Created
March 27, 2017 12:52
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(partial) EasyBuild log for failed build of /tmp/eb-dk3PbP/files_pr4399/b/BerkeleyGW/BerkeleyGW-1.2.0-intel-2017a.eb (PR #4399)
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| == 2017-03-27 14:51:50,091 environment.py:97 INFO Environment variable MPIFC set to mpiifort (previously undefined) | |
| == 2017-03-27 14:51:50,091 environment.py:97 INFO Environment variable EBVARMPIFC set to mpiifort (previously undefined) | |
| == 2017-03-27 14:51:50,091 toolchain.py:872 DEBUG _setenv_variables: setting environment variable MPI_INC_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/include64 | |
| == 2017-03-27 14:51:50,091 environment.py:97 INFO Environment variable MPI_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/include64 (previously undefined) | |
| == 2017-03-27 14:51:50,091 environment.py:97 INFO Environment variable EBVARMPI_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/include64 (previously undefined) | |
| == 2017-03-27 14:51:50,091 toolchain.py:872 DEBUG _setenv_variables: setting environment variable MPI_LIB_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64 | |
| == 2017-03-27 14:51:50,092 environment.py:97 INFO Environment variable MPI_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64 (previously undefined) | |
| == 2017-03-27 14:51:50,092 environment.py:97 INFO Environment variable EBVARMPI_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64 (previously undefined) | |
| == 2017-03-27 14:51:50,092 toolchain.py:872 DEBUG _setenv_variables: setting environment variable MPI_LIB_SHARED to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.so | |
| == 2017-03-27 14:51:50,092 environment.py:97 INFO Environment variable MPI_LIB_SHARED set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.so (previously undefined) | |
| == 2017-03-27 14:51:50,092 environment.py:97 INFO Environment variable EBVARMPI_LIB_SHARED set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.so (previously undefined) | |
| == 2017-03-27 14:51:50,093 toolchain.py:872 DEBUG _setenv_variables: setting environment variable MPI_LIB_STATIC to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.a | |
| == 2017-03-27 14:51:50,093 environment.py:97 INFO Environment variable MPI_LIB_STATIC set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.a (previously undefined) | |
| == 2017-03-27 14:51:50,093 environment.py:97 INFO Environment variable EBVARMPI_LIB_STATIC set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/lib64/libmpi.a (previously undefined) | |
| == 2017-03-27 14:51:50,093 toolchain.py:872 DEBUG _setenv_variables: setting environment variable OPTFLAGS to -O2 -xHost | |
| == 2017-03-27 14:51:50,093 environment.py:97 INFO Environment variable OPTFLAGS set to -O2 -xHost (previously undefined) | |
| == 2017-03-27 14:51:50,094 environment.py:97 INFO Environment variable EBVAROPTFLAGS set to -O2 -xHost (previously undefined) | |
| == 2017-03-27 14:51:50,094 toolchain.py:872 DEBUG _setenv_variables: setting environment variable PRECFLAGS to -ftz -fp-speculation=safe -fp-model source | |
| == 2017-03-27 14:51:50,094 environment.py:97 INFO Environment variable PRECFLAGS set to -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2017-03-27 14:51:50,094 environment.py:97 INFO Environment variable EBVARPRECFLAGS set to -ftz -fp-speculation=safe -fp-model source (previously undefined) | |
| == 2017-03-27 14:51:50,094 toolchain.py:872 DEBUG _setenv_variables: setting environment variable SCALAPACK_INC_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/include | |
| == 2017-03-27 14:51:50,094 environment.py:97 INFO Environment variable SCALAPACK_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined) | |
| == 2017-03-27 14:51:50,095 environment.py:97 INFO Environment variable EBVARSCALAPACK_INC_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/include (previously undefined) | |
| == 2017-03-27 14:51:50,095 toolchain.py:872 DEBUG _setenv_variables: setting environment variable SCALAPACK_LIB_DIR to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 | |
| == 2017-03-27 14:51:50,095 environment.py:97 INFO Environment variable SCALAPACK_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined) | |
| == 2017-03-27 14:51:50,095 environment.py:97 INFO Environment variable EBVARSCALAPACK_LIB_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/lib/intel64 (previously undefined) | |
| == 2017-03-27 14:51:50,095 toolchain.py:872 DEBUG _setenv_variables: setting environment variable SCALAPACK_MT_STATIC_LIBS to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a | |
| == 2017-03-27 14:51:50,096 environment.py:97 INFO Environment variable SCALAPACK_MT_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined) | |
| == 2017-03-27 14:51:50,096 environment.py:97 INFO Environment variable EBVARSCALAPACK_MT_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined) | |
| == 2017-03-27 14:51:50,096 toolchain.py:872 DEBUG _setenv_variables: setting environment variable SCALAPACK_STATIC_LIBS to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a | |
| == 2017-03-27 14:51:50,096 environment.py:97 INFO Environment variable SCALAPACK_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2017-03-27 14:51:50,096 environment.py:97 INFO Environment variable EBVARSCALAPACK_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined) | |
| == 2017-03-27 14:51:50,097 toolchain.py:722 DEBUG Using compiler cache tool 'ccache' for compilers: ['icc', 'icpc', 'ifort', 'ifort', 'ifort'] | |
| == 2017-03-27 14:51:50,097 environment.py:97 INFO Environment variable CCACHE_DIR set to /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/ccache/CO7/sandybridge (previously undefined) | |
| == 2017-03-27 14:51:50,097 environment.py:97 INFO Environment variable CCACHE_TEMPDIR set to /tmp/eb-dk3PbP/tmp49qAE1 (previously undefined) | |
| == 2017-03-27 14:51:50,098 filetools.py:265 INFO Command ccache found at /user/home/gent/vsc400/vsc40023/bin/ccache | |
| == 2017-03-27 14:51:50,099 environment.py:97 INFO Environment variable PATH set to /tmp/eb-dk3PbP/tmpCyMyAE:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/bin:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/bin:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/bin64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/binutils/2.27-GCCcore-6.3.0/bin:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/GCCcore/6.3.0/bin:/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/bin:/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin (previous value: '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/bin:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/bin:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/impi/2017.1.132-iccifort-2017.1.132-GCC-6.3.0-2.27/bin64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/ifort/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/icc/2017.1.132-GCC-6.3.0-2.27/compilers_and_libraries_2017.1.132/linux/bin/intel64:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/binutils/2.27-GCCcore-6.3.0/bin:/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/GCCcore/6.3.0/bin:/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/bin:/user/data/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ibutils/bin') | |
| == 2017-03-27 14:51:50,099 filetools.py:265 INFO Command icc found at /tmp/eb-dk3PbP/tmpCyMyAE/icc | |
| == 2017-03-27 14:51:50,099 toolchain.py:625 DEBUG which(icc): /tmp/eb-dk3PbP/tmpCyMyAE/icc -> /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023/bin/ccache | |
| == 2017-03-27 14:51:50,099 filetools.py:265 INFO Command icpc found at /tmp/eb-dk3PbP/tmpCyMyAE/icpc | |
| == 2017-03-27 14:51:50,100 toolchain.py:625 DEBUG which(icpc): /tmp/eb-dk3PbP/tmpCyMyAE/icpc -> /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023/bin/ccache | |
| == 2017-03-27 14:51:50,100 filetools.py:265 INFO Command ifort found at /tmp/eb-dk3PbP/tmpCyMyAE/ifort | |
| == 2017-03-27 14:51:50,100 toolchain.py:625 DEBUG which(ifort): /tmp/eb-dk3PbP/tmpCyMyAE/ifort -> /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023/bin/ccache | |
| == 2017-03-27 14:51:50,100 filetools.py:265 INFO Command ifort found at /tmp/eb-dk3PbP/tmpCyMyAE/ifort | |
| == 2017-03-27 14:51:50,101 toolchain.py:625 DEBUG which(ifort): /tmp/eb-dk3PbP/tmpCyMyAE/ifort -> /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023/bin/ccache | |
| == 2017-03-27 14:51:50,101 filetools.py:265 INFO Command ifort found at /tmp/eb-dk3PbP/tmpCyMyAE/ifort | |
| == 2017-03-27 14:51:50,101 toolchain.py:625 DEBUG which(ifort): /tmp/eb-dk3PbP/tmpCyMyAE/ifort -> /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023/bin/ccache | |
