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genome size, coding genes in fungi
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# datasets from 1KFG genomes - http://1000.fungalgenomes.org | |
dat <-read.csv("genome_stats.csv",header=T,sep="\t",row.names=1) | |
summary(dat) | |
pdf("genome_size_gene_stat.pdf") | |
#boxplot(dat$genome,main="Genome Size") | |
#boxplot(dat$CDS,main="CDS count") | |
plot(dat$genome,dat$CDS,main="Fungal genome size vs CDS count (N=338)",xlab="Genome Size",ylab="Gene count") | |
png("genome_size_gene_stat.png") | |
plot(dat$genome,dat$CDS,main="Fungal genome size vs CDS count (N=338)",xlab="Genome Size",ylab="Gene count") | |
fit <- lm(formula = dat$genome ~ dat$CDS) | |
summary(fit) | |
summary(fit)$r.squared | |
cor(dat$genome, dat$CDS)**2 | |
summary(dat) |
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Species | genome | CDS | |
---|---|---|---|
Acarospora_strigata_CBS_132363.v0_2 | 26.83486 | 9130 | |
Acidomyces_richmondensis_BFW.Aciri1_iso | 29.88357 | 11202 | |
Acremonium_alcalophilum.Acral2.v2 | 54.417234 | 9521 | |
Agaricostilbum_hyphaenes_ATCC_MYA-4628.Agahy1.v1 | 17.894169 | 7746 | |
Agaricus_bisporus_var_bisporus_H97.Agabi_varbisH97_2.v2 | 30.233745 | 10438 | |
Ajellomyces_capsulatus_NAm1 | 32.782735 | 9389 | |
Allomyces_macrogynus_ATCC_38327.v3 | 57.060573 | 19446 | |
Amanita_muscaria_Koide.Amamu1.v1 | 40.699759 | 18153 | |
Amanita_thiersii_Skay4041.Amath1.v1 | 33.68922 | 10354 | |
Amniculicola_lignicola_CBS_123094.Amnli1.v1 | 49.576578 | 15590 | |
Amorphotheca_resinae_ATCC_22711.Amore1.v1 | 28.632928 | 9642 | |
Anthostoma_avocetta_NRRL_3190.Antav1.v1 | 56.234513 | 15755 | |
Antonospora_locustae_HM-2013.Antlo1 | 6.07486 | 2606 | |
Apiospora_montagnei_NRRL_25634.Apimo1.v1 | 47.671174 | 16992 | |
Aplosporella_prunicola_CBS_121.167.Aplpr1.v1 | 32.818685 | 12579 | |
Aporpium_caryae_L-13461.Elmca1 | 39.532937 | 16571 | |
Archaeorhizomyces_borealis_CBS_138755.v1 | 18.171825 | 8206 | |
Archaeorhizomyces_finlayi_CBS_128710.v2 | 22.539405 | 9471 | |
Armillaria_mellea_DSM_3731.Armme1_1 | 79.545241 | 14473 | |
Arthrobotrys_oligospora_ATCC_24927.Artol1 | 40.072829 | 11479 | |
Arthroderma_benhamiae_CBS_112371 | 22.180115 | 8027 | |
Artolenzites_elegans_CIRM1663.Artel1.v1 | 33.075802 | 12851 | |
Ascobolus_immersus_RN42.Ascim1.v1 | 59.529874 | 17877 | |
Ascocoryne_sarcoides_NRRL_50072.Ascsa1 | 34.170264 | 10672 | |
Ascodesmis_nigricans_CBS_389.68.Ascni1.v1 | 27.385218 | 9622 | |
Ascosphaera_apis_ARSEF_7405.v1 | 19.938029 | 7045 | |
Ashbya_gossypii_FDAG1 | 9.142809 | 5396 | |
Aspergillus_fumigatus_Af293 | 29.384958 | 9864 | |
