kilir

function [gkam, gid, kam] = gKAM(ebsd,varargin)
% calculate grain average misorientation angle from KAM
% input:
%      ebsd (with grainID)
% 
%   options:
%      threshold:    angles to ignore (upper limit) in radian 
%      lowlim:       angles to ignore: (lower limit) in radian
%      order:        1st,2nd etc. neighbourhood around each point
% 

kilir

%% select profile
lineX = ginput(2) % select a line
[ebsd_lineX, dist ]= spatialProfile(ebsd,lineX); %extract orientations

%%  average orientations perpendicular to profile and plot things along line
clear meanO
% average along line (put 0 if you want no averaging)
%//////////////////////////////////////////////////////
av_width = 8 %number of pixels to average perp to line (towards both sides
% use 0 to use only ebsd_lineX

kilir

function saveFigure(fname,varargin)
% save figure as graphics file
%
% Description
% This function is supposed to produce cropped, publication ready image
% files from your plots. The format of the file is determined by the
% extension of the filename. 
%
% Syntax
%   saveFigure(fname)