| == 2017-03-27 14:51:50,102 toolchain.py:627 INFO Commands symlinked to /user/home/gent/vsc400/vsc40023/bin/ccache via /tmp/eb-dk3PbP/tmpCyMyAE: icc, icpc, ifort, ifort, ifort | |
| == 2017-03-27 14:51:50,102 toolchain.py:736 DEBUG Cached compilers (after preparing for ccache): set(['icc', 'ifort', 'icpc']) | |
| == 2017-03-27 14:51:50,102 easyblock.py:1346 INFO Using /tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/ as start dir | |
| == 2017-03-27 14:51:50,102 easyblock.py:1349 DEBUG Changed to real build directory /tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/ (start_dir) | |
| == 2017-03-27 14:51:50,102 easyblock.py:2262 INFO Skipping configure step (skip: None, skipsteps: ['configure']) | |
| == 2017-03-27 14:51:50,103 build_log.py:225 INFO configuring [skipped] | |
| == 2017-03-27 14:51:50,103 easyblock.py:2279 DEBUG Not skipping build step (skippable: True, skip: None, skipsteps: ['configure'], module_only: False, force: True | |
| == 2017-03-27 14:51:50,103 build_log.py:225 INFO building... | |
| == 2017-03-27 14:51:50,103 easyblock.py:2287 INFO Starting build step | |
| == 2017-03-27 14:51:50,103 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x11a0ed0> | |
| == 2017-03-27 14:51:50,104 templates.py:175 DEBUG version found in easyconfig is 1.2.0 | |
| == 2017-03-27 14:51:50,104 templates.py:219 DEBUG name: github_account, config: None | |
| == 2017-03-27 14:51:50,104 templates.py:219 DEBUG name: name, config: BerkeleyGW | |
| == 2017-03-27 14:51:50,104 templates.py:219 DEBUG name: version, config: 1.2.0 | |
| == 2017-03-27 14:51:50,104 templates.py:219 DEBUG name: versionsuffix, config: | |
| == 2017-03-27 14:51:50,105 templates.py:219 DEBUG name: versionprefix, config: | |
| == 2017-03-27 14:51:50,105 templates.py:151 DEBUG config: <easybuild.framework.easyconfig.easyconfig.EasyConfig object at 0x11a0ed0> | |
| == 2017-03-27 14:51:50,105 templates.py:175 DEBUG version found in easyconfig is 1.2.0 | |
| == 2017-03-27 14:51:50,105 templates.py:219 DEBUG name: github_account, config: None | |
| == 2017-03-27 14:51:50,105 templates.py:219 DEBUG name: name, config: BerkeleyGW | |
| == 2017-03-27 14:51:50,106 templates.py:219 DEBUG name: version, config: 1.2.0 | |
| == 2017-03-27 14:51:50,106 templates.py:219 DEBUG name: versionsuffix, config: | |
| == 2017-03-27 14:51:50,106 templates.py:219 DEBUG name: versionprefix, config: | |
| == 2017-03-27 14:51:50,106 easyblock.py:2290 INFO Running method build_step part of step build | |
| == 2017-03-27 14:51:50,106 run.py:137 DEBUG run_cmd: running cmd cp config/generic.mpi.linux.mk arch.mk && make -j 16 all-flavors COMPFLAG=-DINTEL PARAFLAG="-DMPI -DOMP" DEBUGFLAG="" F90free="$MPIF90 -free" LINK="$MPIF90" FOPTS="$FFLAGS -qopenmp" MOD_OPT="-module " C_PARAFLAG="$PARAFLAG" CC_COMP="$MPICXX" C_COMP="$MPICC" C_LINK="$MPICXX" C_OPTS="$CFLAGS -qopenmp" MKLPATH="$MKLROOT" LAPACKLIB="$LIBLAPACK" BLACSDIR="$BLACS_LIB_DIR" BLACS="$LIBBLACS" SCALAPACKLIB="$LIBSCALAPACK" FFTWINCLUDE="$FFTW_INC_DIR" FFTWLIB="$MKLROOT/lib/intel64/libfftw2xf_double_intel.a" (in /tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0) | |
| == 2017-03-27 14:51:50,107 run.py:162 INFO running cmd: cp config/generic.mpi.linux.mk arch.mk && make -j 16 all-flavors COMPFLAG=-DINTEL PARAFLAG="-DMPI -DOMP" DEBUGFLAG="" F90free="$MPIF90 -free" LINK="$MPIF90" FOPTS="$FFLAGS -qopenmp" MOD_OPT="-module " C_PARAFLAG="$PARAFLAG" CC_COMP="$MPICXX" C_COMP="$MPICC" C_LINK="$MPICXX" C_OPTS="$CFLAGS -qopenmp" MKLPATH="$MKLROOT" LAPACKLIB="$LIBLAPACK" BLACSDIR="$BLACS_LIB_DIR" BLACS="$LIBBLACS" SCALAPACKLIB="$LIBSCALAPACK" FFTWINCLUDE="$FFTW_INC_DIR" FFTWLIB="$MKLROOT/lib/intel64/libfftw2xf_double_intel.a" | |
| == 2017-03-27 14:52:00,918 run.py:444 DEBUG cmd "cp config/generic.mpi.linux.mk arch.mk && make -j 16 all-flavors COMPFLAG=-DINTEL PARAFLAG="-DMPI -DOMP" DEBUGFLAG="" F90free="$MPIF90 -free" LINK="$MPIF90" FOPTS="$FFLAGS -qopenmp" MOD_OPT="-module " C_PARAFLAG="$PARAFLAG" CC_COMP="$MPICXX" C_COMP="$MPICC" C_LINK="$MPICXX" C_OPTS="$CFLAGS -qopenmp" MKLPATH="$MKLROOT" LAPACKLIB="$LIBLAPACK" BLACSDIR="$BLACS_LIB_DIR" BLACS="$LIBBLACS" SCALAPACKLIB="$LIBSCALAPACK" FFTWINCLUDE="$FFTW_INC_DIR" FFTWLIB="$MKLROOT/lib/intel64/libfftw2xf_double_intel.a" " exited with exitcode 2 and output: | |