Aspergillus_niger_ATCC_1015.Aspni7.v4 | 34.853277 | 11910 | |
Atractiellales_sp_PMI_95.Atrsp2.v2 | 51.470471 | 17606 | |
Aulographum_hederae_CBS_113979.Aulhe2.v2 | 31.983478 | 12127 | |
Aureobasidium_pullulans_var_pullulans_EXF-150.Aurpu_var_pul1 | 29.621078 | 11866 | |
Auricularia_subglabra_TFB10046_SS-5.Aurde3_1.v2 | 76.853599 | 25459 | |
Auriscalpium_vulgare_FP105234-Sp.Aurvu1.v1 | 39.647923 | 16945 | |
Backusella_circina_FSU_941.Bacci1.v1 | 48.648288 | 17039 | |
Batrachochytrium_dendrobatidis_JAM81.Batde5.v1 | 24.315081 | 8732 | |
Baudoinia_compniacensis_UAMH_10762.Bauco1.v1 | 21.876451 | 10513 | |
Beauveria_bassiana_ARSEF_2860.Beaba1 | 33.693936 | 10364 | |
Bimuria_novae-zelandiae_CBS_107.79.Bimnz1.v1 | 78.183505 | 16681 | |
Bjerkandera_adusta_HHB-12826-SP_SB-22.Bjead1_1.v1 | 42.7303 | 15473 | |
Blastobotrys_adeninivorans_LS3.Arxad1 | 11.804616 | 6119 | |
Blumeria_graminis_f_sp_hordei_DH14.Blugr1 | 118.72617 | 6470 | |
Boletus_edulis_BED1.Boled1.v1 | 46.637611 | 16933 | |
Botryobasidium_botryosum_FD-172_SS1.Botbo1.v1 | 46.674321 | 16526 | |
Botryosphaeria_dothidea_CBS_115476.Botdo1_1 | 43.500615 | 14998 | |
Botrytis_cinerea_B05.10 | 42.307476 | 16583 | |
Byssothecium_circinans_CBS_675.92.Bysci1.v1 | 49.288729 | 15785 | |
Cadophora_sp_DSE1049.Cadsp1.v1 | 70.459101 | 22766 | |
Caliciopsis_orientalis_CBS_138_64.v1 | 28.171555 | 7588 | |
Calocera_cornea_HHB12733.Calco1.v1 | 33.244933 | 13177 | |
Calosphaeria_pulchella | 37.801971 | 9570 | |
Candida_albicans_SC5314.vA22-s05-m05-r09 | 28.606295 | 6201 | |
Capronia_coronata_CBS_617.96 | 25.806497 | 9234 | |
Catenaria_anguillulae_PL171.Catan1.v1 | 36.224255 | 14188 | |
Cenococcum_geophilum_1.58.Cenge3.v2 | 177.55716 | 14748 | |
Cephaloascus_albidus_ATCC_66658.Cepal1_1.v1 | 15.275007 | 6196 | |
Chaetomium_globosum_CBS_148.51 | 34.272425 | 11232 | |
Chaetosphaeria_innumera | 37.690963 | 10703 | |
Chalara_longipes_BDJ.Chalo1.v1 | 52.432785 | 19765 | |
Chionosphaera_apobasidialis_52639.Chiap1.v1 | 21.830827 | 9875 | |
Choiromyces_venosus_120613-1.Chove1.v1 | 126.035033 | 17986 | |
Cladonia_grayi_Cgr-DA2myc-ss.Clagr3.v2 | 34.622149 | 11389 | |
Cladosporium_fulvum_CBS_131901.Clafu1.v1 | 61.113266 | 14127 | |
Cladosporium_sphaerospermum_UM_843 | 26.690478 | 8807 | |
Clathrospora_elynae_CBS_161.51.Clael1.v1 | 37.38895 | 13617 | |
Claviceps_purpurea_20.1 | 32.091443 | 8823 | |
Clavicorona_pyxidata_HHB10654.Clapy1.v1 | 37.987417 | 15130 | |
Clavispora_lusitaniae_ATCC_42720 | 12.114892 | 6151 | |
Clavulina_sp_PMI_390.ClaPMI390.v1 | 41.635769 | 15452 | |
Clonostachys_rosea_CBS_125111.Cloro1.v1 | 52.435476 | 18639 | |
Coccidioides_immitis_RS | 28.889001 | 10565 | |
