Created
February 7, 2024 06:12
-
-
Save jhamman/78d8c038d759805534218232e0a7863b to your computer and use it in GitHub Desktop.
Zarr V3 status update
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
{ | |
"cells": [ | |
{ | |
"cell_type": "code", | |
"execution_count": 1, | |
"id": "18b69086-3380-418f-bbae-71872f6bfb96", | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"from zarr.v3 import Array, Group\n", | |
"from zarr.v3.store import LocalStore\n", | |
"\n", | |
"import numpy as np" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 2, | |
"id": "d3331872-e0f2-46c9-b47e-806ab1ba5f65", | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"!rm -r /Users/jhamman/workdir/demo\n", | |
"store = LocalStore(\"/Users/jhamman/workdir/demo\", )" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 3, | |
"id": "51b6a217-b7cb-43cf-832f-f53604b5c11b", | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"root_group = Group.create(store, attributes={\"title\": \"Demo root group\"})\n", | |
"foo_group = root_group.create_group(\"foo\", attributes={\"title\": \"foo group!\"})\n", | |
"bar_array = foo_group.create_array(\"bar\", shape=(10, 10), dtype=\"int16\", chunk_shape=(2, 2))" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 4, | |
"id": "ab9f9edd-04a8-4ff0-8cc9-0055dc01eccf", | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"\u001b[1;36m/Users/jhamman/workdir/demo/\u001b[0m\n", | |
"├── \u001b[1;36mfoo\u001b[0m\n", | |
"│ ├── \u001b[1;36mbar\u001b[0m\n", | |
"│ │ └── zarr.json\n", | |
"│ └── zarr.json\n", | |
"└── zarr.json\n", | |
"\n", | |
"3 directories, 3 files\n" | |
] | |
} | |
], | |
"source": [ | |
"!tree /Users/jhamman/workdir/demo/" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 5, | |
"id": "e57ab102-121d-4bb8-93c7-77ddc0a1bb8f", | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"bar_array[:] = np.random.randint(0, 100, size=(10, 10))" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 6, | |
"id": "c198a9a0-52dc-44e8-9fa9-52d43a206001", | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"\u001b[1;36m/Users/jhamman/workdir/demo/\u001b[0m\n", | |
"├── \u001b[1;36mfoo\u001b[0m\n", | |
"│ ├── \u001b[1;36mbar\u001b[0m\n", | |
"│ │ ├── \u001b[1;36mc\u001b[0m\n", | |
"│ │ │ ├── \u001b[1;36m0\u001b[0m\n", | |
"│ │ │ │ ├── 0\n", | |
"│ │ │ │ ├── 1\n", | |
"│ │ │ │ ├── 2\n", | |
"│ │ │ │ ├── 3\n", | |
"│ │ │ │ └── 4\n", | |
"│ │ │ ├── \u001b[1;36m1\u001b[0m\n", | |
"│ │ │ │ ├── 0\n", | |
"│ │ │ │ ├── 1\n", | |
"│ │ │ │ ├── 2\n", | |
"│ │ │ │ ├── 3\n", | |
"│ │ │ │ └── 4\n", | |
"│ │ │ ├── \u001b[1;36m2\u001b[0m\n", | |
"│ │ │ │ ├── 0\n", | |
"│ │ │ │ ├── 1\n", | |
"│ │ │ │ ├── 2\n", | |
"│ │ │ │ ├── 3\n", | |
"│ │ │ │ └── 4\n", | |
"│ │ │ ├── \u001b[1;36m3\u001b[0m\n", | |
"│ │ │ │ ├── 0\n", | |
"│ │ │ │ ├── 1\n", | |
"│ │ │ │ ├── 2\n", | |
"│ │ │ │ ├── 3\n", | |
"│ │ │ │ └── 4\n", | |
"│ │ │ └── \u001b[1;36m4\u001b[0m\n", | |
"│ │ │ ├── 0\n", | |
"│ │ │ ├── 1\n", | |
"│ │ │ ├── 2\n", | |
"│ │ │ ├── 3\n", | |
"│ │ │ └── 4\n", | |
"│ │ └── zarr.json\n", | |
"│ └── zarr.json\n", | |
"└── zarr.json\n", | |
"\n", | |
"9 directories, 28 files\n" | |
] | |
} | |
], | |
"source": [ | |
"!tree /Users/jhamman/workdir/demo/" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"id": "70d78c6a-3834-4f03-9eb2-b09562e14911", | |
"metadata": {}, | |
"outputs": [], | |
"source": [] | |
} | |
], | |
"metadata": { | |
"kernelspec": { | |
"display_name": "Python 3 (ipykernel)", | |
"language": "python", | |
"name": "python3" | |
}, | |
"language_info": { | |
"codemirror_mode": { | |
"name": "ipython", | |
"version": 3 | |
}, | |
"file_extension": ".py", | |
"mimetype": "text/x-python", | |
"name": "python", | |
"nbconvert_exporter": "python", | |
"pygments_lexer": "ipython3", | |
"version": "3.11.6" | |
} | |
}, | |
"nbformat": 4, | |
"nbformat_minor": 5 | |
} |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment