CENPBD1P 387.675400 \n",
"16 HGNC:6209 K12T 141.573330 \n",
"171 HGNC:6209 K12T 141.573330 \n",
"912 HGNC:6209 K12T 141.573330 \n",
"36 HGNC:6209 K12T 141.573330 \n",
"515 HGNC:11758 TFG 141.573330 \n",
"746 HGNC:3959 FRZB 107.803925 \n",
"348 HGNC:3825 FPGT 126.472210 \n",
"240 HGNC:4114 GAL 123.713850 \n",
"661 HGNC:4375 GML 116.201260 \n",
"621 HGNC:3638 FDX1 121.417590 \n",
"323 HGNC:29227 HEG1 482.595500 \n",
"566 HGNC:4920 HIVEP1 206.318740 \n",
"1027 HGNC:4920 HIVEP1 206.318740 \n",
"1057 HGNC:15781 CHRFAM7A 158.503720 \n",
"467 HGNC:28808 AP1AR 25.254301 \n",
"827 HGNC:586 APEH 95.934670 \n",
"535 HGNC:42786 LINC00449 123.713850 \n",
"151 HGNC:16011 ASB1 51.808920 \n",
"67 HGNC:12441 TYMS 129.926680 \n",
"276 HGNC:4823 HBA1 153.791660 \n",
"104 HGNC:7103 MIP 477.520260 \n",
"525 HGNC:7985 NR6A1 346.633300 \n",
"176 HGNC:9265 PPIAP12 63.450413 \n",
"204 HGNC:820 ATP4B 165.872700 \n",
"93 HGNC:28171 HDHD3 166.426670 \n",
"790 HGNC:7455 MT-ND1 811.848140 \n",
"313 HGNC:29 ABCA1 48.321808 \n",
"810 HGNC:102 CNNM1 126.472210 \n",
"119 HGNC:102 CNNM1 126.472210 \n",
"843 HGNC:4069 GABARAPL3 85.519610 \n",
"925 HGNC:9658 PTPN6 559.188540 \n",
"451 HGNC:3609 FCER1A 126.472210 \n",
"631 HGNC:4828 HBBP1 230.725160 \n",
"328 HGNC:17911 ALKBH1 167.914860 \n",
"246 HGNC:4827 HBB 210.153630 \n",
"423 HGNC:8986 PIM1 129.926680 \n",
"156 HGNC:3450 ERPL1 134.551700 \n",
"286 HGNC:20363 AREL1 81.628970 \n",
"935 HGNC:9495 PRTN3 141.573330 \n",
"1042 HGNC:21204 IPCEF1 134.551700 \n",
"124 HGNC:21715 PKD1L2 407.111880 \n",
"805 HGNC:18731 PDCD1LG2 399.105830 \n",
"31 HGNC:395 ALAD 110.388820 \n",
"800 HGNC:28808 AP1AR 25.254301 \n",
"166 HGNC:28628 NOPCHAP1 120.183840 \n",
"853 HGNC:42678 LINC00358 123.713850 \n",
"550 HGNC:18388 SFTPI 185.208620 \n",
"1000 HGNC:8539 P2RY1 251.962160 \n",
"611 HGNC:24434 GLYR1 203.900420 \n",
"990 HGNC:586 APEH 95.934670 \n",
"1032 HGNC:1933 CHI3L2 147.389590 \n",
"114 HGNC:11314 SSAV1 241.100660 \n",
"576 HGNC:35454 ECSCR 141.573330 \n",
"251 HGNC:395 ALAD 110.388820 \n",
"755 HGNC:32555 SCARNA1 520.596200 \n",
"10 HGNC:11001 SLC28A1 141.114090 \n",
"219 HGNC:11386 STIM1 572.798000 \n",
"214 HGNC:586 APEH 95.934670 \n",
"384 HGNC:29859 ABI3 33.832092 \n",
"484 HGNC:12790 GET1 116.201260 \n",
"72 HGNC:7393 MT1A 103.751720 \n",
"1073 HGNC:20657 TSPAN1 104.349450 \n",
"975 HGNC:1915 CHD1 98.907234 \n",
"1047 HGNC:11881 TMSB4X 119.450580 \n",
"77 HGNC:34804 TRNAC17 115.244934 \n",
"1037 HGNC:19431 CNIH1 73.076780 \n",
"520 HGNC:12828 XRCC1 728.652830 \n",
"651 HGNC:2590 CYP11A1 221.391310 \n",
"131 HGNC:12845 YPEL1 123.713850 \n",
"741 HGNC:17389 SMPDL3A 274.504200 \n",
"103 HGNC:9544 PSMB7 25.714252 \n",
"181 HGNC:87 ACAD8 352.918370 \n",
"26 HGNC:9173 POLA1 257.254880 \n",
"930 HGNC:9530 PSMA1 20.707401 \n",
"456 HGNC:12383 EIPR1 67.255330 \n",
"394 HGNC:10008 RHCE 134.551700 \n",
"880 HGNC:69 ABCE1 69.619480 \n",
"186 HGNC:741 ASD1 141.573330 \n",
"817 HGNC:30743 TSLP 141.573330 \n",
"479 HGNC:15864 RBCK1 88.616700 \n",
"726 HGNC:2727 DDO 497.751300 \n",
"256 HGNC:2345 CREB1 242.835900 \n",
"960 HGNC:9251 CTSA 104.349450 \n",
"21 HGNC:1907 CH25H 117.730130 \n",
"815 HGNC:9530 PSMA1 23.745762 \n",
"141 HGNC:14344 C1QTNF5 11.926088 \n",
"646 HGNC:31113 RAC1P4 58.213450 \n",
"1012 HGNC:1577 CCNA1 82.105050 \n",
"555 HGNC:568 AP3D1 106.075080 \n",
"907 HGNC:2 A12M2 235.417340 \n",
"318 HGNC:16709 CALCRL 46.518234 \n",
"868 HGNC:587 APEX1 134.551700 \n",
"676 HGNC:18149 A4GALT 90.088010 \n",
"686 HGNC:3519 EYA1 126.472210 \n",
"540 HGNC:4795 H6PD 205.838180 \n",
"721 HGNC:24862 MOGS 166.016850 \n",
"666 HGNC:11850 TLR4 232.904710 \n",
"985 HGNC:24854 STBD1 141.573330 \n",
"690 HGNC:18075 AHSP 109.472110 \n",
"413 HGNC:3059 HBEGF 129.926680 \n",
"191 HGNC:24945 GPIHBP1 293.912930 \n",
"403 HGNC:146 ACTG1P1 103.075200 \n",
"45 HGNC:6535 LDHA 173.768550 \n",
"863 HGNC:39817 LINC00481 126.472210 \n",
"136 HGNC:252 ADH4 81.282410 \n",
"780 HGNC:14344 C1QTNF5 11.926088 \n",
"1017 HGNC:18714 DCP1A 205.289750 \n",
"586 HGNC:2728 DDOST 109.472110 \n",
"489 HGNC:14344 C1QTNF5 11.926088 \n",
"229 HGNC:1984 CISH 189.992280 \n",
"736 HGNC:4795 H6PD 80.768394 \n",
"858 HGNC:4593 GRM1 245.240890 \n",
"299 HGNC:9031 PLA2G2A 69.941270 \n",
"656 HGNC:13916 APOM 181.136000 \n",
"530 HGNC:2432 CSF1 269.673160 \n",
"775 HGNC:24542 DPCD 129.926680 \n",
"945 HGNC:6174 ITM2B 263.222470 \n",
"146 HGNC:49430 YWHAEP3 161.898220 \n",
"837 HGNC:24862 MOGS 546.137600 \n",
"848 HGNC:17644 PIWIL2 214.691820 \n",
"88 HGNC:19318 P3H3 408.603270 \n",
"446 HGNC:8864 CFP 141.573330 \n",
"98 HGNC:32790 PNO1 224.609600 \n",
"83 HGNC:31113 RAC1P4 197.575290 \n",
"418 HGNC:24542 DPCD 194.529160 \n",
"875 HGNC:10676 SDF2L1 322.590850 \n",
"616 HGNC:24542 DPCD 129.926680 \n",
"363 HGNC:18170 CMPK1 224.379180 \n",
"795 HGNC:9831 RAG1 229.214780 \n",
"1022 HGNC:6570 LGALS9 163.622130 \n",
"338 HGNC:24542 DPCD 129.926680 \n",
"1005 HGNC:7127 MLH1 134.551700 \n",
"1007 HGNC:9535 PSMA6 23.745762 \n",
"705 HGNC:242 ADCYAP1R1 134.326340 \n",
"785 HGNC:586 APEH 95.934670 \n",
"571 HGNC:4163 GART 93.961590 \n",
"368 HGNC:9237 PPARGC1A 591.163600 \n",
"281 HGNC:50295 YWHABP2 146.384400 \n",
"161 HGNC:10609 CCL1 60.942642 \n",
"353 HGNC:5233 HSPA1B 249.243990 \n",
"296 HGNC:5981 IL17A 199.311000 \n",
"474 HGNC:8602 PAPPA 232.461200 \n",
"500 HGNC:25523 CCDC88A 34.180027 \n",
"333 HGNC:4270 GIP 298.254820 \n",
