bennewton999

---
creation date: <% tp.file.creation_date() %>
tags: DailyNote <% tp.file.title.split('-')[0] %>
---

modification date: <%+ tp.file.last_modified_date("dddd Do MMMM YYYY HH:mm:ss") %> // This doesn't currently work in front matter, hoping that gets fixed.

# <% tp.file.title %>

<< [[<% tp.date.now("YYYY-MM-DD", -1, tp.file.title, "YYYY-MM-DD") %>]] | [[<% tp.date.now("YYYY-MM-DD", 1, tp.file.title, "YYYY-MM-DD") %>]]>>

rchikhi

Wheeler graphs

Gagie, Manzini, Siren
Theoretical Computer Science, 2017
https://www.sciencedirect.com/science/article/pii/S0304397517305285

Notes of a whiteboard presentation to the Bonsai team in Lille.
These notes largely follow the paper.
Rayan Chikhi, 2019

ckandoth

Ensembl's VEP (Variant Effect Predictor) is popular for how it picks a single effect per gene as detailed here, its CLIA-compliant HGVS variant format, and Sequence Ontology nomenclature for variant effects.

To follow these instructions, we'll assume you have these packaged essentials installed:

## For Debian/Ubuntu system admins ##
sudo apt-get install -y build-essential git libncurses-dev

## For RHEL/CentOS system admins ##
sudo yum groupinstall -y 'Development Tools'
sudo yum install -y git ncurses-devel

squidpickles

Multiplatform (amd64 and arm) Kubernetes cluster setup

The official guide for setting up Kubernetes using kubeadm works well for clusters of one architecture. But, the main problem that crops up is the kube-proxy image defaults to the architecture of the master node (where kubeadm was run in the first place).

This causes issues when arm nodes join the cluster, as they will try to execute the amd64 version of kube-proxy, and will fail.

It turns out that the pod running kube-proxy is configured using a DaemonSet. With a small edit to the configuration, it's possible to create multiple DaemonSets—one for each architecture.

Steps

Follow the instructions at https://kubernetes.io/docs/setup/independent/create-cluster-kubeadm/ for setting up the master node. I've been using Weave Net as the network plugin; it see

TheHackerDev

What is a blockchain?

• Distributed ledger system; for tracking the transfer of tokens (currency, data of any type).
• A cross between economics, cryptography, and the internet.
  • Side note- if you ever wanted a financial incentive to get involved in cryptography, this is it.
• A blockchain is literally a chain of blocks, where each block contains a list of transactions that everyone agrees have occurred.
  • Each block builds upon all the ones before it.

ckandoth

Ensembl's VEP (Variant Effect Predictor) is popular for how it picks a single effect per gene as detailed here, its CLIA-compliant HGVS variant format, and Sequence Ontology nomenclature for variant effects.

To follow these instructions, we'll assume you have these packaged essentials installed:

## For Debian/Ubuntu system admins ##
sudo apt-get install -y build-essential git libncurses-dev

## For RHEL/CentOS system admins ##
sudo yum groupinstall -y 'Development Tools'
sudo yum install -y git ncurses-devel

keeferrourke

#!/bin/sh

# Written by: Keefer Rourke <https://krourke.org>
# Based on AUR package <https://aur.archlinux.org/cgit/aur.git/tree/PKGBUILD?h=ttf-google-fonts-git>

# dependancies: fonts-cantarell, ttf-ubuntu-font-family, git
sudo apt-get install fonts-cantarell ttf-ubuntu-font-family git
srcdir="/tmp/google-fonts"
pkgdir="/usr/share/fonts/truetype/google-fonts"
giturl="git://github.com/google/fonts.git"

thoolihan

sudo yum -y install epel-release
sudo yum -y install gcc gcc-c++ python-pip python-devel atlas atlas-devel gcc-gfortran openssl-devel libffi-devel
# use pip or pip3 as you prefer for python or python3
pip install --upgrade virtualenv
virtualenv --system-site-packages ~/venvs/tensorflow
source ~/venvs/tensorflow/bin/activate
pip install --upgrade numpy scipy wheel cryptography #optional
pip install --upgrade https://storage.googleapis.com/tensorflow/linux/cpu/tensorflow-0.10.0rc0-cp35-cp35m-linux_x86_64.whl
# or below if you want gpu, support, but cuda and cudnn are required, see docs for more install instructions
pip install --upgrade https://storage.googleapis.com/tensorflow/linux/gpu/tensorflow-0.10.0rc0-cp35-cp35m-linux_x86_64.whl

ryerh

注意：本文内容适用于 Tmux 2.3 及以上的版本，但是绝大部分的特性低版本也都适用，鼠标支持、VI 模式、插件管理在低版本可能会与本文不兼容。

Tmux 快捷键 & 速查表 & 简明教程

启动新会话：

tmux [new -s 会话名 -n 窗口名]

恢复会话：

vsouza

# Set variables in .bashrc file

# don't forget to change your path correctly!

export GOPATH=$HOME/golang
export GOROOT=/usr/local/opt/go/libexec
export PATH=$PATH:$GOPATH/bin
export PATH=$PATH:$GOROOT/bin