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@grenade
grenade / 01-generate-ed25519-ssh-key.sh
Last active July 2, 2024 14:42
generate ed25519 ssh and gpg/pgp keys and set file permissions for ssh keys and config
#!/bin/bash
# generate new personal ed25519 ssh key
ssh-keygen -o -a 100 -t ed25519 -f ~/.ssh/id_ed25519 -C "rob thijssen <rthijssen@gmail.com>"
# generate new host cert authority (host_ca) ed25519 ssh key
# used for signing host keys and creating host certs
ssh-keygen -t ed25519 -f manta_host_ca -C manta.network
eval "$(ssh-agent -s)"
@stephenturner
stephenturner / deseq2-analysis-template.R
Created July 30, 2014 12:20
Template for analysis with DESeq2
## RNA-seq analysis with DESeq2
## Stephen Turner, @genetics_blog
# RNA-seq data from GSE52202
# http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=gse52202. All patients with
# ALS, 4 with C9 expansion ("exp"), 4 controls without expansion ("ctl")
# Import & pre-process ----------------------------------------------------
# Import data from featureCounts
@myusuf3
myusuf3 / delete_git_submodule.md
Created November 3, 2014 17:36
How effectively delete a git submodule.

To remove a submodule you need to:

  • Delete the relevant section from the .gitmodules file.
  • Stage the .gitmodules changes git add .gitmodules
  • Delete the relevant section from .git/config.
  • Run git rm --cached path_to_submodule (no trailing slash).
  • Run rm -rf .git/modules/path_to_submodule (no trailing slash).
  • Commit git commit -m "Removed submodule "
  • Delete the now untracked submodule files rm -rf path_to_submodule
@lukas-h
lukas-h / license-badges.md
Last active July 4, 2024 06:01
Markdown License Badges for your Project

Markdown License badges

Collection of License badges for your Project's README file.
This list includes the most common open source and open data licenses.
Easily copy and paste the code under the badges into your Markdown files.

Notes

  • The badges do not fully replace the license informations for your projects, they are only emblems for the README, that the user can see the License at first glance.

Translations: (No guarantee that the translations are up-to-date)

@gadenbuie
gadenbuie / join-animations-with-gganimate.R
Last active January 11, 2022 15:48
Animated dplyr joins with gganimate
# Animated dplyr joins with gganimate
# * Garrick Aden-Buie
# * garrickadenbuie.com
# * MIT License: https://opensource.org/licenses/MIT
# Note: I used Fira Sans and Fira Mono fonts.
# Use search and replace to use a different font if Fira is not available.
library(tidyverse)
library(gganimate)
---
title: "Presentation Ninja"
subtitle: "⚔<br/>with xaringan"
author: "Yihui Xie"
date: "2016/12/12 (updated: `r Sys.Date()`)"
output:
xaringan::moon_reader:
lib_dir: libs
css:
- default
@kennedymwavu
kennedymwavu / .Rprofile
Last active June 18, 2023 23:00
Customize R's startup msg on Rstudio
setHook("rstudio.sessionInit", function(newSession) {
cat('\f')
hour <- format(Sys.time(), format = '%H') |> as.numeric() |> as.character()
morning <- 0:11
afternoon <- 12:16
evening <- c(17:23)
day_hrs <- rep(