| make clean | |
| make[1]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| cd Common && make clean | |
| cd bin && make clean | |
| cd library && make clean | |
| cd Epsilon && make clean | |
| cd Sigma && make clean | |
| cd BSE && make clean | |
| cd PlotXct && make clean | |
| cd MeanField && make clean | |
| cd NonLinearOptics && make clean | |
| cd Visual && make clean | |
| /bin/rm -f manual.html | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Common' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/bin' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| cd ../Common/qhull && make clean | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/library' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Epsilon' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Sigma' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/PlotXct' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/BSE' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/NonLinearOptics' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Visual' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| cd SAPO && make clean | |
| cd SIESTA && make clean | |
| cd ABINIT && make clean | |
| cd EPM && make clean | |
| cd PARATEC && make clean | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/bin' | |
| cd ESPRESSO && make clean | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/library' | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Epsilon' | |
| cd ICM && make clean | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/PlotXct' | |
| cd ../MeanField/spglib-1.0.9 && make clean | |
| cd Utilities && make clean | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Sigma' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Common/qhull' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Visual' | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/BSE' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/SIESTA' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ABINIT' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/NonLinearOptics' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/SAPO' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/EPM' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Common/qhull' | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Common' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ESPRESSO' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ICM' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/PARATEC' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/SIESTA' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/spglib-1.0.9' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/Utilities' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ABINIT' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/SAPO' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/EPM' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ESPRESSO' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ICM' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/PARATEC' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/spglib-1.0.9' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/Utilities' | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField' | |
| make[1]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| cp flavor_real.mk flavor.mk | |
| make all | |
| make[1]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make pre && make all_ | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make donkey && make common | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| ..o. | |
| .oxxo. | |
| .oxxxxo... | |
| oxxxxxxo. | |
| .oxxxxxxx. | |
| .ooooooxxo.. | |
| .oooooooxo.. | |
| .oooooxxo... | |
| .........oxooo...... | |
| ............................ | |
| ................................. | |
| .................................... | |
| . ..oo. .... .................................oooxxxxxxxo. | |
| .............oxxxx@ox@@@x@x.....................o...........ooooooooooxx. | |
| .o.........oox@x.oo........xxx@@............ooxxxxo..........ooooxxxxxoxo | |
| .x........x@xxo...............o@xxo........oxxx@@@xoooooooooooooooxxxo... | |
| .o......ox@@o..................oox@o.....ooxxx@xoooxxxxxxxoooooooooooo.... | |
| o..ooooo@@xoooo....ooo...........x@o.....ooxxxxo .oxxxxxxxxxxooooooo.... | |
| . .oooo@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@....ooooox. .oxx@@@@@xxoo........ | |
| .ooooxxxxxxxooooooxooooooooooooooxo...oooooxx. ..ox@xxxoo......... | |
| .ooooooxxxx@xoooooooooooooxxoooooooooooxxxxx. .oxxooooooooxxo. | |
| .oooooxxxxx@@@xxxxxxxxxxxxxxxxxxxxxxxxoxxxxo. .oxxxxxxxxo. | |
| ....oooxxxxx@@@xo..oxxx@@@@@@xxxxoxxoooooooxx. .oxxxoo.. | |
| .....ooxxxx@@xo. ........ .ooooooooxxo | |
| ..oooxxxx@@@o .oooooooxoo. | |
| ....oxooxxxxx. .ooo..oooo. | |
| .....o.ooxxxxxo. .oooooooxo. | |
| ......ooooxxxxxxo. .ooooooxoo.. | |
| ........ooxxxxxxxo.. .o....oxoo... | |
| .......ooooxxxxxxxo. ........oooo. | |
| .ooooooo..ooxxxxoooo. .........ooo... | |
| ..oxo...ooooxxxoooo.. .ooo......oooo... | |
| .ooooo....o. .oxxxoo....ooo.... | |
| .oooooo... ...ooooo...ooo.. | |
| ... .oo....... | |
| ....ooo... | |
| __ __ | |
| ______ [ | [ | ._____ _ _ | |
| |_ _ \ | | _ | | / ___ \| | | | | |
| | |_) | .---. _. _.| | / | .---. | | .---. _ _ / / \_|\ \ /\ / / | |
| | __'./ /__\\[ /`\_| '' < / /__\\ | |/ /__\\| \ | | | _____ \ \/ \/ / | |
| _| |__| | \__. | | | |`\ \ | \___. | || \___. \ \/ / \ \.___| | \ /\ / | |
| |_______/ \.__./[_] [__| \_] \.__./[___]\.__./ \ / \.____./ \/ \/ | |
| / / | |
| /_/ | |
| ************************* Building REAL flavor ************************** | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| cpp -C -I./Common -DINTEL -DMPI -DOMP -DUSESCALAPACK Common/nrtype.f90 > Common/nrtype.p.f | |
| cpp -C -I./Common -DINTEL -DMPI -DOMP -DUSESCALAPACK Common/intrinsics.f90 > Common/intrinsics.p.f | |
| mpiicc -I./Common -DINTEL -c -O2 -xHost -ftz -fp-speculation=safe -fp-model source -qopenmp Common/periodic_table.c -o Common/periodic_table.o | |
| mpiifort -free -I ./Common -I /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/include -c -O2 -xHost -ftz -fp-speculation=safe -fp-model source -qopenmp Common/intrinsics.p.f -o Common/intrinsics.o -module Common/ | |
| mpiifort -free -I ./Common -I /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/include -c -O2 -xHost -ftz -fp-speculation=safe -fp-model source -qopenmp Common/nrtype.p.f -o Common/nrtype.o -module Common/ | |
| <command-line>(1): warning #5117: Bad # preprocessor line | |
| <command-line>(1): warning #5117: Bad # preprocessor line | |
| # 1 "/usr/include/stdc-predef.h" 1 3 4 | |
| # 1 "/usr/include/stdc-predef.h" 1 3 4 | |
| -----------------------------------^ | |
| -----------------------------------^ | |
| /usr/include/stdc-predef.h(2): warning #5117: Bad # preprocessor line | |
| /usr/include/stdc-predef.h(2): warning #5117: Bad # preprocessor line | |
| # 1 "/usr/include/stdc-predef.h" 3 4 | |
| ---------------------------------^ | |
| # 1 "/usr/include/stdc-predef.h" 3 4 | |
| ---------------------------------^ | |
| /usr/include/stdc-predef.h(3): error #5082: Syntax error, found '/' when expecting one of: <LABEL> <END-OF-STATEMENT> ; TYPE INTEGER REAL COMPLEX BYTE CHARACTER CLASS DOUBLE ... | |
| /* Copyright (C) 1991-2012 Free Software Foundation, Inc. | |
| ^ | |
| /usr/include/stdc-predef.h(3): error #5082: Syntax error, found '/' when expecting one of: <LABEL> <END-OF-STATEMENT> ; TYPE INTEGER REAL COMPLEX BYTE CHARACTER CLASS DOUBLE ... | |
| /* Copyright (C) 1991-2012 Free Software Foundation, Inc. | |
| ^ | |
| /usr/include/stdc-predef.h(18): error #5145: Invalid blank/tab | |
| <http://www.gnu.org/licenses/>. */ | |
| /usr/include/stdc-predef.h(18): error #5145: Invalid blank/tab | |
| ----------------------------------^ | |
| <http://www.gnu.org/licenses/>. */ | |
| ----------------------------------^ | |
| /usr/include/stdc-predef.h(24): error #5145: Invalid blank/tab | |
| /usr/include/stdc-predef.h(24): error #5145: Invalid blank/tab | |
| include it implicitly at the start of every compilation. It must | |
| -----------------------------------------------------------^ | |
| include it implicitly at the start of every compilation. It must | |
| -----------------------------------------------------------^ | |
| /usr/include/stdc-predef.h(35): error #5143: Missing mandatory separating blank | |
| /usr/include/stdc-predef.h(35): error #5143: Missing mandatory separating blank | |
| /* wchar_t uses ISO/IEC 10646 (2nd ed., published 2011-03-15) / | |
| --------------------------------^ | |