"695 HGNC:4191 GCG 126.472210 \n",
"596 HGNC:4391 GNAQP1 288.349000 \n",
"50 HGNC:4812 HAP1 121.417590 \n",
"398 HGNC:8596 PAM 718.932100 \n",
"55 HGNC:1242 C1QB 129.971080 \n",
"302 HGNC:14344 C1QTNF5 11.926088 \n",
"65 HGNC:9535 PSMA6 23.745762 \n",
"965 HGNC:25230 AHDC1 127.822060 \n",
"0 HGNC:5285 HTOR 186.956040 \n",
"681 HGNC:399 ALB 141.573330 \n",
"235 HGNC:256 ADH7 114.825550 \n",
"892 HGNC:28850 TSKU 277.089480 \n",
"671 HGNC:586 APEH 95.934670 \n",
"636 HGNC:4685 GUCY1A1 121.417590 \n",
"940 HGNC:17150 CARHSP1 162.878900 \n",
"581 HGNC:1152 BVES 141.573330 \n",
"870 HGNC:3537 F2R 162.958540 \n",
"955 HGNC:3308 CELA1 119.450580 \n",
"494 HGNC:9544 PSMB7 25.714252 \n",
"890 HGNC:9536 PSMA7 23.745762 \n",
"441 HGNC:32060 H3-2 331.249020 \n",
"472 HGNC:53808 PFN5P 153.995420 \n",
"\n",
" term \n",
"505 1-phosphatidylinositol-4-phosphate 5-kinase activity proteins \n",
"261 17.1 \n",
"1062 28S Ribosomal RNA \n",
"641 3-hydroxyacyl-CoA dehydrogenases \n",
"60 5-HT2B Serotonin Receptor \n",
"770 ADAMTS \n",
"700 AMPA 4 glutamate receptor ionotropic \n",
"822 AN-1792 \n",
"832 ATP-dependent Clp protease proteolytic subunit \n",
"433 Acanthamoeba castellanii Profilin-2 \n",
"224 Alcaligenes faecalis Copper-containing nitrite reductase \n",
"271 Alpha-dystroglycan \n",
"378 Amyloid protein AA2 \n",
"601 Angiogenic Proteins \n",
"710 Antennapedia Homeodomain Protein \n",
"495 Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) Proteasome-activating nucleotidase \n",
"209 Aspergillus flavus Alkaline protease 1 \n",
"428 Avian infectious bronchitis virus (strain M41) Spike glycoprotein \n",
"291 BCL2-like 10 protein \n",
"436 Bacillus cereus Leucine dehydrogenase \n",
"461 Bacillus subtilis (strain 168) Lon protease 1 \n",
"343 Bacillus thuringiensis 1-phosphatidylinositol phosphodiesterase \n",
"510 Biotin-protein ligase \n",
"760 Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264) Nucleoside diphosphate kinase \n",
"109 C-X-C chemokine receptors type 4 \n",
"606 C-type lectin-like \n",
"917 CD-NTase family \n",
"591 CD24 Antigen \n",
"129 CDKC-1 \n",
"373 CDP-glycerol glycerophosphotransferase family \n",
"902 CMP-N-acetylneuraminate-alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase \n",
"196 Calcium-Binding Proteins \n",
"765 Canonical NF-KB pathway \n",
"980 Carbohydrate binding module family 10 \n",
"1009 Catecholamine Receptors \n",
"1067 Cohn fraction V \n",
"731 Complement C3b Inactivator Proteins \n",
"950 Cortisone Reductase \n",
"995 D3 peptide \n",
"307 DEFB4A protein \n",
"716 Dermatophagoides farinae Mite group 2 allergen Der f 2 \n",
"5 Dermatophagoides pteronyssinus antigen p 3 \n",
"245 EC 1.14.14.88 \n",
"1052 EC 1.2.3.4 \n",
"751 EC 1.21.99.4 \n",
"626 EC 1.4.1.5 \n",
"1072 EC 1.4.3.16 \n",
"970 EC 1.4.3.3 \n",
"922 EC 1.5.3.7 \n",
"752 EC 1.8.1.19 \n",
"389 EC 2.3.1.3 \n",
"41 EC 2.3.3.13 \n",
"234 EC 2.4.1.88 \n",
"715 EC 2.6.1.72 \n",
"565 EC 2.7.11.19 \n",
"897 EC 3.3.2.1 \n",
"82 EC 3.5.1.41 \n",
"842 EC 4.1.1.83 \n",
"15 EC 4.1.2.22 \n",
"312 EC 4.2.1.82 \n",
"383 EC 4.2.3.73 \n",
"466 EC 4.2.3.86 \n",
"885 EC 5.1.2.3 \n",
"201 EC 6.3.2.12 \n",
"408 Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) Isopenicillin N synthase \n",
"358 Epstein-Barr viral capsid antigen \n",
"560 Escherichia coli (strain K12) 2-dehydropantoate 2-reductase \n",
"266 Escherichia coli (strain K12) 50S ribosomal protein L33 \n",
"545 Escherichia coli (strain K12) DNA-binding transcriptional dual regulator ModE \n",
"16 Escherichia coli (strain K12) Multidrug efflux pump subunit AcrB \n",
"171 Escherichia coli (strain K12) PEP-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL \n",
"912 Escherichia coli (strain K12) Protein translocase subunit SecE \n",
"36 Escherichia coli (strain K12) Thymidylate synthase \n",
"515 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) Lysis protein S homolog from lambdoid prophage DLP12 \n",
"746 Frizzled receptors \n",
"348 GTP-RNA guanylyltransferase \n",
"240 Galanin \n",
"661 Glycosylphosphatidylinositol Diacylglycerol-Lyase \n",
"621 Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) Ferredoxin \n",
"323 Heart Development \n",
"566 Human Immunodeficiency Virus-1 rev protein \n",
"1027 Human immunodeficiency virus 1 gp41 protein \n",
"1057 Human respiratory syncytial virus A (strain A2) Fusion glycoprotein F0 \n",
"467 IFNA1 protein \n",
"827 INGAP peptide \n",
"535 JMV 449 \n",
"151 Krueppel-associated box \n",
"67 Lactobacillus casei Thymidylate synthase \n",
"276 Macropus eugenii Hemoglobin subunit omega \n",
"104 Major intrinsic protein \n",
"525 Member 1 Group A Nuclear Receptor Subfamily 6 \n",
"176 Metamorphosin A \n",
"204 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) Prefoldin subunit beta \n",
"93 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) Haloalkane dehalogenase 3 \n",
"790 NADH:ubiquinone oxidoreductase \n",
"313 NR3 subfamily \n",
"810 Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) Probable beta-glucosidase A \n",
"119 Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) Probable endo-beta-1,4-glucanase D \n",
"843 Neurokinin receptors \n",
"925 Non-Receptor Type 6 Protein Tyrosine Phosphatase \n",
"451 ORF Ia \n",
"631 Oncorhynchus mykiss Hemoglobin subunit beta-1 \n",
"328 Oncorhynchus mykiss Histone H2A \n",
"246 Ovis aries musimon Hemoglobin subunit beta \n",
"423 PIM family \n",
"156 POL \n",
"286 Pantoate-beta-alanine ligase \n",
"935 Parengyodontium album Proteinase K \n",
"1042 Peptide Initiation Factors \n",
"124 Polycystic Kidney Disease 1-Like \n",
"805 Programmed Cell Death 1 Ligand 2 Protein \n",
"31 Propanediol Dehydratase \n",
"800 Protein FAM49B \n",
"166 Proteus mirabilis (strain HI4320) Chaperone protein PmfD \n",
"853 Pseudomonas putida Ferric-pseudobactin 358 receptor \n",
"550 Pulmonary Surfactant-Associated Protein A \n",
"1000 Purinergic P2Y1 Receptors \n",
"611 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) Glyoxylate reductase \n",
"990 RVF peptide \n",
"1032 Rhizopus oligosporus Chitinase 2 \n",
"114 Rous sarcoma virus protease \n",
"576 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) Chemotaxis protein CheY \n",
"251 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) L-rhamnonate dehydratase \n",
"755 Small Cajal body-specific RNA \n",
"10 Sodium-Coupled Vitamin C Transporters \n",
"219 Stromal interaction molecule \n",
"214 TAT-BH4 peptide \n",
"384 TFE family \n",
"484 Tacrolimus Binding Proteins \n",
"72 Tetrahymena thermophila Cadmium metallothionein \n",
"1073 Tetraspanin \n",
"975 Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) DNA integrity scanning protein DisA \n",
"1047 Thymosin alpha-1 \n",
"77 Tyr Transfer RNA \n",
"1037 VEGF receptor family \n",
"520 X-ray Repair Cross Complementing Protein 1 \n",
"651 XI-A \n",
"131 Yippee \n",
"741 acid sphingomyelin phosphodiesterase activity proteins \n",
"103 acl-2 \n",
"181 acyl-CoA transferase \n",
"26 alpha subunit DNA polymerase III \n",
"930 alpha-maltosidase \n",
"456 anti-inhibitor coagulant complex \n",
"394 antigens \n",
"880 apratoxin E \n",
"186 atrial natriuretic factor prohormone (103-125) \n",
"817 avian thymic hormone \n",
"479 bovine herpesvirus type-1 glycoproteins \n",
"726 c. elegans D-aspartate oxidase 3 \n",
"256 cAMP response element binding proteins \n",
"960 cathepsin Q \n",
"21 cholesterol dehydrogenase \n",
"815 con-6 \n",
"141 ctdspl2-a \n",
"646 cyanobacterial toxin \n",
"1012 cyclin X \n",
"555 delta protein \n",
"907 deltorphin II, Ala(2)- \n",
"318 ecdysone receptor \n",
"868 endodeoxyribonuclease BsmBI \n",
"676 enterocin P \n",
"686 eya \n",
"540 glucose-1-phosphate thymidylyltransferase \n",
"721 glucosidase I \n",
"666 gorilla Toll-like receptor 4 \n",
"985 granule-bound starch synthase I \n",
"690 hemoglobin Portland \n",
"413 heparin proteoglycan \n",
"191 high density lipoprotein receptors \n",
"403 horse Actin, cytoplasmic 1 \n",
"45 lactate dehydrogenase C4 \n",
"863 lacticin 481 \n",
"136 leghemoglobin II \n",