Cochliobolus_heterostrophus_C5 | 36.439553 | 13440 | |
Coemansia_reversa_NRRL_1564.Coere1.v1 | 21.838014 | 7347 | |
Colletotrichum_graminicola_M1.001.Colgr1 | 51.604658 | 12006 | |
Colletotrichum_higginsianum_IMI_349063.Colhi1 | 49.084868 | 16172 | |
Conidiobolus_coronatus_NRRL_28638.Conco1.v1 | 39.903661 | 10635 | |
Coniochaeta_ligniaria_CBS_111746 | 43.695863 | 10083 | |
Coniophora_puteana_RWD-64-598_SS2.Conpu1.v1 | 42.968544 | 13761 | |
Coprinopsis_cinerea_okayama7_130 | 36.180177 | 13661 | |
Cordyceps_militaris_CM01.Cormi1 | 32.268578 | 9651 | |
Corollospora_maritima_CBS_119819.Corma2.v2 | 36.970979 | 12991 | |
Cortinarius_glaucopus_AT_2004_276.Corgl3.v2 | 63.450306 | 20377 | |
Corynespora_cassiicola_CCP.Corca1.v1 | 44.846156 | 17166 | |
Cryphonectria_parasitica_EP155.Crypa2.v2 | 43.870411 | 11609 | |
Cryptococcus_neoformans_var._neoformans_JEC21 | 19.051922 | 7078 | |
Cucurbitaria_berberidis_CBS_394.84.Cucbe1.v1 | 32.905402 | 12439 | |
Cyberlindnera_jadinii_NRRL_Y-1542.Cybja1.v1 | 13.018415 | 6038 | |
Cylindrobasidium_torrendii_FP15055_ss-10.Cylto1.v1 | 31.574086 | 13940 | |
Cyphellophora_europaea_CBS_101466 | 28.778935 | 11152 | |
Dacryopinax_sp_DJM-731_SS1.Dacsp1.v1 | 29.503487 | 10242 | |
Daldinia_eschscholzii_EC12.DalEC12_1.v1 | 37.551009 | 11173 | |
Debaryomyces_hansenii_CBS_767 | 12.181948 | 6541 | |
Dekkera_bruxellensis_CBS_2499.Dekbr2.v2 | 13.385232 | 5636 | |
Delitschia_confertaspora_ATCC_74209.Delco1.v1 | 31.159062 | 10171 | |
Dendrothele_bispora_CBS_962.96.Denbi1.v1 | 130.650616 | 33645 | |
Dibaeis_baeomyces.v0_1 | 35.272919 | 12729 | |
Dichomitus_squalens_LYAD-421_SS1.Dicsq1.v1 | 42.74843 | 12290 | |
Didymella_exigua_CBS_183.55.Didex1.v1 | 34.389227 | 12394 | |
Dissoconium_aciculare_CBS_342.82.Disac1.v1 | 26.537235 | 10299 | |
Dothidotthia_symphoricarpi_CBS_119687.Dotsy1.v1 | 34.433519 | 11790 | |
Dothistroma_septosporum_NZE10.Dotse1.v1 | 30.209431 | 12580 | |
Encephalitozoon_cuniculi_GB-M1.Enccu1 | 2.497519 | 1996 | |
Encephalitozoon_hellem_ATCC_50504.Enche1 | 2.251784 | 1847 | |
Encephalitozoon_intestinalis_ATCC_50506.Encin1 | 2.216898 | 1833 | |
Encephalitozoon_romaleae_SJ-2008.Encro1 | 2.187595 | 1831 | |
Endocarpon_pallidulum_Enpa.v0_1 | 41.444434 | 11601 | |
Enterocytozoon_bieneusi_H348.Entbi1 | 3.860738 | 3632 | |
Epichloe_festucae_E894.vM3 | 34.229844 | 9904 | |
Eremomyces_bilateralis_CBS_781.70.Erebi1.v1 | 26.864015 | 9881 | |
Eutypa_lata_UCREL1.v1 | 51.594623 | 11667 | |
Exidia_glandulosa_HHB12029.Exigl1.v1 | 78.171509 | 26765 | |
Exobasidium_vaccinii_MPITM.Exova1.v1 | 16.990195 | 7453 | |
Exophiala_dermatitidis_NIH_UT8656 | 26.376767 | 9648 | |
Fibroporia_radiculosa_TFFH_294 | 28.325165 | 9262 | |
Fibulorhizoctonia_sp_CBS_109695.Fibsp1.v1 | 95.125689 | 32946 | |
Fistulina_hepatica_ATCC_64428.Fishe1.v1 | 33.847808 | 11244 | |
Fomitiporia_mediterranea_MF3-22.Fomme1.v1 | 63.35442 | 11333 | |
Fomitopsis_pinicola_FP-58527_SS1.Fompi3.v3 | 41.614358 | 13885 | |
Fusarium_fujikuroi_IMI58289 | 43.832314 | 14946 | |
Fusarium_graminearum_PH-1 | 36.354132 | 11673 | |
Galerina_marginata_CBS_339.88.Galma1.v1 | 59.418196 | 21461 | |
Ganoderma_sp_10597_SS1.Gansp1.v1 | 39.522573 | 12910 | |
Glarea_lozoyensis_74030 | 39.509734 | 13094 | |
Gloeophyllum_trabeum_ATCC_11539.Glotr1_1.v1 | 37.181821 | 11846 | |
Glomerella_cingulata_23.Gloci1.v1 | 58.838139 | 18975 | |
Glonium_stellatum.Glost2.v1 | 40.521621 | 14362 | |
Gonapodya_prolifera_JEL478.Ganpr1.v1 | 48.794828 | 13902 | |
Graphis_scripta_CBS_132367.v0_1 | 36.224679 | 13065 | |
Grosmannia_clavigera_kw1407 | 28.807304 | 8312 | |
Gymnascella_aurantiaca.Gymau1.v1 | 25.350464 | 9106 | |
Gymnascella_citrina_NRRL_5970.Gymci1_1.v1.1 | 25.160636 | 9779 | |
Gymnopus_luxurians.Gymlu1.v1 | 66.28168 | 22057 | |
Gyrodon_lividus_BX.Gyrli1.v1 | 43.048674 | 11779 | |
Hebeloma_cylindrosporum_h7.Hebcy2.v2 | 38.226047 | 15382 | |
Hesseltinella_vesiculosa_NRRL_3301.Hesve1.v1 | 25.857576 | 10675 | |
Heterobasidion_annosum_TC_32-1.Hetan2.v2 | 33.649967 | 13405 | |
Heterogastridium_pycnidioideum_ATCC_MYA-4631.Hetpy1.v1 | 17.579447 | 7658 | |
Homoloaphlyctis_polyrhiza_JEL142.v2 | 21.324754 | 7123 | |
Hortaea_werneckii_EXF-2000.v2_M0 | 49.942992 | 15748 | |
Hydnomerulius_pinastri.Hydpi2.v2 | 38.278792 | 13270 | |
Hymenoscyphus_fraxineus_KW1.v1 | 63.127076 | 10405 | |
Hypholoma_sublateritium.Hypsu1.v1 | 48.031814 | 17911 | |
Hysterium_pulicare_CBS_123377.Hyspu1_1 | 38.427427 | 12352 | |
Ilyonectria_sp_PMI-82.Ilysp1.v1 | 63.663791 | 22250 | |
Jaapia_argillacea_MUCL_33604.Jaaar1.v1 | 45.045919 | 16419 | |
Jaminaea_sp_MCA_5214.Jamsp1.v1 | 16.615586 | 6858 | |
Karstenula_rhodostoma_CBS_690.94.Karrh1.v1 | 45.074449 | 15043 | |
Kazachstania_africana_CBS_2517 | 11.13014 | 5670 | |
Kluyveromyces_lactis_NRRL_Y-1140 | 10.689156 | 5348 | |
Komagataella_pastoris_GS115 | 9.216378 | 5041 | |
Kuraishia_capsulata_CBS_1993 | 11.371246 | 6029 | |
Laccaria_amethystina_LaAM-08-1.Lacam1.v1 | 52.197432 | 21066 | |
Laccaria_bicolor_S238N-H82.Lacbi2.v2 | 60.70705 | 23130 | |
Lentinus_tigrinus_ALCF2SS1-6.Lenti6_1.v1 | 39.878053 | 15581 | |
Lentithecium_fluviatile_CBS_122367.Lenfl1.v1 | 54.688705 | 16742 | |
Lepidopterella_palustris.Leppa1.v1 | 45.668136 | 13870 | |
Leptosphaeria_maculans_JN3 | 44.593273 | 12472 | |
Leucogyrophana_mollusca_KUC20120723A-06.Leumo1.v1 | 35.193237 | 14619 | |
Lichtheimia_corymbifera_FSU_9682 | 33.525905 | 13551 | |
Lichtheimia_hyalospora_FSU_10163.Lichy1.v1 | 33.282407 | 12062 | |
Lodderomyces_elongisporus_NRRL_YB-4239 | 15.505741 | 5907 | |
Lophiostoma_macrostomum_CBS_122681.Lopma1.v1 | 42.577411 | 16160 | |
Lophium_mytilinum_CBS_269.34.Lopmy1.v1 | 43.412209 | 15153 | |
Loramyces_juncicola_46458.Lorju1.v1 | 42.67992 | 14372 | |
Macrolepiota_fuliginosa.Macfu1.v1 | 46.396944 | 15801 | |
Magnaporthe_oryzae_70-15 | 40.491973 | 13074 | |
Malassezia_globosa | 8.930003 | 4283 | |
Marssonina_brunnea_f._sp._multigermtubi_MB_m1 | 51.602456 | 10035 | |
Meira_miltonrushii_CBS_12591.Meimi1.v1 | 17.383515 | 7452 | |
Melampsora_laricis-populina_98AG31.Mellp1.v1 | 101.129028 | 16399 | |
Melanconium_sp_NRRL_54901.Melsp1.v1 | 58.516921 | 16656 | |
Melanomma_pulvis-pyrius_CBS_109.77.Melpu1.v1 | 42.094923 | 15881 | |
Meliniomyces_bicolor_E.Melbi2.v2 | 82.384847 | 18619 | |
Meliniomyces_variabilis_F.Melva1.v1 | 55.857776 | 20389 | |
Metarhizium_anisopliae_ARSEF_23 | 39.061713 | 10729 | |
Metschnikowia_fructicola_277 | 24.482224 | 7362 | |
Meyerozyma_guilliermondii_ATCC_6260 | 10.609954 | 6067 | |
Microascus_trigonosporus_CBS_218.31.Mictr1.v1 | 36.100005 | 13087 | |
Microbotryum_violaceum_p1A1_Lamole | 25.212987 | 7818 | |
Millerozyma_farinosa_CBS_7064 | 21.459642 | 11587 | |
Mixia_osmundae_IAM_14324.Mixos1.v1 | 13.634488 | 6903 | |
Monacrosporium_haptotylum_CBS_200.50.Monha1 | 39.53192 | 10959 | |
Monascus_purpureus_NRRL_1596.Monpu1.v1 | 23.439871 | 8918 | |
Monascus_ruber_NRRL_1597.Monru1.v1 | 24.798814 | 9650 | |
Morchella_conica_CCBAS932.Morco1.v1 | 48.213273 | 11600 | |
Mortierella_elongata.Morel1.v1 | 49.959475 | 15976 | |
Mortierella_verticillata_NRRL_6337 | 41.906935 | 12880 | |
Mucor_circinelloides_CBS277.49.Mucci2.v2 | 36.587022 | 11719 | |
Mutinus_elegans_ME.BST.Mutel1.v1 | 52.778615 | 14626 | |
Myceliophthora_thermophila_ATCC_42464.Spoth2.v2 | 38.744216 | 9110 | |
Mycosphaerella_fijiensis_CIRAD86.Mycfi2.v2 | 74.141167 | 13107 | |
Mycosphaerella_graminicola_IPO323.Mycgr3.v2 | 39.686251 | 10952 | |
Myriangium_duriaei_CBS_260.36.Myrdu1.v1 | 25.685045 | 10685 | |
Naiadella_fluitans_ATCC_64713.Naifl1.v1 | 52.667713 | 13270 | |
Nakaseomyces_bacillisporus_CBS_7720 | 11.106681 | 5528 | |
Nakaseomyces_delphensis_CBS_2170 | 10.969104 | 5414 | |
Nectria_haematococca_FGSC_9596 | 51.080488 | 15718 | |
Nematocida_parisii_ERTm1.Nempa1 | 4.071346 | 2661 | |
Neolecta_irregularis_DAH-1.v1 | 14.591686 | 6674 | |
Neolentinus_lepideus_HHB14362_ss-1.Neole1.v1 | 35.640188 | 13164 | |
Neurospora_crassa_OR74A | 38.368508 | 10249 | |
