khrm

USER       PID %CPU %MEM    VSZ   RSS TTY      STAT START   TIME COMMAND
root         1  0.0  0.0  19468   368 ?        Ss   04:42   0:00 /sbin/init
root         2  0.0  0.0      0     0 ?        S    04:42   0:00 [kthreadd]
root         3  0.1  0.0      0     0 ?        S    04:42   0:09 [ksoftirqd/0]
root         4  0.0  0.0      0     0 ?        S    04:42   0:00 [migration/0]
root         5  0.0  0.0      0     0 ?        S    04:42   0:00 [watchdog/0]
root         6  0.0  0.0      0     0 ?        S    04:42   0:00 [migration/1]
root         7  0.0  0.0      0     0 ?        S    04:42   0:01 [ksoftirqd/1]
root         8  0.0  0.0      0     0 ?        S    04:42   0:00 [watchdog/1]
root         9  0.0  0.0      0     0 ?        S    04:42   0:00 [events/0]

khrm

make  all-recursive
make[1]: Entering directory `/home/khrm/SonATA'
Making all in tclreadline
make[2]: Entering directory `/home/khrm/SonATA/tclreadline'
make  all-am
make[3]: Entering directory `/home/khrm/SonATA/tclreadline'
/bin/sh ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I/usr/include -I/usr/include/readline    -g -O2 -MT tclreadline.lo -MD -MP -MF .deps/tclreadline.Tpo -c -o tclreadline.lo tclreadline.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I/usr/include -I/usr/include/readline -g -O2 -MT tclreadline.lo -MD -MP -MF .deps/tclreadline.Tpo -c tclreadline.c  -fPIC -DPIC -o .libs/tclreadline.o
mv -f .deps/tclreadline.Tpo .deps/tclreadline.Plo
/bin/sh ./libtool --tag=CC   --mode=link gcc  -g -O2 -release 9.9.0  -o libtclreadline.la -rpath /usr/local/lib tclreadline.lo  -lreadline  -lncurses

khrm

make  all-recursive
make[1]: Entering directory `/home/khrm/SonATA'
Making all in tclreadline
make[2]: Entering directory `/home/khrm/SonATA/tclreadline'
make  all-am
make[3]: Entering directory `/home/khrm/SonATA/tclreadline'
/bin/sh ./libtool --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I/usr/include -I/usr/include/readline    -g -O2 -MT tclreadline.lo -MD -MP -MF .deps/tclreadline.Tpo -c -o tclreadline.lo tclreadline.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I/usr/include -I/usr/include/readline -g -O2 -MT tclreadline.lo -MD -MP -MF .deps/tclreadline.Tpo -c tclreadline.c  -fPIC -DPIC -o .libs/tclreadline.o
mv -f .deps/tclreadline.Tpo .deps/tclreadline.Plo
/bin/sh ./libtool --tag=CC   --mode=link gcc  -g -O2 -release 9.9.0  -o libtclreadline.la -rpath /usr/local/lib tclreadline.lo  -lreadline  -lncurses

khrm

#!/bin/sh
cat > wje_q.c <<EOD
#include <errno.h>
#include <pthread.h>
#include <sched.h>
#include <stdio.h>
#include <stdlib.h>

void *second_thread_run_function(void *arg)
{

khrm

2011-07-12 17:52:22 UTC tscope1: Connecting to seeker.
2011-07-12 17:52:22 UTC arch2: DxArchiver::requestArchiverStatus
2011-07-12 17:52:22 UTC arch1: DxArchiver::requestArchiverStatus
2011-07-12 17:52:22 UTC ifc2: Command: [eval ifc intrinsics]
2011-07-12 17:52:22 UTC ifc1: Command: [eval ifc intrinsics]
2011-07-12 17:52:22 UTC ifc1: Result: Ifc Intrinsics
2011-07-12 17:52:22 UTC ifc1: name = ifc1
2011-07-12 17:52:22 UTC ifc2: Result: Ifc Intrinsics
2011-07-12 17:52:22 UTC ifc1: version = 4.2
2011-07-12 17:52:22 UTC ifc2: name = ifc2

khrm

#!/bin/bash
####################################################################################
#
# File   : sonata_i.sh
# Project: SonATA
# Authors: The SonATA code is the result of many programmers
#          over many years
#
# Copyright 2011 The SETI Institute
#

khrm

*** glibc detected *** /home/khrm/sonata_install/bin/seeker: munmap_chunk(): invalid pointer: 0x000000000097aac0 ***
======= Backtrace: =========
/lib/libc.so.6(+0x71ad6)[0x2aaaace9aad6]
/home/khrm/sonata_install/bin/seeker[0x40c58d]
/home/khrm/sonata_install/bin/seeker[0x40d9a0]
/home/khrm/sonata_install/bin/seeker[0x40e1f9]
/home/khrm/sonata_install/bin/seeker[0x40e219]
/home/khrm/sonata_install/bin/seeker[0x4fdd4a]
/home/khrm/sonata_install/bin/seeker[0x50143f]
/home/khrm/sonata_install/bin/seeker[0x4259b6]

khrm

#0  0x00002aaaace5b165 in *__GI_raise (sig=<value optimized out>) at ../nptl/sysdeps/unix/sysv/linux/raise.c:64
#1  0x00002aaaace5df70 in *__GI_abort () at abort.c:92
#2  0x00002aaaace9127b in __libc_message (do_abort=<value optimized out>, fmt=<value optimized out>) at ../sysdeps/unix/sysv/linux/libc_fatal.c:189
#3  0x00002aaaace9aad6 in malloc_printerr (action=3, str=0x2aaaacf519f0 "munmap_chunk(): invalid pointer", ptr=<value optimized out>) at malloc.c:6267
#4  0x000000000040c58d in readMask (freqBandList=..., maskFileName=..., numberOfFreqBands=<value optimized out>, maskVersionDate=0x10, bandCovered=0x2aaaad7c8028)
    at readMask.cpp:135
#5  0x000000000040d9a0 in SignalMask (this=0x2aaaad7c8010, maskFilename=..., maskType=..., verboseLevel=2) at SignalMask.cpp:62
#6  0x000000000040e1f9 in DxSignalMask (this=0x77b6, maskFilename=..., maskType=..., verboseLevel=-1) at SignalMask.cpp:113
#7  0x000000000040e219 in PermRfiMask (this=0x77b6, maskFilename=..., maskType=..., verboseLevel=-1) at SignalMask.cpp:

khrm

==30655== Memcheck, a memory error detector
==30655== Copyright (C) 2002-2010, and GNU GPL'd, by Julian Seward et al.
==30655== Using Valgrind-3.6.0.SVN-Debian and LibVEX; rerun with -h for copyright info
==30655== Command: seeker
==30655== 
Loading 'expected components' config file: /home/khrm/sonata_install/setup//expectedSonATAComponents.cfg
Using ~/sonata_install/scripts/sserc.tcl
seeker>> ==30655== Thread 2:
==30655== Invalid free() / delete / delete[]
==30655==    at 0x4C240FD: free (vg_replace_malloc.c:366)

khrm

#!/bin/bash
####################################################################################
#
# File : deb_preins.sh
# Project: SonATA
# Authors: The SonATA code is the result of many programmers
# over many years
#
# Copyright 2011 The SETI Institute
#