| /* wchar_t uses ISO/IEC 10646 (2nd ed., published 2011-03-15) / | |
| --------------------------------^ | |
| /usr/include/stdc-predef.h(36): error #5145: Invalid blank/tab | |
| /usr/include/stdc-predef.h(36): error #5145: Invalid blank/tab | |
| Unicode 6.0. */ | |
| Unicode 6.0. */ | |
| ---------------^ | |
| ---------------^ | |
| /usr/include/stdc-predef.h(39): error #5145: Invalid blank/tab | |
| /usr/include/stdc-predef.h(39): error #5145: Invalid blank/tab | |
| /* We do not support C11 <threads.h>. */ | |
| /* We do not support C11 <threads.h>. */ | |
| -------------------------------------^ | |
| -------------------------------------^ | |
| /usr/include/stdc-predef.h(3): catastrophic error: Could not recover from previous syntax error | |
| /usr/include/stdc-predef.h(3): catastrophic error: Could not recover from previous syntax error | |
| compilation aborted for Common/nrtype.p.f (code 1) | |
| compilation aborted for Common/intrinsics.p.f (code 1) | |
| make[3]: *** [Common/nrtype_m.mod] Error 1 | |
| make[3]: *** Waiting for unfinished jobs.... | |
| make[3]: *** [Common/intrinsics_m.mod] Error 1 | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make[2]: *** [pre] Error 2 | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make[1]: *** [all] Error 2 | |
| make[1]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make: *** [all-flavors] Error 2 | |
| == 2017-03-27 14:52:00,989 build_log.py:156 ERROR EasyBuild crashed with an error (at ?:124 in __init__): cmd "cp config/generic.mpi.linux.mk arch.mk && make -j 16 all-flavors COMPFLAG=-DINTEL PARAFLAG="-DMPI -DOMP" DEBUGFLAG="" F90free="$MPIF90 -free" LINK="$MPIF90" FOPTS="$FFLAGS -qopenmp" MOD_OPT="-module " C_PARAFLAG="$PARAFLAG" CC_COMP="$MPICXX" C_COMP="$MPICC" C_LINK="$MPICXX" C_OPTS="$CFLAGS -qopenmp" MKLPATH="$MKLROOT" LAPACKLIB="$LIBLAPACK" BLACSDIR="$BLACS_LIB_DIR" BLACS="$LIBBLACS" SCALAPACKLIB="$LIBSCALAPACK" FFTWINCLUDE="$FFTW_INC_DIR" FFTWLIB="$MKLROOT/lib/intel64/libfftw2xf_double_intel.a" " exited with exitcode 2 and output: | |
| make clean | |
| make[1]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| cd Common && make clean | |
| cd bin && make clean | |
| cd library && make clean | |
| cd Epsilon && make clean | |
| cd Sigma && make clean | |
| cd BSE && make clean | |
| cd PlotXct && make clean | |
| cd MeanField && make clean | |
| cd NonLinearOptics && make clean | |
| cd Visual && make clean | |
| /bin/rm -f manual.html | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Common' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/bin' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| cd ../Common/qhull && make clean | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/library' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Epsilon' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Sigma' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/PlotXct' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/BSE' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/NonLinearOptics' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Visual' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| cd SAPO && make clean | |
| cd SIESTA && make clean | |
| cd ABINIT && make clean | |
| cd EPM && make clean | |
| cd PARATEC && make clean | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/bin' | |
| cd ESPRESSO && make clean | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/library' | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Epsilon' | |
| cd ICM && make clean | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/PlotXct' | |
| cd ../MeanField/spglib-1.0.9 && make clean | |
| cd Utilities && make clean | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Sigma' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Common/qhull' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Visual' | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/BSE' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/SIESTA' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ABINIT' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/NonLinearOptics' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/SAPO' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/EPM' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Common/qhull' | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/Common' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ESPRESSO' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ICM' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/PARATEC' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/SIESTA' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/spglib-1.0.9' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/Utilities' | |
