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@jakevdp
Created June 27, 2017 17:48
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Simple DataShader interactive demo with no external datasets
Display the source blob
Display the rendered blob
Raw
{
"cells": [
{
"cell_type": "markdown",
"metadata": {},
"source": [
"*Installation*\n",
"\n",
"```\n",
"conda install -c bokeh datashader\n",
"```"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"import datashader as ds\n",
"import datashader.transfer_functions as tf\n",
"import pandas as pd\n",
"import numpy as np"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"x = np.random.randn(10000000)\n",
"y = np.sin(5 * x) + np.cos(6 * x) + 0.1 * np.random.randn(len(x))\n",
"z = x ** 2 + y ** 2\n",
"df = pd.DataFrame({'x': x, 'y': y, 'z':z})"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"cvs = ds.Canvas(plot_width=400, plot_height=400)\n",
"agg = cvs.points(df, 'x', 'y')#, ds.mean('z'))\n",
"tf.shade(agg, cmap=['lightblue', 'darkblue'], how='log')"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"from bokeh.models import BoxZoomTool\n",
"from bokeh.plotting import figure, output_notebook, show\n",
"\n",
"output_notebook()\n",
"\n",
"x_range = (-5, 5)\n",
"y_range = (-5, 5)\n",
"\n",
"plot_width = int(750)\n",
"plot_height = int(plot_width//1.2)\n",
"\n",
"def base_plot(tools='pan,wheel_zoom,reset',plot_width=plot_width, plot_height=plot_height, **plot_args):\n",
" p = figure(tools=tools, plot_width=plot_width, plot_height=plot_height,\n",
" x_range=x_range, y_range=y_range, outline_line_color=None,\n",
" min_border=0, min_border_left=0, min_border_right=0,\n",
" min_border_top=0, min_border_bottom=0, **plot_args)\n",
" \n",
" p.axis.visible = False\n",
" p.xgrid.grid_line_color = None\n",
" p.ygrid.grid_line_color = None\n",
" \n",
" p.add_tools(BoxZoomTool(match_aspect=True))\n",
" \n",
" return p\n",
" \n",
"options = dict(line_color=None, fill_color='blue', size=5)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"samples = df.sample(n=1000)\n",
"p = base_plot()\n",
"p.circle(x=samples['x'], y=samples['y'], **options)\n",
"show(p)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": [
"import datashader as ds\n",
"from datashader import transfer_functions as tf\n",
"from datashader.colors import Greys9\n",
"Greys9_r = list(reversed(Greys9))[:-2]"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"cvs = ds.Canvas(plot_width=plot_width, plot_height=plot_height, x_range=x_range, y_range=y_range)\n",
"agg = cvs.points(df, 'x', 'y', ds.count('z'))\n",
"tf.shade(agg, cmap=[\"white\", 'darkblue'], how='linear')"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": [
"import datashader as ds\n",
"from datashader.bokeh_ext import InteractiveImage\n",
"from functools import partial\n",
"from datashader.utils import export_image\n",
"from datashader.colors import colormap_select, Greys9, Hot, viridis, inferno\n",
"from IPython.core.display import HTML, display\n",
"\n",
"background = \"black\"\n",
"export = partial(export_image, export_path=\"export\", background=background)\n",
"cm = partial(colormap_select, reverse=(background==\"black\"))\n",
"\n",
"def create_image(x_range, y_range, w=plot_width, h=plot_height):\n",
" cvs = ds.Canvas(plot_width=w, plot_height=h, x_range=x_range, y_range=y_range)\n",
" agg = cvs.points(df, 'x', 'y', ds.count('z'))\n",
" img = tf.shade(agg, cmap=Hot, how='eq_hist')\n",
" return tf.dynspread(img, threshold=0.5, max_px=4)\n",
"\n",
"p = base_plot(background_fill_color=background)\n",
"export(create_image(x_range, y_range),\"NYCT_hot\")\n",
"InteractiveImage(p, create_image)"
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {
"collapsed": true
},
"outputs": [],
"source": []
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3.6 + datashader",
"language": "python",
"name": "datashader"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.6.1"
}
},
"nbformat": 4,
"nbformat_minor": 2
}
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