Niesslia_exilis_CBS_358.70.Nieex1.v1 | 35.381739 | 13499 | |
Nosema_ceranae_BRL01.Nosce1 | 7.860219 | 2060 | |
Ogataea_parapolymorpha_DL-1 | 8.874589 | 5408 | |
Oidiodendron_maius_Zn.Oidma1.v1 | 46.426256 | 16703 | |
Omphalotus_olearius_VT_653.13.Ompol1 | 28.145093 | 8171 | |
Ophiostoma_piceae_UAMH_11346 | 32.762138 | 8884 | |
Ophiostoma_piliferum | 27.257965 | 6267 | |
Orpinomyces_sp_C1A.Orpsp1_1 | 100.954185 | 18936 | |
Paracoccidioides_brasiliensis_Pb18 | 29.866856 | 8521 | |
Patellaria_atrata_CBS_101060.Patat1.v1 | 28.693344 | 9794 | |
Paxillus_involutus_ATCC_200175.Paxin1.v1 | 58.301126 | 17968 | |
Penicillium_chrysogenum_Wisconsin_54-1255 | 32.223735 | 16597 | |
Periconia_macrospinosa_DSE2036.Perma1.v1 | 54.992973 | 18750 | |
Phaeoacremonium_aleophilum_UCRPA7.Phaal1 | 47.465449 | 8834 | |
Phanerochaete_chrysosporium.Phchr2.v2.2 | 35.149519 | 13602 | |
Phlebia_brevispora_HHB-7030_SS6.Phlbr1.v1 | 49.963746 | 16170 | |
Phlebiopsis_gigantea_11061_1_CR5-6.Phlgi1.v1 | 30.143925 | 11891 | |
Phycomyces_blakesleeanus_NRRL_1555.Phybl2.v2 | 53.939167 | 16528 | |
Pichia_kudriavzevii_SD108.v1 | 12.112596 | 5656 | |
Pichia_stipitis_CBS_6054.Picst3.v2 | 15.441079 | 5807 | |
Piedraia_hortae_CBS_480.64.Pieho1_1.v1.1 | 16.946159 | 7572 | |
Piloderma_croceum_F_1598.Pilcr1.v1 | 59.326866 | 21583 | |
Piriformospora_indica_DSM_11827.Pirin1 | 24.979981 | 11767 | |
Piromyces_sp_E2.PirE2_1.v1 | 71.019055 | 14648 | |
Pisolithus_tinctorius_Marx_270.Pisti1.v1 | 71.007534 | 22701 | |
Pleomassaria_siparia_CBS_279.74.Plesi1.v1 | 43.176591 | 13486 | |
Pleurotus_ostreatus_PC15.PleosPC15_2.v2 | 34.343005 | 12330 | |
Plicaturopsis_crispa_CBS_459.81.Plicr1.v1 | 34.498416 | 13626 | |
Pneumocystis_jirovecii_SE8 | 8.133318 | 3772 | |
Podospora_anserina_S_mat+.Podan2 | 35.010595 | 10588 | |
Polychaeton_citri_CBS_116435.Polci1.v1 | 27.207581 | 10582 | |
Polyplosphaeria_fusca_CBS_125425.Polfu1.v1 | 37.00977 | 15194 | |
Postia_placenta_MAD_698-R.PosplRSB12_1.v1 | 42.453726 | 12541 | |
Protomyces_inouyei | 12.201973 | 4306 | |
Pseudographis_elatina | 36.124988 | 9970 | |
Pseudogymnoascus_destructans_20631-21 | 29.486566 | 8947 | |
Pseudozyma_antarctica_T-34 | 18.061618 | 6657 | |
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3 | 88.170162 | 16424 | |
Puccinia_striiformis_f_sp_tritici_PST-130.Pucst1 | 64.782816 | 18021 | |
Punctularia_strigosozonata_HHB-11173_SS5 | 34.119636 | 11653 | |
Pyrenophora_tritici-repentis | 37.825929 | 12277 | |
Pyronema_confluens_CBS_100304.Pyrco1 | 50.026054 | 13367 | |
Ramaria_rubella_UT-36052-T.Ramac1.v1 | 105.462249 | 19287 | |
Rhizoctonia_solani_AG-1_IA | 34.529833 | 10084 | |
Rhizoctonia_solani_AG-1_IB.Rhiso1 | 47.658641 | 15157 | |