| /bin/rm -f *.o *.p.f *~ core *__genmod.f90 *.a *.mod | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ABINIT' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/SAPO' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/EPM' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ESPRESSO' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/ICM' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/PARATEC' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/spglib-1.0.9' | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField/Utilities' | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0/MeanField' | |
| make[1]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| cp flavor_real.mk flavor.mk | |
| make all | |
| make[1]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make pre && make all_ | |
| make[2]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make donkey && make common | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| ..o. | |
| .oxxo. | |
| .oxxxxo... | |
| oxxxxxxo. | |
| .oxxxxxxx. | |
| .ooooooxxo.. | |
| .oooooooxo.. | |
| .oooooxxo... | |
| .........oxooo...... | |
| ............................ | |
| ................................. | |
| .................................... | |
| . ..oo. .... .................................oooxxxxxxxo. | |
| .............oxxxx@ox@@@x@x.....................o...........ooooooooooxx. | |
| .o.........oox@x.oo........xxx@@............ooxxxxo..........ooooxxxxxoxo | |
| .x........x@xxo...............o@xxo........oxxx@@@xoooooooooooooooxxxo... | |
| .o......ox@@o..................oox@o.....ooxxx@xoooxxxxxxxoooooooooooo.... | |
| o..ooooo@@xoooo....ooo...........x@o.....ooxxxxo .oxxxxxxxxxxooooooo.... | |
| . .oooo@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@....ooooox. .oxx@@@@@xxoo........ | |
| .ooooxxxxxxxooooooxooooooooooooooxo...oooooxx. ..ox@xxxoo......... | |
| .ooooooxxxx@xoooooooooooooxxoooooooooooxxxxx. .oxxooooooooxxo. | |
| .oooooxxxxx@@@xxxxxxxxxxxxxxxxxxxxxxxxoxxxxo. .oxxxxxxxxo. | |
| ....oooxxxxx@@@xo..oxxx@@@@@@xxxxoxxoooooooxx. .oxxxoo.. | |
| .....ooxxxx@@xo. ........ .ooooooooxxo | |
| ..oooxxxx@@@o .oooooooxoo. | |
| ....oxooxxxxx. .ooo..oooo. | |
| .....o.ooxxxxxo. .oooooooxo. | |
| ......ooooxxxxxxo. .ooooooxoo.. | |
| ........ooxxxxxxxo.. .o....oxoo... | |
| .......ooooxxxxxxxo. ........oooo. | |
| .ooooooo..ooxxxxoooo. .........ooo... | |
| ..oxo...ooooxxxoooo.. .ooo......oooo... | |
| .ooooo....o. .oxxxoo....ooo.... | |
| .oooooo... ...ooooo...ooo.. | |
| ... .oo....... | |
| ....ooo... | |
| __ __ | |
| ______ [ | [ | ._____ _ _ | |
| |_ _ \ | | _ | | / ___ \| | | | | |
| | |_) | .---. _. _.| | / | .---. | | .---. _ _ / / \_|\ \ /\ / / | |
| | __'./ /__\\[ /`\_| '' < / /__\\ | |/ /__\\| \ | | | _____ \ \/ \/ / | |
| _| |__| | \__. | | | |`\ \ | \___. | || \___. \ \/ / \ \.___| | \ /\ / | |
| |_______/ \.__./[_] [__| \_] \.__./[___]\.__./ \ / \.____./ \/ \/ | |
| / / | |
| /_/ | |
| ************************* Building REAL flavor ************************** | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make[3]: Entering directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| cpp -C -I./Common -DINTEL -DMPI -DOMP -DUSESCALAPACK Common/nrtype.f90 > Common/nrtype.p.f | |
| cpp -C -I./Common -DINTEL -DMPI -DOMP -DUSESCALAPACK Common/intrinsics.f90 > Common/intrinsics.p.f | |
| mpiicc -I./Common -DINTEL -c -O2 -xHost -ftz -fp-speculation=safe -fp-model source -qopenmp Common/periodic_table.c -o Common/periodic_table.o | |
| mpiifort -free -I ./Common -I /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/include -c -O2 -xHost -ftz -fp-speculation=safe -fp-model source -qopenmp Common/intrinsics.p.f -o Common/intrinsics.o -module Common/ | |
| mpiifort -free -I ./Common -I /user/home/gent/vsc400/vsc40023/eb_phanpyscratch/CO7/sandybridge/software/imkl/2017.1.132-iimpi-2017a/mkl/include -c -O2 -xHost -ftz -fp-speculation=safe -fp-model source -qopenmp Common/nrtype.p.f -o Common/nrtype.o -module Common/ | |