"780 lmo4-a \n",
"1017 mRNA decapping enzymes \n",
"586 macrolide glycosyltransferase \n",
"489 mecom-a \n",
"229 member 1 small inducible cytokine subfamily E \n",
"736 meso-tartrate dehydrogenase \n",
"858 metabotropic glutamate receptor 4b \n",
"299 modified fluid gelatins \n",
"656 mouse Apolipoprotein M \n",
"530 mouse Granulocyte colony-stimulating factor \n",
"775 mouse HCCR1 protein \n",
"945 mouse Integral membrane protein 2B \n",
"146 mouse Lymphocyte activation gene 3 protein \n",
"837 mouse Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB \n",
"848 mouse Piwi-like protein 2 \n",
"88 mouse Prolyl 3-hydroxylase 3 \n",
"446 mouse Properdin \n",
"98 mouse RNA-binding protein NOB1 \n",
"83 mouse Ras-related protein Rab-11B \n",
"418 mouse Son of sevenless homolog 1 \n",
"875 mouse Stromal cell-derived factor 1 \n",
"616 mouse Transcription factor p65 \n",
"363 mouse UMP-CMP kinase \n",
"795 mouse V(D)J recombination-activating protein 2 \n",
"1022 mouse galectin 9 \n",
"338 mouse metallothionein-1 \n",
"1005 mutL \n",
"1007 mxt-1 \n",
"705 nuclear receptors type I \n",
"785 pepBs1-Ac peptide \n",
"571 perosamine synthetase \n",
"368 peroxisome-proliferator-activated receptor-gamma coactivator-1 \n",
"281 phenol 2-monooxygenase \n",
"161 phepropeptin C \n",
"353 pig Heat shock 70 kDa protein 1B \n",
"296 pig Interleukin-17A \n",
"474 pregnancy-associated glycoprotein 1 \n",
"500 protein filaments \n",
"333 rat Gastric inhibitory polypeptide \n",
"695 rat Glucagon \n",
"596 rat Guanine nucleotide-binding protein G(i) subunit alpha-1 \n",
"50 rat Huntingtin \n",
"398 rat Peptidylglycine alpha-amidating monooxygenase \n",
"55 rat Relaxin B chain \n",
"302 rtn1-a \n",
"65 sao-1 \n",
"965 sequence-specific DNA binding proteins \n",
"0 serotonin 5 receptor \n",
"681 serum albumin, bovine (152-168) \n",
"235 sigma receptors \n",
"892 small leucine-rich proteoglycan (SLRP) family \n",
"671 sodium-influx-stimulating peptide \n",
"636 soluble secreted endopeptidase \n",
"940 stable plasma protein solution \n",
"581 substance P-like peptides \n",
"870 thrombin receptor peptide (42-47) \n",
"955 trypsin drug combination chymotrypsin \n",
"494 vha-2 \n",
"890 vit-4 \n",
"441 xenopus laevis Histone H3.2 \n",
"472 zea mays Profilin-5 "
]
},
"execution_count": 12,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"pd.set_option('display.max_rows', 250)\n",
"pd.set_option('display.max_colwidth', 250)\n",
"dfr.pipe(lambda df: df[df['rank'] == 0]).drop(columns='rank').sort_values('term')"
]
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.8.8"
}
},
"nbformat": 4,
"nbformat_minor": 5
}
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