gidden

** Error in `/usr/bin/python': double free or corruption (fasttop): 0x00000000018a60e0 ***
======= Backtrace: =========
/lib/x86_64-linux-gnu/libc.so.6(+0x80996)[0x7ffff7875996]
/usr/lib/x86_64-linux-gnu/libstdc++.so.6(_ZNSsD1Ev+0x1f)[0x7ffff0e8405f]
/home/gidden/work/xdress/tests/cppproj/install-gccxml/lib/python2.7/site-packages/cppproj/pybasics.so(_ZN7cppproj18SomeCrazyPairValueD1Ev+0x18)[0x7fffef57807e]
/home/gidden/work/xdress/tests/cppproj/install-gccxml/lib/python2.7/site-packages/cppproj/pybasics.so(_ZNSt4pairIiN7cppproj18SomeCrazyPairValueEED1Ev+0x1c)[0x7fffef57809c]
/home/gidden/work/xdress/tests/cppproj/install-gccxml/lib/python2.7/site-packages/cppproj/pybasics.so(_ZN7cppproj7TClass2IfED1Ev+0x2d)[0x7fffef579265]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c071)[0x7ffff7831071]
/lib/x86_64-linux-gnu/libc.so.6(+0x3c0f5)[0x7ffff78310f5]
/usr/bin/python[0x4189b9]

gidden

# This is a "normal" job.
universe = vanilla

# If any information about this submission is written
# as output to standard output or standard error,
# where should it be saved?
output = process.out
error = process.err

# Where to write a log of your jobs' statuses.

gidden

import numpy as np
import tables as t
import uuid

id = uuid.uuid4()
h5file = t.open_file(".tmp{0}".format(id), mode='w',)
dtype = np.dtype([('id', (np.void, 16))])
h5file.create_table(h5file.root, "hi", dtype)

gidden

UUID with max number of arc: 8200a48be1384daaa150177f1a57fbc9 (189540 arcs)

Coin0506I Presolve 10664 (-10486) rows, 104064 (-85566) columns and 301482 (-455148) elements
Clp0006I 0  Obj 0 Primal inf 5459.3801 (90)
Clp0006I 278  Obj 3546.3574 Primal inf 1115.8705 (395)
Clp0006I 556  Obj 3547.8921 Primal inf 639.72194 (242)
Clp0006I 834  Obj 3549.2624 Primal inf 122.41827 (63)
Clp0006I 888  Obj 3549.3124
Clp0000I Optimal - objective value 3549.3124
Coin0511I After Postsolve, objective 3549.3124, infeasibilities - dual 1.1480397 (155), primal 0 (0)

gidden

Found an entry named np that is unknown to the parser.
12 possible (not validated) samplers found from input run control
Preparing input database
Converting 12 instances
         5951401 function calls (5945665 primitive calls) in 8.094 seconds

   Ordered by: internal time

   ncalls  tottime  percall  cumtime  percall filename:lineno(function)
       12    2.089    0.174    3.798    0.316 params.py:485(populate_params)

gidden

This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by Clp configure trunk, which was
generated by GNU Autoconf 2.59.  Invocation command line was

  $ ../../Clp/configure --prefix=/home/gidden/software/coin-Cbc-trunk/build --cache-file=/dev/null --srcdir=../../Clp

## --------- ##
## Platform. ##

gidden

/// An event handler that records the time that a better solution is found                                                                                     
class ObjValueHandler: public CbcEventHandler {
 public:
  ObjValueHandler(double obj, double time, bool found)
    : obj_(obj),
      time_(time),
      found_(found) {};

  explicit ObjValueHandler(double obj)
    : obj_(obj),

gidden

Linking CXX executable ../bin/cyclus
Undefined symbols for architecture x86_64:
  "boost::program_options::to_internal(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)", referenced from:
      std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > > > boost::program_options::to_internal<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > >(std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > > > const&) in cyclus.cc.o
  "boost::program_options::invalid_option_value::invalid_option_value(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)", referenced from:
      void boost::program_op

gidden

matthews-air:cyclus gidden$ ./install.py -j 4
/opt/local/bin/cmake
-- The C compiler identification is AppleClang 5.1.0.5030040
-- The CXX compiler identification is AppleClang 5.1.0.5030040
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works

gidden

configure: creating cache config.cache
checking build system type... i386-apple-darwin13.2.0
checking whether we want to compile in debug mode... no
checking for xlc_r... no
checking for xlc... no
checking for cc... cc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...