Hannes Bretschneider hannes-brt
hannes-brt
/ decode_cossmo_example.py
Last active
April 26, 2018 11:02
Function to decode a COSSMO training example in tfrecord format
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| def read_single_cossmo_example(serialized_example, n_tissues=1, coord_sys='rna1'): | |
| """Decode a single COSSMO example | |
| coord_sys must be one of 'rna1' or 'dna0', if 'dna0' then an extra 'strand' field | |
| must exist in the tfrecord and is extracted. | |
| """ | |
| assert coord_sys in ['dna0', 'rna1'] | |
| context_features = { |
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| # Copyright 2019 Hannes Bretschneider | |
| # | |
| # Permission is hereby granted, free of charge, to any person | |
| # obtaining a copy of this software and associated documentation | |
| # files (the "Software"), to deal in the Software without | |
| # restriction, including without limitation the rights to use, | |
| # copy, modify, merge, publish, distribute, sublicense, and/or sell | |
| # copies of the Software, and to permit persons to whom the | |
| # Software is furnished to do so, subject to the following | |
| # conditions: |
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