Rhizophagus_irregularis_DAOM_181602.Gloin1.v1 | 91.083792 | 30282 | |
Rhizopogon_salebrosus_TDB-379.Rhisa1.v1 | 82.288552 | 18900 | |
Rhizopogon_vinicolor_AM-OR11-026.Rhivi1.v1 | 36.10232 | 14469 | |
Rhizopus_delemar_RA_99-880 | 46.087117 | 17702 | |
Rhizopus_microsporus_var_chinensis_CCTCC_M201021.Rhich1 | 45.739792 | 17676 | |
Rhizopus_microsporus_var_microsporus_ATCC_52813.Rhimi1_1.v1 | 25.972395 | 10905 | |
Rhodosporidium_toruloides_NP11 | 20.20101 | 8170 | |
Rhodotorula_graminis_WP1.Rhoba1_1.v1.1 | 21.013998 | 7283 | |
Rhodotorula_minuta_MCA_4210.Rhomi1.v1 | 20.824934 | 7814 | |
Rhytidhysteron_rufulum_CBS_306.38.Rhyru1_1 | 40.184762 | 12117 | |
Rozella_allomycis_CSF55 | 11.247879 | 6023 | |
Saccharata_proteae_CBS_121410.Sacpr1.v1 | 31.432921 | 9234 | |
Saccharomyces_cerevisiae_S288C.vR64-2-1 | 12.157105 | 6713 | |
Saitoella_complicata_NRRL_Y-17804.Saico1.v1 | 14.136186 | 7034 | |
Saksenaea_vasiformis_B4078 | 42.502389 | 9387 | |
Sarcoscypha_coccinea_ATCC_58028.Sarco1.v1 | 39.089751 | 13738 | |
Schizophyllum_commune_H4-8.Schco3.v3 | 38.670379 | 16319 | |
Schizopora_paradoxa_KUC8140.Schpa1.v1 | 44.406206 | 17098 | |
Schizosaccharomyces_octosporus_yFS286 | 11.631856 | 5347 | |
Schizosaccharomyces_pombe_972h-.vASM294v2 | 12.631379 | 5144 | |
Scleroderma_citrinum_Foug_A.Sclci1.v1 | 56.144862 | 21012 | |
Sclerotinia_sclerotiorum_1980_UF-70 | 38.291501 | 14642 | |
Sebacina_vermifera_MAFF_305830.Sebve1.v1 | 38.094242 | 15312 | |
Serpula_lacrymans_S7.9.SerlaS7_9_2.v2 | 42.734799 | 12789 | |
Sistotremastrum_suecicum_HHB10207_ss-3.Sissu1.v1 | 33.857913 | 13657 | |
Sordaria_macrospora_k-hell | 37.238441 | 10131 | |
Spathaspora_passalidarum_NRRL_Y-27907.Spapa3.v2 | 13.182099 | 5983 | |
Spathularia_flavida | 35.673938 | 9077 | |
Sphaerobolus_stellatus_SS14.Sphst1.v1 | 176.372157 | 35274 | |
Sphaerulina_musiva_SO2202 | 29.235106 | 10232 | |
Spizellomyces_punctatus_DAOM_BR117.v1 | 24.131112 | 9424 | |
Sporisorium_reilianum_SRZ2.Spore1 | 18.386378 | 6648 | |
Sporobolomyces_linderae_CBS_7893.Spoli1.v1 | 18.244034 | 9062 | |
Sporobolomyces_roseus_CBS_119925.Sporo1.v1 | 21.172659 | 5536 | |
Sporormia_fimetaria.Spofi1.v1 | 25.892244 | 10783 | |
Stagonospora_nodorum_SN15.Stano2.v2 | 37.213987 | 12380 | |
Stereum_hirsutum_FP-91666_SS1.Stehi1.v1 | 46.511623 | 14072 | |
Suillus_brevipes.Suibr1.v1 | 51.712595 | 22453 | |
Suillus_luteus_UH-Slu-Lm8-n1.Suilu1.v1 | 37.014302 | 18316 | |
Symbiotaphrina_kochii_250.77.Symko1.v1 | 24.834845 | 10482 | |
Talaromyces_marneffei_ATCC_18224 | 28.227917 | 10928 | |
Talaromyces_stipitatus_ATCC_10500 | 34.886313 | 13503 | |
Taphrina_deformans | 13.131673 | 4672 | |