| <command-line>(1): warning #5117: Bad # preprocessor line | |
| <command-line>(1): warning #5117: Bad # preprocessor line | |
| # 1 "/usr/include/stdc-predef.h" 1 3 4 | |
| # 1 "/usr/include/stdc-predef.h" 1 3 4 | |
| -----------------------------------^ | |
| -----------------------------------^ | |
| /usr/include/stdc-predef.h(2): warning #5117: Bad # preprocessor line | |
| /usr/include/stdc-predef.h(2): warning #5117: Bad # preprocessor line | |
| # 1 "/usr/include/stdc-predef.h" 3 4 | |
| ---------------------------------^ | |
| # 1 "/usr/include/stdc-predef.h" 3 4 | |
| ---------------------------------^ | |
| /usr/include/stdc-predef.h(3): error #5082: Syntax error, found '/' when expecting one of: <LABEL> <END-OF-STATEMENT> ; TYPE INTEGER REAL COMPLEX BYTE CHARACTER CLASS DOUBLE ... | |
| /* Copyright (C) 1991-2012 Free Software Foundation, Inc. | |
| ^ | |
| /usr/include/stdc-predef.h(3): error #5082: Syntax error, found '/' when expecting one of: <LABEL> <END-OF-STATEMENT> ; TYPE INTEGER REAL COMPLEX BYTE CHARACTER CLASS DOUBLE ... | |
| /* Copyright (C) 1991-2012 Free Software Foundation, Inc. | |
| ^ | |
| /usr/include/stdc-predef.h(18): error #5145: Invalid blank/tab | |
| <http://www.gnu.org/licenses/>. */ | |
| /usr/include/stdc-predef.h(18): error #5145: Invalid blank/tab | |
| ----------------------------------^ | |
| <http://www.gnu.org/licenses/>. */ | |
| ----------------------------------^ | |
| /usr/include/stdc-predef.h(24): error #5145: Invalid blank/tab | |
| /usr/include/stdc-predef.h(24): error #5145: Invalid blank/tab | |
| include it implicitly at the start of every compilation. It must | |
| -----------------------------------------------------------^ | |
| include it implicitly at the start of every compilation. It must | |
| -----------------------------------------------------------^ | |
| /usr/include/stdc-predef.h(35): error #5143: Missing mandatory separating blank | |
| /usr/include/stdc-predef.h(35): error #5143: Missing mandatory separating blank | |
| /* wchar_t uses ISO/IEC 10646 (2nd ed., published 2011-03-15) / | |
| --------------------------------^ | |
| /* wchar_t uses ISO/IEC 10646 (2nd ed., published 2011-03-15) / | |
| --------------------------------^ | |
| /usr/include/stdc-predef.h(36): error #5145: Invalid blank/tab | |
| /usr/include/stdc-predef.h(36): error #5145: Invalid blank/tab | |
| Unicode 6.0. */ | |
| Unicode 6.0. */ | |
| ---------------^ | |
| ---------------^ | |
| /usr/include/stdc-predef.h(39): error #5145: Invalid blank/tab | |
| /usr/include/stdc-predef.h(39): error #5145: Invalid blank/tab | |
| /* We do not support C11 <threads.h>. */ | |
| /* We do not support C11 <threads.h>. */ | |
| -------------------------------------^ | |
| -------------------------------------^ | |
| /usr/include/stdc-predef.h(3): catastrophic error: Could not recover from previous syntax error | |
| /usr/include/stdc-predef.h(3): catastrophic error: Could not recover from previous syntax error | |
| compilation aborted for Common/nrtype.p.f (code 1) | |
| compilation aborted for Common/intrinsics.p.f (code 1) | |
| make[3]: *** [Common/nrtype_m.mod] Error 1 | |
| make[3]: *** Waiting for unfinished jobs.... | |
| make[3]: *** [Common/intrinsics_m.mod] Error 1 | |
| make[3]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make[2]: *** [pre] Error 2 | |
| make[2]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make[1]: *** [all] Error 2 | |
| make[1]: Leaving directory `/tmp/vsc40023/easybuild_build/BerkeleyGW/1.2.0/intel-2017a/BerkeleyGW-1.2.0' | |
| make: *** [all-flavors] Error 2 | |
| (at easybuild/tools/run.py:449 in parse_cmd_output) | |
| == 2017-03-27 14:52:00,990 easyblock.py:2519 WARNING build failed (first 300 chars): cmd "cp config/generic.mpi.linux.mk arch.mk && make -j 16 all-flavors COMPFLAG=-DINTEL PARAFLAG="-DMPI -DOMP" DEBUGFLAG="" F90free="$MPIF90 -free" LINK="$MPIF90" FOPTS="$FFLAGS -qopenmp" MOD_OPT="-module " C_PARAFLAG="$PARAFLAG" CC_COMP="$MPICXX" C_COMP="$MPICC" C_LINK="$MPICXX" C_OPTS="$CFLAGS -qo | |
| == 2017-03-27 14:52:00,990 easyblock.py:276 INFO Closing log for application name BerkeleyGW version 1.2.0 |
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