Terfezia_boudieri_S1.Terbo2.v1.1 | 63.234573 | 12114 | |
Testicularia_cyperi_MCA_3645.Tescy1.v1 | 20.778962 | 7069 | |
Tetrapisispora_phaffii_CBS_4417 | 12.10019 | 5476 | |
Thelebolus_stercoreus | 26.091195 | 6539 | |
Thermoascus_aurantiacus_ATCC26904.Theau1.v1 | 28.490209 | 8798 | |
Thermomyces_lanuginosus_SSBP | 19.155516 | 6241 | |
Thielavia_terrestris_NRRL_8126.Thite2.v2 | 36.912256 | 9813 | |
Thozetella_sp_PMI_491.ThoPMI491_1.v2 | 72.858336 | 23281 | |
Tilletiaria_anomala_UBC_951.Tilan2.v1 | 18.70401 | 6810 | |
Tolypocladium_inflatum_NRRL_8044.v1 | 30.348711 | 9998 | |
Torulaspora_delbrueckii_CBS_1146 | 9.220678 | 5179 | |
Tothia_fuscella_CBS_130266.Totfu1.v1 | 36.781754 | 13685 | |
Trametes_versicolor_FP-101664_SS1.Trave1.v1 | 44.794008 | 14296 | |
Trematosphaeria_pertusa_CBS_122368.Trepe1.v1 | 47.745773 | 17306 | |
Tremella_mesenterica_Fries.Treme1.v1 | 28.639919 | 8313 | |
Trichodelitschia_bisporula_CBS_262.69.Tribi1.v1 | 25.789561 | 10181 | |
Trichoderma_atroviride_IMI_206040.Triat2.v2 | 36.143664 | 11863 | |
Trichoderma_virens_Gv29-8.TriviGv29_8_2.v2 | 39.022666 | 12427 | |
Tricholoma_matsutake_945.Trima3.v3 | 175.759688 | 22885 | |
Trichophyton_rubrum_CBS_118892 | 22.382563 | 8812 | |
Trichosporon_asahii_var._asahii_CBS_8904 | 25.036094 | 9083 | |
Trichosporon_oleaginosus_IBC0246.Triol1.v1 | 19.835558 | 8322 | |
Trinosporium_guianense_CBS_132537.Trigu1.v1 | 24.228379 | 8062 | |
Tritirachium_sp_CBS_265.96.Trisp1.v1 | 18.890683 | 7254 | |
Trypethelium_eluteriae.Tryvi1.v1 | 32.160005 | 11858 | |
Tuber_melanosporum.Tubme1 | 124.945702 | 7496 | |
Tulasnella_calospora_AL13-4D.Tulca1.v1 | 62.392858 | 19659 | |
Umbelopsis_ramanniana_NRRL_5844.Umbra1.v1 | 23.077072 | 9931 | |
Uncinocarpus_reesii_1704 | 22.293479 | 7863 | |
Ustilago_maydis_521.v190413 | 19.667011 | 6788 | |
Verticillium_dahliae_JR2.Verda1.v1 | 33.828453 | 10535 | |
Volvariella_volvacea_V23.Volvo1 | 35.720033 | 11084 | |
Wallemia_ichthyophaga_EXF-994 | 9.622738 | 4990 | |
Wallemia_sebi_CBS_633.66.Walse1.v1 | 9.815586 | 5284 | |
Wilcoxina_mikolae_CBS_423.85.Wilmi1.v1 | 117.288895 | 13093 | |
Wolfiporia_cocos_MD-104_SS10.Wolco1.v1 | 50.483556 | 12746 | |
Xanthoria_parietina_46-1.Xanpa2.v1.1 | 31.900637 | 11065 | |
Xylona_heveae_TC161.Xylhe1.v1 | 24.337763 | 8205 | |
Yarrowia_lipolytica_CLIB122 | 20.550897 | 7222 | |
Zasmidium_cellare_ATCC_36951.Zasce1.v1 | 38.247703 | 16015 | |
Zopfia_rhizophila_CBS_207.26.Zoprh1.v1 | 152.781427 | 21730 | |
Zygosaccharomyces_rouxii_CBS_732 | 9.764635 | 5324 | |
Zymoseptoria_pseudotritici_STIR04_4.3.1.Zymps1 | 32.658572 | 11044 |
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